RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC2-211	ENST00000588652	SETD2	Q9BYW2	2564 aa	Predicted RBP	12.81	□□□□□ -0.36
ERCC2-211	ENST00000588652	PGPEP1	Q9NXJ5	209 aa		12.81	□□□□□ -0.36
ERCC2-211	ENST00000588652	TRAV25	A0A0B4J276	109 aa		12.8	□□□□□ -0.36
ERCC2-211	ENST00000588652	NFE4	Q86UQ8	179 aa		12.8	□□□□□ -0.36
ERCC2-211	ENST00000588652	C20orf203	Q8NBC4	194 aa		12.8	□□□□□ -0.36
ERCC2-211	ENST00000588652	C16orf95	Q9H693	158 aa		12.8	□□□□□ -0.36
ERCC2-211	ENST00000588652	MRPL16	Q9NX20	251 aa	Known RBP	12.8	□□□□□ -0.36
ERCC2-211	ENST00000588652	ODF3L2	Q3SX64	289 aa		12.8	□□□□□ -0.36
ERCC2-211	ENST00000588652	SPANXB1	Q9NS25	103 aa	Predicted RBP	12.8	□□□□□ -0.36
ERCC2-211	ENST00000588652	LGALS3	P17931	250 aa	Known RBP	12.79	□□□□□ -0.36
ERCC2-211	ENST00000588652	AMELX	Q99217	191 aa		12.79	□□□□□ -0.36
ERCC2-211	ENST00000588652	TSSC4	Q9Y5U2	329 aa	Predicted RBP	12.79	□□□□□ -0.36
ERCC2-211	ENST00000588652	PRO0461	Q9UI25	63 aa		12.79	□□□□□ -0.36
ERCC2-211	ENST00000588652		J3QQQ9	107 aa		12.78	□□□□□ -0.36
ERCC2-211	ENST00000588652	GAGE13	Q4V321	117 aa		12.78	□□□□□ -0.36
ERCC2-211	ENST00000588652	VCX2	Q9H322	139 aa		12.77	□□□□□ -0.37
ERCC2-211	ENST00000588652	NACA	E9PAV3	2078 aa		12.77	□□□□□ -0.37
ERCC2-211	ENST00000588652		M0R2P5	195 aa		12.77	□□□□□ -0.37
ERCC2-211	ENST00000588652	TSPAN13	O95857	204 aa		12.77	□□□□□ -0.37
ERCC2-211	ENST00000588652	ZNF415	Q09FC8	603 aa		12.77	□□□□□ -0.37
ERCC2-211	ENST00000588652	LINC01587	Q99440	93 aa		12.77	□□□□□ -0.37
ERCC2-211	ENST00000588652	INS	P01308	110 aa		12.76	□□□□□ -0.37
ERCC2-211	ENST00000588652	MTURN	Q8N3F0	131 aa		12.76	□□□□□ -0.37
ERCC2-211	ENST00000588652	SLC25A29	Q8N8R3	303 aa		12.76	□□□□□ -0.37
ERCC2-211	ENST00000588652	LINC00467	Q9BRT7	94 aa		12.76	□□□□□ -0.37
ERCC2-211	ENST00000588652	EDA2R	Q9HAV5	297 aa		12.76	□□□□□ -0.37
ERCC2-211	ENST00000588652	IGHV3-73	A0A0B4J1V6	119 aa		12.76	□□□□□ -0.37
ERCC2-211	ENST00000588652	TMEM223	A0PJW6	202 aa		12.76	□□□□□ -0.37
ERCC2-211	ENST00000588652		A8MWV9	139 aa		12.76	□□□□□ -0.37
ERCC2-211	ENST00000588652	APOM	O95445	188 aa		12.76	□□□□□ -0.37
ERCC2-211	ENST00000588652	IGHV3-30	P01768	117 aa		12.76	□□□□□ -0.37
ERCC2-211	ENST00000588652	IGHV3-30-5	P0DP03	117 aa		12.76	□□□□□ -0.37
ERCC2-211	ENST00000588652	PIK3CD-AS1	Q5SR53	167 aa		12.76	□□□□□ -0.37
ERCC2-211	ENST00000588652	FASN	P49327	2511 aa	Known RBP	12.75	□□□□□ -0.37
ERCC2-211	ENST00000588652	IGLV4-3	A0A075B6K6	122 aa		12.75	□□□□□ -0.37
ERCC2-211	ENST00000588652	LEPROT	O15243	131 aa		12.75	□□□□□ -0.37
ERCC2-211	ENST00000588652	C11orf72	Q8NBR9	251 aa		12.75	□□□□□ -0.37
ERCC2-211	ENST00000588652	TNFRSF18	Q9Y5U5	241 aa		12.75	□□□□□ -0.37
ERCC2-211	ENST00000588652		J3QR89	54 aa		12.74	□□□□□ -0.37
ERCC2-211	ENST00000588652	HILS1	P60008	231 aa		12.74	□□□□□ -0.37
ERCC2-211	ENST00000588652	SH2D6	Q7Z4S9	175 aa		12.74	□□□□□ -0.37
ERCC2-211	ENST00000588652	ZNF418	Q8TF45	676 aa	Predicted RBP	12.74	□□□□□ -0.37
ERCC2-211	ENST00000588652	ZNF22	P17026	224 aa	Predicted RBP	12.74	□□□□□ -0.37
ERCC2-211	ENST00000588652	PROK1	P58294	105 aa		12.74	□□□□□ -0.37
ERCC2-211	ENST00000588652	ETDB	Q3ZM63	59 aa		12.74	□□□□□ -0.37
ERCC2-211	ENST00000588652	NDUFA11	Q86Y39	141 aa		12.74	□□□□□ -0.37
ERCC2-211	ENST00000588652	STH	Q8IWL8	128 aa		12.74	□□□□□ -0.37
ERCC2-211	ENST00000588652	PTH2	Q96A98	100 aa		12.73	□□□□□ -0.37
ERCC2-211	ENST00000588652	XCL2	Q9UBD3	114 aa		12.73	□□□□□ -0.37
ERCC2-211	ENST00000588652	LYRM7	Q5U5X0	104 aa		12.73	□□□□□ -0.37
ERCC2-211	ENST00000588652	NIPBL	Q6KC79	2804 aa	eCLIP	12.72	□□□□□ -0.37
ERCC2-211	ENST00000588652	LOC107984156	A0A0G2JMH3	177 aa		12.72	□□□□□ -0.37
ERCC2-211	ENST00000588652	RHOD	O00212	210 aa		12.72	□□□□□ -0.37
ERCC2-211	ENST00000588652	ARL17A	Q8IVW1	177 aa		12.72	□□□□□ -0.37
ERCC2-211	ENST00000588652	SMR3A	Q99954	134 aa		12.72	□□□□□ -0.37
ERCC2-211	ENST00000588652	PYGO1	Q9Y3Y4	419 aa		12.72	□□□□□ -0.37
ERCC2-211	ENST00000588652	GCN1	Q92616	2671 aa	Known RBP	12.72	□□□□□ -0.37
ERCC2-211	ENST00000588652		A0A0J9YXV3	536 aa		12.72	□□□□□ -0.37
ERCC2-211	ENST00000588652	UBE2D3	P61077	147 aa		12.72	□□□□□ -0.37
ERCC2-211	ENST00000588652	UBE2D2	P62837	147 aa		12.72	□□□□□ -0.37
ERCC2-211	ENST00000588652	CFC1B	P0CG36	223 aa		12.71	□□□□□ -0.37
ERCC2-211	ENST00000588652	CFC1	P0CG37	223 aa		12.71	□□□□□ -0.37
ERCC2-211	ENST00000588652	FAM104A	Q969W3	186 aa		12.71	□□□□□ -0.37
ERCC2-211	ENST00000588652	CFAP126	Q5VTH2	177 aa		12.71	□□□□□ -0.38
ERCC2-211	ENST00000588652	SFTA2	Q6UW10	78 aa		12.71	□□□□□ -0.38
ERCC2-211	ENST00000588652	SPX	Q9BT56	116 aa		12.71	□□□□□ -0.38
ERCC2-211	ENST00000588652	IGHV3-64	A0A075B6Q5	118 aa		12.7	□□□□□ -0.38
ERCC2-211	ENST00000588652	HIVEP2	P31629	2446 aa		12.7	□□□□□ -0.38
ERCC2-211	ENST00000588652	PSMB2	P49721	201 aa		12.69	□□□□□ -0.38
ERCC2-211	ENST00000588652	CRYBA4	P53673	196 aa		12.69	□□□□□ -0.38
ERCC2-211	ENST00000588652	C1orf158	Q8N1D5	194 aa		12.69	□□□□□ -0.38
ERCC2-211	ENST00000588652	ADARB2-AS1	A8MUL3	147 aa		12.69	□□□□□ -0.38
ERCC2-211	ENST00000588652	AZU1	P20160	251 aa		12.69	□□□□□ -0.38
ERCC2-211	ENST00000588652	BEAN1	Q3B7T3	259 aa		12.69	□□□□□ -0.38
ERCC2-211	ENST00000588652		Q6ZSN1	163 aa		12.69	□□□□□ -0.38
ERCC2-211	ENST00000588652	NDUFA7	O95182	113 aa		12.68	□□□□□ -0.38
ERCC2-211	ENST00000588652	SMCP	P49901	116 aa	Predicted RBP	12.68	□□□□□ -0.38
ERCC2-211	ENST00000588652		Q9UF83	564 aa		12.68	□□□□□ -0.38
ERCC2-211	ENST00000588652	SETX	Q7Z333	2677 aa	Known RBP	12.68	□□□□□ -0.38
ERCC2-211	ENST00000588652	IGHV3OR16-12	A0A075B7B8	117 aa		12.67	□□□□□ -0.38
ERCC2-211	ENST00000588652	C10orf126	Q8N4M7	172 aa		12.67	□□□□□ -0.38
ERCC2-211	ENST00000588652	HECTD1	Q9ULT8	2610 aa		12.67	□□□□□ -0.38
ERCC2-211	ENST00000588652	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.67	□□□□□ -0.38
ERCC2-211	ENST00000588652	PRO1854	Q9UHT4	67 aa		12.67	□□□□□ -0.38
ERCC2-211	ENST00000588652	IGLV1-51	P01701	117 aa		12.66	□□□□□ -0.38
ERCC2-211	ENST00000588652	INSL3	P51460	131 aa		12.66	□□□□□ -0.38
ERCC2-211	ENST00000588652	TMEM238	C9JI98	176 aa		12.66	□□□□□ -0.38
ERCC2-211	ENST00000588652	MRPS36	P82909	103 aa	Known RBP	12.66	□□□□□ -0.38
ERCC2-211	ENST00000588652	DNAJC30	Q96LL9	226 aa		12.66	□□□□□ -0.38
ERCC2-211	ENST00000588652	TIMM21	Q9BVV7	248 aa		12.66	□□□□□ -0.38
ERCC2-211	ENST00000588652	JMJD1C	Q15652	2540 aa		12.65	□□□□□ -0.38
ERCC2-211	ENST00000588652	EIF4EBP3	O60516	100 aa	Predicted RBP	12.65	□□□□□ -0.38
ERCC2-211	ENST00000588652	IGHV3-53	P01767	116 aa		12.65	□□□□□ -0.38
ERCC2-211	ENST00000588652	CHCHD7	Q9BUK0	85 aa		12.65	□□□□□ -0.38
ERCC2-211	ENST00000588652	SPANXA1	Q9NS26	97 aa		12.65	□□□□□ -0.38
ERCC2-211	ENST00000588652		A4D1N5	150 aa		12.64	□□□□□ -0.39
ERCC2-211	ENST00000588652	RS1	O15537	224 aa		12.64	□□□□□ -0.39
ERCC2-211	ENST00000588652	TRBV20-1	A0A075B6N2	111 aa		12.64	□□□□□ -0.39
ERCC2-211	ENST00000588652	GAGE12H	A6NDE8	117 aa		12.64	□□□□□ -0.39
ERCC2-211	ENST00000588652	CIDEA	O60543	219 aa		12.64	□□□□□ -0.39

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