RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 C11orf52Q96A22 123 aa8.99□□□□□ -0.97
ERCC1-205ENST00000587888 XKRY2A2RUG3 117 aa8.98□□□□□ -0.97
ERCC1-205ENST00000587888 GAGE12HA6NDE8 117 aa8.98□□□□□ -0.97
ERCC1-205ENST00000587888 TRGC1P0CF51 173 aa8.98□□□□□ -0.97
ERCC1-205ENST00000587888 COTL1Q14019 142 aa8.98□□□□□ -0.97
ERCC1-205ENST00000587888 WDR73Q6P4I2 378 aa8.98□□□□□ -0.97
ERCC1-205ENST00000587888 DPH3P1Q9H4G8 78 aa8.98□□□□□ -0.97
ERCC1-205ENST00000587888 SPACA4Q8TDM5 124 aa8.97□□□□□ -0.97
ERCC1-205ENST00000587888 RNF185Q96GF1 192 aa8.97□□□□□ -0.97
ERCC1-205ENST00000587888 PGLYRP4Q96LB8 373 aa8.97□□□□□ -0.97
ERCC1-205ENST00000587888 COX6A2Q02221 97 aa8.96□□□□□ -0.98
ERCC1-205ENST00000587888 TWIST1Q15672 202 aa8.96□□□□□ -0.98
ERCC1-205ENST00000587888 HIGD2BQ4VC39 106 aa8.96□□□□□ -0.98
ERCC1-205ENST00000587888 CFAP161Q6P656 301 aa8.96□□□□□ -0.98
ERCC1-205ENST00000587888 MED9Q9NWA0 146 aa8.96□□□□□ -0.98
ERCC1-205ENST00000587888 FAT3Q8TDW7 4589 aa8.95□□□□□ -0.98
ERCC1-205ENST00000587888 TRAV1-1A0A0B4J248 108 aa8.95□□□□□ -0.98
ERCC1-205ENST00000587888 PHOX2AO14813 284 aa8.95□□□□□ -0.98
ERCC1-205ENST00000587888 MAJINQ3KP22 176 aa8.95□□□□□ -0.98
ERCC1-205ENST00000587888 C9orf62Q8N4C0 152 aa8.95□□□□□ -0.98
ERCC1-205ENST00000587888 C15orf56Q8N910 161 aa8.95□□□□□ -0.98
ERCC1-205ENST00000587888 NUDT10Q8NFP7 164 aa8.95□□□□□ -0.98
ERCC1-205ENST00000587888 C7orf33Q8WU49 177 aa8.95□□□□□ -0.98
ERCC1-205ENST00000587888 GTSF1Q8WW33 167 aa8.95□□□□□ -0.98
ERCC1-205ENST00000587888 NUDT11Q96G61 164 aa8.95□□□□□ -0.98
ERCC1-205ENST00000587888 HMCN2Q8NDA2 5059 aa8.95□□□□□ -0.98
ERCC1-205ENST00000587888 TRBV20OR9-2A0A075B6H5 130 aa8.94□□□□□ -0.98
ERCC1-205ENST00000587888 TRAV26-2A0A0B4J265 109 aa8.94□□□□□ -0.98
ERCC1-205ENST00000587888 IGKV2-24A0A0C4DH68 120 aa8.94□□□□□ -0.98
ERCC1-205ENST00000587888 TEX46H3BTG2 121 aa8.94□□□□□ -0.98
ERCC1-205ENST00000587888 RPS10P46783 165 aaKnown RBP8.94□□□□□ -0.98
ERCC1-205ENST00000587888 MEF2BQ02080 365 aaPredicted RBP8.94□□□□□ -0.98
ERCC1-205ENST00000587888 AMMECR1LQ6DCA0 310 aa8.94□□□□□ -0.98
ERCC1-205ENST00000587888 GATD1Q8NB37 220 aa8.94□□□□□ -0.98
ERCC1-205ENST00000587888 PRSS3P2Q8NHM4 247 aa8.94□□□□□ -0.98
ERCC1-205ENST00000587888 SMIM12Q96EX1 92 aa8.94□□□□□ -0.98
ERCC1-205ENST00000587888 BIN3Q9NQY0 253 aa8.94□□□□□ -0.98
ERCC1-205ENST00000587888 PLAC8Q9NZF1 115 aa8.94□□□□□ -0.98
ERCC1-205ENST00000587888 PDE6DO43924 150 aa8.93□□□□□ -0.98
ERCC1-205ENST00000587888 RNASEKQ6P5S7 137 aaKnown RBP8.93□□□□□ -0.98
ERCC1-205ENST00000587888 LYPD6BQ8NI32 183 aa8.93□□□□□ -0.98
ERCC1-205ENST00000587888 UBR4Q5T4S7 5183 aa8.92□□□□□ -0.98
ERCC1-205ENST00000587888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.92□□□□□ -0.98
ERCC1-205ENST00000587888 IGKV2-29A2NJV5 120 aaPredicted RBP8.92□□□□□ -0.98
ERCC1-205ENST00000587888 NDUFS6O75380 124 aaKnown RBP8.92□□□□□ -0.98
ERCC1-205ENST00000587888 Q6ZNX1 250 aa8.92□□□□□ -0.98
ERCC1-205ENST00000587888 CHCHD10Q8WYQ3 142 aaPredicted RBP8.92□□□□□ -0.98
ERCC1-205ENST00000587888 RPL39LQ96EH5 51 aaKnown RBP8.92□□□□□ -0.98
ERCC1-205ENST00000587888 PKHD1L1Q86WI1 4243 aa8.91□□□□□ -0.98
ERCC1-205ENST00000587888 CTRLP40313 264 aa8.91□□□□□ -0.98
ERCC1-205ENST00000587888 FOXA3P55318 350 aaPredicted RBP8.91□□□□□ -0.98
ERCC1-205ENST00000587888 EIF5AL1Q6IS14 154 aaKnown RBP8.91□□□□□ -0.98
ERCC1-205ENST00000587888 STPG4Q8N801 248 aa8.91□□□□□ -0.98
ERCC1-205ENST00000587888 RNASE7Q9H1E1 156 aaKnown RBP8.91□□□□□ -0.98
ERCC1-205ENST00000587888 RPP21Q9H633 154 aaKnown RBP8.9□□□□□ -0.98
ERCC1-205ENST00000587888 BCL2P10415 239 aa8.89□□□□□ -0.99
ERCC1-205ENST00000587888 FGF6P10767 208 aa8.89□□□□□ -0.99
ERCC1-205ENST00000587888 OCC1Q8TAD7 63 aa8.89□□□□□ -0.99
ERCC1-205ENST00000587888 A0A096LNI7 61 aa8.88□□□□□ -0.99
ERCC1-205ENST00000587888 K7EN84 100 aa8.88□□□□□ -0.99
ERCC1-205ENST00000587888 APCSP02743 223 aa8.88□□□□□ -0.99
ERCC1-205ENST00000587888 FOXI1Q12951 378 aa8.88□□□□□ -0.99
ERCC1-205ENST00000587888 ODF1Q14990 250 aa8.88□□□□□ -0.99
ERCC1-205ENST00000587888 SMIM15Q7Z3B0 74 aa8.88□□□□□ -0.99
ERCC1-205ENST00000587888 CNFNQ9BYD5 112 aa8.88□□□□□ -0.99
ERCC1-205ENST00000587888 GVQW2A0A096LPI5 108 aaPredicted RBP8.87□□□□□ -0.99
ERCC1-205ENST00000587888 SDHAF1A6NFY7 115 aa8.87□□□□□ -0.99
ERCC1-205ENST00000587888 H7C423 109 aa8.87□□□□□ -0.99
ERCC1-205ENST00000587888 NCR2O95944 276 aa8.87□□□□□ -0.99
ERCC1-205ENST00000587888 PMCHP20382 165 aa8.87□□□□□ -0.99
ERCC1-205ENST00000587888 XCL1P47992 114 aa8.87□□□□□ -0.99
ERCC1-205ENST00000587888 PRR3P79522 188 aaKnown RBP8.87□□□□□ -0.99
ERCC1-205ENST00000587888 LINC00526Q96FQ7 95 aa8.87□□□□□ -0.99
ERCC1-205ENST00000587888 LINC01600Q96MT4 127 aa8.87□□□□□ -0.99
ERCC1-205ENST00000587888 OR5A1Q8NGJ0 315 aa8.86□□□□□ -0.99
ERCC1-205ENST00000587888 TMEM101Q96IK0 257 aa8.86□□□□□ -0.99
ERCC1-205ENST00000587888 BTF3L4Q96K17 158 aa8.86□□□□□ -0.99
ERCC1-205ENST00000587888 FAM231BA6NCW3 169 aa8.85□□□□□ -0.99
ERCC1-205ENST00000587888 I3L3M4 83 aa8.85□□□□□ -0.99
ERCC1-205ENST00000587888 CCL25O15444 150 aa8.85□□□□□ -0.99
ERCC1-205ENST00000587888 TEX261Q6UWH6 196 aa8.85□□□□□ -0.99
ERCC1-205ENST00000587888 LINC00959A0A1B0GUT2 108 aa8.84□□□□□ -0.99
ERCC1-205ENST00000587888 GATCO43716 136 aaKnown RBP8.84□□□□□ -0.99
ERCC1-205ENST00000587888 IGHV1-58A0A0C4DH39 117 aa8.83□□□□□ -1
ERCC1-205ENST00000587888 GAS8-AS1O95177 125 aa8.83□□□□□ -1
ERCC1-205ENST00000587888 ZNF25P17030 456 aaPredicted RBP8.83□□□□□ -1
ERCC1-205ENST00000587888 LINC00474Q9P2X8 69 aa8.83□□□□□ -1
ERCC1-205ENST00000587888 TAGLN2P37802 199 aaKnown RBP8.82□□□□□ -1
ERCC1-205ENST00000587888 SS18Q15532 418 aa8.82□□□□□ -1
ERCC1-205ENST00000587888 SPINK6Q6UWN8 80 aa8.82□□□□□ -1
ERCC1-205ENST00000587888 CARD19Q96LW7 228 aa8.82□□□□□ -1
ERCC1-205ENST00000587888 ST20Q9HBF5 79 aa8.82□□□□□ -1
ERCC1-205ENST00000587888 A0A0J9YXV3 536 aa8.81□□□□□ -1
ERCC1-205ENST00000587888 TRBV6-5A0A0K0K1A5 114 aa8.81□□□□□ -1
ERCC1-205ENST00000587888 A8MWL6 223 aa8.81□□□□□ -1
ERCC1-205ENST00000587888 ZNF561-AS1K7EIQ3 104 aa8.81□□□□□ -1
ERCC1-205ENST00000587888 TSHBP01222 138 aa8.81□□□□□ -1
ERCC1-205ENST00000587888 ESDP10768 282 aa8.81□□□□□ -1
ERCC1-205ENST00000587888 SLC51BQ86UW2 128 aa8.81□□□□□ -1
ERCC1-205ENST00000587888 TMEM242Q9NWH2 141 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms