RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 TMEM97Q5BJF2 176 aa13.66□□□□□ -0.22
DNMT1-216ENST00000588952 Q8N3U1 123 aa13.66□□□□□ -0.22
DNMT1-216ENST00000588952 IGHV1-24A0A0C4DH33 117 aa13.65□□□□□ -0.22
DNMT1-216ENST00000588952 CHCHD7Q9BUK0 85 aa13.65□□□□□ -0.22
DNMT1-216ENST00000588952 KMT2AQ03164 3969 aa13.64□□□□□ -0.23
DNMT1-216ENST00000588952 KMT2CQ8NEZ4 4911 aaKnown RBP13.64□□□□□ -0.23
DNMT1-216ENST00000588952 TRBV25-1A0A075B6N4 114 aa13.64□□□□□ -0.23
DNMT1-216ENST00000588952 TRAV8-6A0A0B4J262 113 aa13.64□□□□□ -0.23
DNMT1-216ENST00000588952 LCE6AA0A183 80 aa13.64□□□□□ -0.23
DNMT1-216ENST00000588952 TCAPO15273 167 aa13.64□□□□□ -0.23
DNMT1-216ENST00000588952 IFI27P40305 119 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-216ENST00000588952 AMTP48728 403 aa13.64□□□□□ -0.23
DNMT1-216ENST00000588952 Q8N8P6 123 aa13.64□□□□□ -0.23
DNMT1-216ENST00000588952 C18orf32Q8TCD1 76 aa13.64□□□□□ -0.23
DNMT1-216ENST00000588952 KIR2DL4Q99706 377 aa13.63□□□□□ -0.23
DNMT1-216ENST00000588952 TMEM243Q9BU79 118 aa13.63□□□□□ -0.23
DNMT1-216ENST00000588952 Q9H8V8 135 aa13.63□□□□□ -0.23
DNMT1-216ENST00000588952 SIVA1O15304 175 aa13.62□□□□□ -0.23
DNMT1-216ENST00000588952 ESDP10768 282 aa13.62□□□□□ -0.23
DNMT1-216ENST00000588952 FCER1GP30273 86 aa13.62□□□□□ -0.23
DNMT1-216ENST00000588952 GAGE6Q13070 117 aa13.62□□□□□ -0.23
DNMT1-216ENST00000588952 NIT1Q86X76 327 aa13.62□□□□□ -0.23
DNMT1-216ENST00000588952 CHCHD5Q9BSY4 110 aa13.62□□□□□ -0.23
DNMT1-216ENST00000588952 HYDINQ4G0P3 5121 aa13.62□□□□□ -0.23
DNMT1-216ENST00000588952 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-216ENST00000588952 IGKV2-29A2NJV5 120 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-216ENST00000588952 DNAH10OSP0CZ25 163 aa13.6□□□□□ -0.23
DNMT1-216ENST00000588952 URB1-AS1Q96HZ7 61 aa13.6□□□□□ -0.23
DNMT1-216ENST00000588952 NXT2Q9NPJ8 142 aaKnown RBP13.6□□□□□ -0.23
DNMT1-216ENST00000588952 IGHV3-30P01768 117 aa13.59□□□□□ -0.23
DNMT1-216ENST00000588952 IGHV3-33P01772 117 aa13.59□□□□□ -0.23
DNMT1-216ENST00000588952 IGHV3-30-3P0DP02 117 aa13.59□□□□□ -0.23
DNMT1-216ENST00000588952 IGHV3-30-5P0DP03 117 aa13.59□□□□□ -0.23
DNMT1-216ENST00000588952 KRTAP1-5Q9BYS1 174 aa13.59□□□□□ -0.23
DNMT1-216ENST00000588952 MPV17L2Q567V2 206 aa13.58□□□□□ -0.24
DNMT1-216ENST00000588952 LINC01556Q5JQF7 62 aa13.58□□□□□ -0.24
DNMT1-216ENST00000588952 PRSS3P2Q8NHM4 247 aa13.58□□□□□ -0.24
DNMT1-216ENST00000588952 LINC01546A6NGU7 62 aa13.57□□□□□ -0.24
DNMT1-216ENST00000588952 TMEM262E9PQX1 116 aa13.57□□□□□ -0.24
DNMT1-216ENST00000588952 RYR2Q92736 4967 aa13.57□□□□□ -0.24
DNMT1-216ENST00000588952 Q8N976 141 aa13.56□□□□□ -0.24
DNMT1-216ENST00000588952 C20orf203Q8NBC4 194 aa13.56□□□□□ -0.24
DNMT1-216ENST00000588952 UBE2L6O14933 153 aa13.55□□□□□ -0.24
DNMT1-216ENST00000588952 RBX1P62877 108 aa13.55□□□□□ -0.24
DNMT1-216ENST00000588952 RPL39P62891 51 aaKnown RBP13.55□□□□□ -0.24
DNMT1-216ENST00000588952 LAGE3Q14657 143 aa13.55□□□□□ -0.24
DNMT1-216ENST00000588952 IGLV4-60A0A075B6I1 120 aa13.54□□□□□ -0.24
DNMT1-216ENST00000588952 NBDYA0A0U1RRE5 68 aa13.54□□□□□ -0.24
DNMT1-216ENST00000588952 M0R2N4 97 aa13.54□□□□□ -0.24
DNMT1-216ENST00000588952 FGF6P10767 208 aa13.54□□□□□ -0.24
DNMT1-216ENST00000588952 FA2HQ7L5A8 372 aa13.54□□□□□ -0.24
DNMT1-216ENST00000588952 A0A087WX48 190 aa13.53□□□□□ -0.24
DNMT1-216ENST00000588952 Q0VG73 95 aa13.53□□□□□ -0.24
DNMT1-216ENST00000588952 Q6ZR54 194 aa13.53□□□□□ -0.24
DNMT1-216ENST00000588952 H7C423 109 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 K7EMI3 77 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 HIST1H2BKO60814 126 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 HIST1H2BJP06899 126 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 LINC00614P0C842 121 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 HIST1H2BOP23527 126 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 HIST1H2BBP33778 126 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 HIST1H2BDP58876 126 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 LINC00310P59036 64 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 HIST1H2BCP62807 126 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 HIST2H2BEQ16778 126 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 ORMDL2Q53FV1 153 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.52□□□□□ -0.25
DNMT1-216ENST00000588952 HIST1H2BHQ93079 126 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 HIST1H2BNQ99877 126 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 HIST1H2BMQ99879 126 aa13.52□□□□□ -0.25
DNMT1-216ENST00000588952 PKIAP61925 76 aa13.51□□□□□ -0.25
DNMT1-216ENST00000588952 RNASEKQ6P5S7 137 aaKnown RBP13.51□□□□□ -0.25
DNMT1-216ENST00000588952 UBE2D4Q9Y2X8 147 aa13.51□□□□□ -0.25
DNMT1-216ENST00000588952 A0A1B0GUV1 79 aa13.5□□□□□ -0.25
DNMT1-216ENST00000588952 MRPL52Q86TS9 123 aaKnown RBP13.5□□□□□ -0.25
DNMT1-216ENST00000588952 AP5S1Q9NUS5 200 aa13.5□□□□□ -0.25
DNMT1-216ENST00000588952 KLK12Q9UKR0 248 aa13.5□□□□□ -0.25
DNMT1-216ENST00000588952 A0A096LNJ9 63 aa13.49□□□□□ -0.25
DNMT1-216ENST00000588952 BTF3P20290 206 aaKnown RBP13.49□□□□□ -0.25
DNMT1-216ENST00000588952 PMCHL1Q16048 86 aa13.49□□□□□ -0.25
DNMT1-216ENST00000588952 AMMECR1LQ6DCA0 310 aa13.49□□□□□ -0.25
DNMT1-216ENST00000588952 C2orf66Q6UXQ4 117 aa13.49□□□□□ -0.25
DNMT1-216ENST00000588952 BAGE3Q86Y29 109 aa13.49□□□□□ -0.25
DNMT1-216ENST00000588952 FAM104AQ969W3 186 aa13.49□□□□□ -0.25
DNMT1-216ENST00000588952 DNAH2Q9P225 4427 aa13.49□□□□□ -0.25
DNMT1-216ENST00000588952 ANGP03950 147 aaKnown RBP13.48□□□□□ -0.25
DNMT1-216ENST00000588952 RAB5BP61020 215 aa13.48□□□□□ -0.25
DNMT1-216ENST00000588952 TTC32Q5I0X7 151 aa13.48□□□□□ -0.25
DNMT1-216ENST00000588952 C1orf196B1AJZ1 125 aa13.47□□□□□ -0.25
DNMT1-216ENST00000588952 IBA57-AS1B1ANH7 110 aa13.47□□□□□ -0.25
DNMT1-216ENST00000588952 NUPR1O60356 82 aa13.47□□□□□ -0.25
DNMT1-216ENST00000588952 SERF1AO75920 110 aa13.47□□□□□ -0.25
DNMT1-216ENST00000588952 ZNF25P17030 456 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-216ENST00000588952 CLPSL2Q6UWE3 100 aa13.47□□□□□ -0.25
DNMT1-216ENST00000588952 TMEM18Q96B42 140 aa13.47□□□□□ -0.25
DNMT1-216ENST00000588952 OPRPNQ99935 248 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-216ENST00000588952 CYSLTR1Q9Y271 337 aa13.47□□□□□ -0.25
DNMT1-216ENST00000588952 TRAV9-2A0A087WT02 112 aa13.46□□□□□ -0.25
DNMT1-216ENST00000588952 Q6ZUT4 128 aa13.46□□□□□ -0.25
DNMT1-216ENST00000588952 LINC00269Q8N2A0 174 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms