RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 IGHV3-38A0A0C4DH36 116 aa18.27■□□□□ 0.51
SCAMP4-210ENST00000588555 TOMM6Q96B49 74 aa18.27■□□□□ 0.51
SCAMP4-210ENST00000588555 C2orf66Q6UXQ4 117 aa18.25■□□□□ 0.51
SCAMP4-210ENST00000588555 SMIM6P0DI80 62 aa18.25■□□□□ 0.51
SCAMP4-210ENST00000588555 DAZ4Q86SG3 579 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-210ENST00000588555 B9D2Q9BPU9 175 aa18.25■□□□□ 0.51
SCAMP4-210ENST00000588555 DAZ3Q9NR90 486 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-210ENST00000588555 Q8N976 141 aa18.23■□□□□ 0.51
SCAMP4-210ENST00000588555 VSIG2Q96IQ7 327 aa18.23■□□□□ 0.51
SCAMP4-210ENST00000588555 ZMAT4Q9H898 229 aa18.23■□□□□ 0.51
SCAMP4-210ENST00000588555 COTL1Q14019 142 aa18.22■□□□□ 0.51
SCAMP4-210ENST00000588555 CYSLTR1Q9Y271 337 aa18.22■□□□□ 0.51
SCAMP4-210ENST00000588555 SYS1-DBNDD2H3BUS1 97 aa18.22■□□□□ 0.51
SCAMP4-210ENST00000588555 PAX4O43316 350 aa18.22■□□□□ 0.51
SCAMP4-210ENST00000588555 GYPEP15421 78 aa18.22■□□□□ 0.51
SCAMP4-210ENST00000588555 G0S2P27469 103 aa18.22■□□□□ 0.51
SCAMP4-210ENST00000588555 RPL39P62891 51 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-210ENST00000588555 C20orf203Q8NBC4 194 aa18.22■□□□□ 0.51
SCAMP4-210ENST00000588555 IFI27L1Q96BM0 104 aa18.22■□□□□ 0.51
SCAMP4-210ENST00000588555 MAP1LC3CQ9BXW4 147 aa18.22■□□□□ 0.51
SCAMP4-210ENST00000588555 F5H768 121 aa18.21■□□□□ 0.51
SCAMP4-210ENST00000588555 SPATA12Q7Z6I5 190 aa18.21■□□□□ 0.51
SCAMP4-210ENST00000588555 CHCHD7Q9BUK0 85 aa18.21■□□□□ 0.51
SCAMP4-210ENST00000588555 HTN3P15516 51 aa18.2■□□□□ 0.5
SCAMP4-210ENST00000588555 Q6ZTC4 211 aa18.2■□□□□ 0.5
SCAMP4-210ENST00000588555 LINC00518Q8N0U6 118 aa18.2■□□□□ 0.5
SCAMP4-210ENST00000588555 TRAV26-1A0A087WT03 109 aa18.19■□□□□ 0.5
SCAMP4-210ENST00000588555 CDPF1Q6NVV7 123 aa18.19■□□□□ 0.5
SCAMP4-210ENST00000588555 NTM-AS1Q6ZSK4 140 aa18.19■□□□□ 0.5
SCAMP4-210ENST00000588555 C11orf45Q8TAV5 145 aa18.19■□□□□ 0.5
SCAMP4-210ENST00000588555 A0A0J9YY99 117 aa18.18■□□□□ 0.5
SCAMP4-210ENST00000588555 LINC01549A6NIU2 74 aa18.18■□□□□ 0.5
SCAMP4-210ENST00000588555 ATP5LO75964 103 aa18.18■□□□□ 0.5
SCAMP4-210ENST00000588555 SCGB1D1O95968 90 aa18.18■□□□□ 0.5
SCAMP4-210ENST00000588555 SCGB3A1Q96QR1 104 aa18.18■□□□□ 0.5
SCAMP4-210ENST00000588555 PRKDCP78527 4128 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-210ENST00000588555 STAB2Q8WWQ8 2551 aa18.18■□□□□ 0.5
SCAMP4-210ENST00000588555 NANOS2P60321 138 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-210ENST00000588555 IGIPA6NJ69 53 aa18.17■□□□□ 0.5
SCAMP4-210ENST00000588555 ERASQ7Z444 233 aa18.17■□□□□ 0.5
SCAMP4-210ENST00000588555 PET117Q6UWS5 81 aa18.16■□□□□ 0.5
SCAMP4-210ENST00000588555 C12orf57Q99622 126 aa18.16■□□□□ 0.5
SCAMP4-210ENST00000588555 GTSF1LQ9H1H1 148 aa18.16■□□□□ 0.5
SCAMP4-210ENST00000588555 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.14■□□□□ 0.5
SCAMP4-210ENST00000588555 H0Y8G0 127 aa18.14■□□□□ 0.49
SCAMP4-210ENST00000588555 DEFA6Q01524 100 aa18.13■□□□□ 0.49
SCAMP4-210ENST00000588555 ATP6V0E2Q8NHE4 81 aa18.13■□□□□ 0.49
SCAMP4-210ENST00000588555 TIMM17AQ99595 171 aa18.13■□□□□ 0.49
SCAMP4-210ENST00000588555 LINC01545Q5VT33 79 aa18.12■□□□□ 0.49
SCAMP4-210ENST00000588555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.12■□□□□ 0.49
SCAMP4-210ENST00000588555 IGKV2-29A2NJV5 120 aaPredicted RBP18.12■□□□□ 0.49
SCAMP4-210ENST00000588555 TMEM141Q96I45 108 aa18.1■□□□□ 0.49
SCAMP4-210ENST00000588555 PRSS1P07477 247 aa18.09■□□□□ 0.49
SCAMP4-210ENST00000588555 PYGO1Q9Y3Y4 419 aa18.09■□□□□ 0.49
SCAMP4-210ENST00000588555 TRBV6-8A0A0A6YYG3 113 aa18.09■□□□□ 0.49
SCAMP4-210ENST00000588555 LGALS9CQ6DKI2 356 aa18.09■□□□□ 0.49
SCAMP4-210ENST00000588555 Q6ZN92 141 aa18.09■□□□□ 0.49
SCAMP4-210ENST00000588555 BAALCQ8WXS3 180 aa18.09■□□□□ 0.49
SCAMP4-210ENST00000588555 A0A096LPF7 62 aa18.08■□□□□ 0.48
SCAMP4-210ENST00000588555 H3BNG1 76 aa18.08■□□□□ 0.48
SCAMP4-210ENST00000588555 UBE2D4Q9Y2X8 147 aa18.08■□□□□ 0.48
SCAMP4-210ENST00000588555 ODF1Q14990 250 aa18.07■□□□□ 0.48
SCAMP4-210ENST00000588555 MRPL23Q16540 153 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-210ENST00000588555 TMEM97Q5BJF2 176 aa18.07■□□□□ 0.48
SCAMP4-210ENST00000588555 TEX43Q6ZNM6 134 aa18.07■□□□□ 0.48
SCAMP4-210ENST00000588555 FAM104AQ969W3 186 aa18.07■□□□□ 0.48
SCAMP4-210ENST00000588555 PMCHL2Q9BQD1 86 aa18.07■□□□□ 0.48
SCAMP4-210ENST00000588555 ICOSQ9Y6W8 199 aa18.07■□□□□ 0.48
SCAMP4-210ENST00000588555 TRBV25-1A0A075B6N4 114 aa18.07■□□□□ 0.48
SCAMP4-210ENST00000588555 DEFB131BA0A096LNP1 70 aa18.07■□□□□ 0.48
SCAMP4-210ENST00000588555 C20orf202A1L168 122 aa18.07■□□□□ 0.48
SCAMP4-210ENST00000588555 NHLRC4P0CG21 123 aaPredicted RBP18.06■□□□□ 0.48
SCAMP4-210ENST00000588555 CEMP1Q6PRD7 247 aaPredicted RBP18.06■□□□□ 0.48
SCAMP4-210ENST00000588555 OPRPNQ99935 248 aaPredicted RBP18.06■□□□□ 0.48
SCAMP4-210ENST00000588555 TMEM243Q9BU79 118 aa18.06■□□□□ 0.48
SCAMP4-210ENST00000588555 TRAV12-1A0A0B4J245 112 aa18.05■□□□□ 0.48
SCAMP4-210ENST00000588555 SPANXA1Q9NS26 97 aa18.05■□□□□ 0.48
SCAMP4-210ENST00000588555 IGLV4-3A0A075B6K6 122 aa18.04■□□□□ 0.48
SCAMP4-210ENST00000588555 ATOH7Q8N100 152 aa18.04■□□□□ 0.48
SCAMP4-210ENST00000588555 TIMM21Q9BVV7 248 aa18.04■□□□□ 0.48
SCAMP4-210ENST00000588555 A0A087WX48 190 aa18.03■□□□□ 0.48
SCAMP4-210ENST00000588555 NPSP0C0P6 89 aa18.03■□□□□ 0.48
SCAMP4-210ENST00000588555 SH2D6Q7Z4S9 175 aa18.02■□□□□ 0.48
SCAMP4-210ENST00000588555 MRPL52Q86TS9 123 aaKnown RBP18.02■□□□□ 0.48
SCAMP4-210ENST00000588555 TRAV10A0A0B4J240 114 aa18.02■□□□□ 0.47
SCAMP4-210ENST00000588555 ZC2HC1BQ5TFG8 222 aa18.02■□□□□ 0.47
SCAMP4-210ENST00000588555 PRSS29PA6NIE9 313 aa18.01■□□□□ 0.47
SCAMP4-210ENST00000588555 FGF6P10767 208 aa18.01■□□□□ 0.47
SCAMP4-210ENST00000588555 H7C423 109 aa18■□□□□ 0.47
SCAMP4-210ENST00000588555 PMVKQ15126 192 aa18■□□□□ 0.47
SCAMP4-210ENST00000588555 CST9LQ9H4G1 147 aa17.99■□□□□ 0.47
SCAMP4-210ENST00000588555 MRPL35Q9NZE8 188 aaKnown RBP17.99■□□□□ 0.47
SCAMP4-210ENST00000588555 CSDC2Q9Y534 153 aaKnown RBP17.99■□□□□ 0.47
SCAMP4-210ENST00000588555 UBE2L6O14933 153 aa17.98■□□□□ 0.47
SCAMP4-210ENST00000588555 MRPS36P82909 103 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-210ENST00000588555 Q6ZUT4 128 aa17.98■□□□□ 0.47
SCAMP4-210ENST00000588555 AMELXQ99217 191 aa17.98■□□□□ 0.47
SCAMP4-210ENST00000588555 PAPPA-AS1Q5QFB9 102 aa17.97■□□□□ 0.47
SCAMP4-210ENST00000588555 CHCHD5Q9BSY4 110 aa17.97■□□□□ 0.47
SCAMP4-210ENST00000588555 FBN3Q75N90 2809 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms