RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 IGHV4-28A0A0C4DH34 117 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 SMIM9A6NGZ8 99 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 HSBP1L1C9JCN9 74 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 SYS1-DBNDD2H3BUS1 97 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 HTN1P15515 57 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 FAM74A4Q5TZK3 123 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 SUMO4Q6EEV6 95 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 ZFP2Q6ZN57 461 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 Q6ZTC4 211 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 C11orf72Q8NBR9 251 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 RNASE8Q8TDE3 154 aaKnown RBP5.57□□□□□ -1.52
VMP1-204ENST00000587259 RASL10AQ92737 203 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 C11orf68Q9H3H3 251 aaKnown RBP5.57□□□□□ -1.52
VMP1-204ENST00000587259 CELA1Q9UNI1 258 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 DNAH2Q9P225 4427 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 FAT2Q9NYQ8 4349 aa5.57□□□□□ -1.52
VMP1-204ENST00000587259 IGLV2-18A0A075B6J9 118 aa5.56□□□□□ -1.52
VMP1-204ENST00000587259 TRAV26-2A0A0B4J265 109 aa5.56□□□□□ -1.52
VMP1-204ENST00000587259 VCYO14598 125 aa5.56□□□□□ -1.52
VMP1-204ENST00000587259 RTL8CO15255 209 aa5.56□□□□□ -1.52
VMP1-204ENST00000587259 GIG44P09565 113 aaPredicted RBP5.56□□□□□ -1.52
VMP1-204ENST00000587259 DAZ2Q13117 558 aaKnown RBP5.56□□□□□ -1.52
VMP1-204ENST00000587259 RRN3P1Q2M238 152 aa5.56□□□□□ -1.52
VMP1-204ENST00000587259 Q8NAQ8 132 aa5.56□□□□□ -1.52
VMP1-204ENST00000587259 IFI27L1Q96BM0 104 aa5.56□□□□□ -1.52
VMP1-204ENST00000587259 DNAJC30Q96LL9 226 aa5.56□□□□□ -1.52
VMP1-204ENST00000587259 DNAH6Q9C0G6 4158 aa5.55□□□□□ -1.52
VMP1-204ENST00000587259 A0A087WWL8 130 aa5.55□□□□□ -1.52
VMP1-204ENST00000587259 TRBV27A0A0K0K1C4 114 aa5.55□□□□□ -1.52
VMP1-204ENST00000587259 PRSS29PA6NIE9 313 aa5.55□□□□□ -1.52
VMP1-204ENST00000587259 NUDT3O95989 172 aa5.55□□□□□ -1.52
VMP1-204ENST00000587259 CRYGDP07320 174 aa5.55□□□□□ -1.52
VMP1-204ENST00000587259 LINC00315P59091 139 aa5.55□□□□□ -1.52
VMP1-204ENST00000587259 RHOHQ15669 191 aa5.55□□□□□ -1.52
VMP1-204ENST00000587259 ZNF705AQ6ZN79 300 aaPredicted RBP5.55□□□□□ -1.52
VMP1-204ENST00000587259 C1orf158Q8N1D5 194 aa5.55□□□□□ -1.52
VMP1-204ENST00000587259 IGHV3OR16-12A0A075B7B8 117 aa5.54□□□□□ -1.52
VMP1-204ENST00000587259 A0A096LNJ9 63 aa5.54□□□□□ -1.52
VMP1-204ENST00000587259 TRAV4A0A0B4J268 109 aa5.54□□□□□ -1.52
VMP1-204ENST00000587259 TRBV10-1A0A0K0K1A3 114 aa5.54□□□□□ -1.52
VMP1-204ENST00000587259 PCP4L1A6NKN8 68 aa5.54□□□□□ -1.52
VMP1-204ENST00000587259 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.54□□□□□ -1.52
VMP1-204ENST00000587259 M0QY20 66 aa5.54□□□□□ -1.52
VMP1-204ENST00000587259 RS1O15537 224 aa5.54□□□□□ -1.52
VMP1-204ENST00000587259 AZU1P20160 251 aa5.54□□□□□ -1.52
VMP1-204ENST00000587259 LINC01545Q5VT33 79 aa5.54□□□□□ -1.52
VMP1-204ENST00000587259 CYSLTR1Q9Y271 337 aa5.54□□□□□ -1.52
VMP1-204ENST00000587259 TRAV9-2A0A087WT02 112 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 SDHAF1A6NFY7 115 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 I3L3M4 83 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 IGHV3-53P01767 116 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 NPSP0C0P6 89 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 GATA1P15976 413 aaPredicted RBP5.53□□□□□ -1.52
VMP1-204ENST00000587259 POLR2KP53803 58 aaKnown RBP5.53□□□□□ -1.52
VMP1-204ENST00000587259 SMAGPQ0VAQ4 97 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 PAPPA-AS1Q5QFB9 102 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 CFAP126Q5VTH2 177 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 Q6ZN92 141 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 LINC00336Q6ZUF6 198 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 Q8N976 141 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 CSNK1G2-AS1Q8NCQ2 148 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 OR4C5Q8NGB2 326 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 TOMM6Q96B49 74 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 RPL39LQ96EH5 51 aaKnown RBP5.53□□□□□ -1.52
VMP1-204ENST00000587259 TNFRSF18Q9Y5U5 241 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 X6R8D5 127 aa5.53□□□□□ -1.52
VMP1-204ENST00000587259 DNAH17Q9UFH2 4485 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 TRGV1A0A0A0MS02 117 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 TRAV10A0A0B4J240 114 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 TRAV12-1A0A0B4J245 112 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 GAS8-AS1O95177 125 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 DDTP30046 118 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 C12orf74Q32Q52 190 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 SPATA45Q537H7 98 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 UFSP1Q6NVU6 142 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 MRPL52Q86TS9 123 aaKnown RBP5.52□□□□□ -1.53
VMP1-204ENST00000587259 ZNF664Q8N3J9 261 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 TMEM141Q96I45 108 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 C18orf15Q96N68 181 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 JPT2Q9H910 190 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 PAM16Q9Y3D7 125 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.52□□□□□ -1.53
VMP1-204ENST00000587259 DYNC1H1Q14204 4646 aaKnown RBP5.52□□□□□ -1.53
VMP1-204ENST00000587259 PKD1P98161 4303 aa5.52□□□□□ -1.53
VMP1-204ENST00000587259 DEFB131BA0A096LNP1 70 aa5.51□□□□□ -1.53
VMP1-204ENST00000587259 TEX48A0A1B0GUV7 120 aa5.51□□□□□ -1.53
VMP1-204ENST00000587259 PRSS1P07477 247 aa5.51□□□□□ -1.53
VMP1-204ENST00000587259 PLNP26678 52 aa5.51□□□□□ -1.53
VMP1-204ENST00000587259 RPL36AP83881 106 aaKnown RBP5.51□□□□□ -1.53
VMP1-204ENST00000587259 C2orf66Q6UXQ4 117 aa5.51□□□□□ -1.53
VMP1-204ENST00000587259 ERASQ7Z444 233 aa5.51□□□□□ -1.53
VMP1-204ENST00000587259 RPL36ALQ969Q0 106 aaKnown RBP5.51□□□□□ -1.53
VMP1-204ENST00000587259 SCGB3A1Q96QR1 104 aa5.51□□□□□ -1.53
VMP1-204ENST00000587259 TIMM17AQ99595 171 aa5.51□□□□□ -1.53
VMP1-204ENST00000587259 MRPL16Q9NX20 251 aaKnown RBP5.51□□□□□ -1.53
VMP1-204ENST00000587259 UQCR10Q9UDW1 63 aa5.51□□□□□ -1.53
VMP1-204ENST00000587259 DNAH11Q96DT5 4516 aa5.51□□□□□ -1.53
VMP1-204ENST00000587259 TRGV2A0A075B6R0 118 aa5.5□□□□□ -1.53
VMP1-204ENST00000587259 LYRM9A8MSI8 78 aa5.5□□□□□ -1.53
VMP1-204ENST00000587259 H0Y8G0 127 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms