RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 LGALS9CQ6DKI2 356 aa11.69□□□□□ -0.54
SCAMP4-211ENST00000588907 C18orf32Q8TCD1 76 aa11.69□□□□□ -0.54
SCAMP4-211ENST00000588907 IGLV2-18A0A075B6J9 118 aa11.68□□□□□ -0.54
SCAMP4-211ENST00000588907 C1orf196B1AJZ1 125 aa11.68□□□□□ -0.54
SCAMP4-211ENST00000588907 H7C423 109 aa11.68□□□□□ -0.54
SCAMP4-211ENST00000588907 TSHBP01222 138 aa11.68□□□□□ -0.54
SCAMP4-211ENST00000588907 ORMDL2Q53FV1 153 aa11.68□□□□□ -0.54
SCAMP4-211ENST00000588907 FA2HQ7L5A8 372 aa11.68□□□□□ -0.54
SCAMP4-211ENST00000588907 TMEM18Q96B42 140 aa11.68□□□□□ -0.54
SCAMP4-211ENST00000588907 TMEM243Q9BU79 118 aa11.68□□□□□ -0.54
SCAMP4-211ENST00000588907 IFI27P40305 119 aaPredicted RBP11.67□□□□□ -0.54
SCAMP4-211ENST00000588907 Q0VG73 95 aa11.67□□□□□ -0.54
SCAMP4-211ENST00000588907 LINC00588Q9Y4M8 146 aa11.67□□□□□ -0.54
SCAMP4-211ENST00000588907 LINC01546A6NGU7 62 aa11.66□□□□□ -0.54
SCAMP4-211ENST00000588907 LINC01549A6NIU2 74 aa11.66□□□□□ -0.54
SCAMP4-211ENST00000588907 UBE2L6O14933 153 aa11.66□□□□□ -0.54
SCAMP4-211ENST00000588907 NTM-AS1Q6ZSK4 140 aa11.66□□□□□ -0.54
SCAMP4-211ENST00000588907 CHCHD7Q9BUK0 85 aa11.66□□□□□ -0.54
SCAMP4-211ENST00000588907 AP5S1Q9NUS5 200 aa11.66□□□□□ -0.54
SCAMP4-211ENST00000588907 K7EP13 123 aa11.65□□□□□ -0.54
SCAMP4-211ENST00000588907 LAGE3Q14657 143 aa11.65□□□□□ -0.54
SCAMP4-211ENST00000588907 CHCHD5Q9BSY4 110 aa11.65□□□□□ -0.54
SCAMP4-211ENST00000588907 LINC00614P0C842 121 aa11.64□□□□□ -0.55
SCAMP4-211ENST00000588907 ESDP10768 282 aa11.64□□□□□ -0.55
SCAMP4-211ENST00000588907 BAGE3Q86Y29 109 aa11.64□□□□□ -0.55
SCAMP4-211ENST00000588907 CHCHD1Q96BP2 118 aaKnown RBP11.64□□□□□ -0.55
SCAMP4-211ENST00000588907 ALMS1Q8TCU4 4167 aa11.64□□□□□ -0.55
SCAMP4-211ENST00000588907 TENM2Q9NT68 2774 aa11.64□□□□□ -0.55
SCAMP4-211ENST00000588907 SIVA1O15304 175 aa11.63□□□□□ -0.55
SCAMP4-211ENST00000588907 LYSTQ99698 3801 aa11.63□□□□□ -0.55
SCAMP4-211ENST00000588907 A0A087WX48 190 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 HIST1H2BKO60814 126 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 HIST1H2BJP06899 126 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 ZNF25P17030 456 aaPredicted RBP11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 HIST1H2BOP23527 126 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 HIST1H2BBP33778 126 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 HIST1H2BDP58876 126 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 HIST1H2BCP62807 126 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 HIST2H2BEQ16778 126 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 LINC01556Q5JQF7 62 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 LINC00476Q8WZB0 136 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 HIST1H2BHQ93079 126 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 HIST1H2BNQ99877 126 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 HIST1H2BMQ99879 126 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 VPS13DQ5THJ4 4388 aa11.62□□□□□ -0.55
SCAMP4-211ENST00000588907 TRAV9-2A0A087WT02 112 aa11.61□□□□□ -0.55
SCAMP4-211ENST00000588907 DNAH10OSP0CZ25 163 aa11.61□□□□□ -0.55
SCAMP4-211ENST00000588907 RNASEKQ6P5S7 137 aaKnown RBP11.61□□□□□ -0.55
SCAMP4-211ENST00000588907 NIT1Q86X76 327 aa11.61□□□□□ -0.55
SCAMP4-211ENST00000588907 C20orf203Q8NBC4 194 aa11.61□□□□□ -0.55
SCAMP4-211ENST00000588907 DNAH1Q9P2D7 4330 aa11.61□□□□□ -0.55
SCAMP4-211ENST00000588907 TMEM262E9PQX1 116 aa11.6□□□□□ -0.55
SCAMP4-211ENST00000588907 AMMECR1LQ6DCA0 310 aa11.6□□□□□ -0.55
SCAMP4-211ENST00000588907 WFDC10BQ8IUB3 73 aa11.6□□□□□ -0.55
SCAMP4-211ENST00000588907 C10orf126Q8N4M7 172 aa11.6□□□□□ -0.55
SCAMP4-211ENST00000588907 Q9H8V8 135 aa11.6□□□□□ -0.55
SCAMP4-211ENST00000588907 CYSLTR1Q9Y271 337 aa11.6□□□□□ -0.55
SCAMP4-211ENST00000588907 A0A1B0GUV1 79 aa11.59□□□□□ -0.55
SCAMP4-211ENST00000588907 TTC32Q5I0X7 151 aa11.59□□□□□ -0.55
SCAMP4-211ENST00000588907 MRPL52Q86TS9 123 aaKnown RBP11.59□□□□□ -0.55
SCAMP4-211ENST00000588907 TMEM101Q96IK0 257 aa11.59□□□□□ -0.55
SCAMP4-211ENST00000588907 TIMM21Q9BVV7 248 aa11.59□□□□□ -0.55
SCAMP4-211ENST00000588907 SPANXA1Q9NS26 97 aa11.59□□□□□ -0.55
SCAMP4-211ENST00000588907 CSDC2Q9Y534 153 aaKnown RBP11.59□□□□□ -0.55
SCAMP4-211ENST00000588907 HSBP1O75506 76 aa11.58□□□□□ -0.56
SCAMP4-211ENST00000588907 LY6G6CO95867 125 aa11.58□□□□□ -0.56
SCAMP4-211ENST00000588907 NPSP0C0P6 89 aa11.58□□□□□ -0.56
SCAMP4-211ENST00000588907 BTF3P20290 206 aaKnown RBP11.58□□□□□ -0.56
SCAMP4-211ENST00000588907 GAGE6Q13070 117 aa11.58□□□□□ -0.56
SCAMP4-211ENST00000588907 DEFB104AQ8WTQ1 72 aa11.58□□□□□ -0.56
SCAMP4-211ENST00000588907 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.57□□□□□ -0.56
SCAMP4-211ENST00000588907 IGKV2-29A2NJV5 120 aaPredicted RBP11.57□□□□□ -0.56
SCAMP4-211ENST00000588907 FGF6P10767 208 aa11.57□□□□□ -0.56
SCAMP4-211ENST00000588907 C2orf66Q6UXQ4 117 aa11.57□□□□□ -0.56
SCAMP4-211ENST00000588907 DNAH6Q9C0G6 4158 aa11.56□□□□□ -0.56
SCAMP4-211ENST00000588907 HBDP02042 147 aa11.56□□□□□ -0.56
SCAMP4-211ENST00000588907 COA6Q5JTJ3 125 aaKnown RBP11.56□□□□□ -0.56
SCAMP4-211ENST00000588907 DGAT2L7PQ6IED9 249 aa11.56□□□□□ -0.56
SCAMP4-211ENST00000588907 OR5A1Q8NGJ0 315 aa11.56□□□□□ -0.56
SCAMP4-211ENST00000588907 TOMM6Q96B49 74 aa11.56□□□□□ -0.56
SCAMP4-211ENST00000588907 URB1-AS1Q96HZ7 61 aa11.56□□□□□ -0.56
SCAMP4-211ENST00000588907 PYGO1Q9Y3Y4 419 aa11.56□□□□□ -0.56
SCAMP4-211ENST00000588907 SERF1AO75920 110 aa11.55□□□□□ -0.56
SCAMP4-211ENST00000588907 RBX1P62877 108 aa11.55□□□□□ -0.56
SCAMP4-211ENST00000588907 MPV17L2Q567V2 206 aa11.55□□□□□ -0.56
SCAMP4-211ENST00000588907 PAPPA-AS1Q5QFB9 102 aa11.55□□□□□ -0.56
SCAMP4-211ENST00000588907 UBE2D4Q9Y2X8 147 aa11.55□□□□□ -0.56
SCAMP4-211ENST00000588907 TIMM17AQ99595 171 aa11.54□□□□□ -0.56
SCAMP4-211ENST00000588907 RPL39P62891 51 aaKnown RBP11.53□□□□□ -0.56
SCAMP4-211ENST00000588907 MRPS36P82909 103 aaKnown RBP11.53□□□□□ -0.56
SCAMP4-211ENST00000588907 LCE6AA0A183 80 aa11.52□□□□□ -0.57
SCAMP4-211ENST00000588907 IGHV3-30P01768 117 aa11.52□□□□□ -0.57
SCAMP4-211ENST00000588907 IGHV3-33P01772 117 aa11.52□□□□□ -0.57
SCAMP4-211ENST00000588907 ANGP03950 147 aaKnown RBP11.52□□□□□ -0.57
SCAMP4-211ENST00000588907 S100A6P06703 90 aa11.52□□□□□ -0.57
SCAMP4-211ENST00000588907 IGHV3-30-3P0DP02 117 aa11.52□□□□□ -0.57
SCAMP4-211ENST00000588907 IGHV3-30-5P0DP03 117 aa11.52□□□□□ -0.57
SCAMP4-211ENST00000588907 Q6ZN92 141 aa11.52□□□□□ -0.57
SCAMP4-211ENST00000588907 ERASQ7Z444 233 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms