RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 TRAV8-4A0A0B4J246 113 aa13.37□□□□□ -0.27
VAT1-203ENST00000587062 EPM2AB3EWF7 344 aa13.37□□□□□ -0.27
VAT1-203ENST00000587062 XGP55808 180 aa13.37□□□□□ -0.27
VAT1-203ENST00000587062 RAB14P61106 215 aa13.37□□□□□ -0.27
VAT1-203ENST00000587062 RPL23P62829 140 aaKnown RBP13.37□□□□□ -0.27
VAT1-203ENST00000587062 REG3AQ06141 175 aa13.37□□□□□ -0.27
VAT1-203ENST00000587062 WFDC2Q14508 124 aa13.37□□□□□ -0.27
VAT1-203ENST00000587062 NAT8BQ9UHF3 227 aa13.37□□□□□ -0.27
VAT1-203ENST00000587062 HLA-DQA1P01909 254 aa13.36□□□□□ -0.27
VAT1-203ENST00000587062 PMCHP20382 165 aa13.36□□□□□ -0.27
VAT1-203ENST00000587062 V9GYV3 84 aa13.36□□□□□ -0.27
VAT1-203ENST00000587062 SDHAF1A6NFY7 115 aa13.35□□□□□ -0.27
VAT1-203ENST00000587062 H7C423 109 aa13.35□□□□□ -0.27
VAT1-203ENST00000587062 PPP1R17O96001 155 aa13.35□□□□□ -0.27
VAT1-203ENST00000587062 AMMECR1LQ6DCA0 310 aa13.35□□□□□ -0.27
VAT1-203ENST00000587062 RPL39LQ96EH5 51 aaKnown RBP13.35□□□□□ -0.27
VAT1-203ENST00000587062 MRAP2Q96G30 205 aa13.35□□□□□ -0.27
VAT1-203ENST00000587062 ST20Q9HBF5 79 aa13.35□□□□□ -0.27
VAT1-203ENST00000587062 I3L3M4 83 aa13.34□□□□□ -0.27
VAT1-203ENST00000587062 APCSP02743 223 aa13.34□□□□□ -0.27
VAT1-203ENST00000587062 CLPSL2Q6UWE3 100 aa13.34□□□□□ -0.27
VAT1-203ENST00000587062 TRBV6-5A0A0K0K1A5 114 aa13.33□□□□□ -0.28
VAT1-203ENST00000587062 NUP35Q8NFH5 326 aa13.33□□□□□ -0.28
VAT1-203ENST00000587062 KRTAP17-1Q9BYP8 105 aa13.33□□□□□ -0.28
VAT1-203ENST00000587062 LRP1BQ9NZR2 4599 aa13.32□□□□□ -0.28
VAT1-203ENST00000587062 RYR1P21817 5038 aa13.32□□□□□ -0.28
VAT1-203ENST00000587062 A0A1B0GW15 77 aa13.32□□□□□ -0.28
VAT1-203ENST00000587062 FAM229AH3BQW9 127 aa13.32□□□□□ -0.28
VAT1-203ENST00000587062 C20orf203Q8NBC4 194 aa13.32□□□□□ -0.28
VAT1-203ENST00000587062 DEFB104AQ8WTQ1 72 aa13.32□□□□□ -0.28
VAT1-203ENST00000587062 BTF3L4Q96K17 158 aa13.32□□□□□ -0.28
VAT1-203ENST00000587062 RAB4AP20338 218 aa13.31□□□□□ -0.28
VAT1-203ENST00000587062 C9JQL5 133 aa13.3□□□□□ -0.28
VAT1-203ENST00000587062 USP17L23D6RBM5 183 aa13.3□□□□□ -0.28
VAT1-203ENST00000587062 S100A8P05109 93 aa13.3□□□□□ -0.28
VAT1-203ENST00000587062 SRSF3P84103 164 aaKnown RBP13.3□□□□□ -0.28
VAT1-203ENST00000587062 RNASEKQ6P5S7 137 aaKnown RBP13.3□□□□□ -0.28
VAT1-203ENST00000587062 CLRN3Q8NCR9 226 aa13.3□□□□□ -0.28
VAT1-203ENST00000587062 TMEM101Q96IK0 257 aa13.3□□□□□ -0.28
VAT1-203ENST00000587062 KRTAP4-5Q9BYR2 181 aa13.3□□□□□ -0.28
VAT1-203ENST00000587062 IGLV4-60A0A075B6I1 120 aa13.29□□□□□ -0.28
VAT1-203ENST00000587062 DGAT2L7PQ6IED9 249 aa13.29□□□□□ -0.28
VAT1-203ENST00000587062 IGLV10-54A0A075B6I4 117 aa13.28□□□□□ -0.28
VAT1-203ENST00000587062 SMIM27A0A1W2PRY6 76 aa13.28□□□□□ -0.28
VAT1-203ENST00000587062 ZNF25P17030 456 aaPredicted RBP13.28□□□□□ -0.28
VAT1-203ENST00000587062 SMAGPQ0VAQ4 97 aa13.28□□□□□ -0.28
VAT1-203ENST00000587062 AMN1Q8IY45 258 aa13.28□□□□□ -0.28
VAT1-203ENST00000587062 RNF185Q96GF1 192 aa13.27□□□□□ -0.29
VAT1-203ENST00000587062 LINC00862A6NCI5 91 aa13.26□□□□□ -0.29
VAT1-203ENST00000587062 F8W036 122 aa13.26□□□□□ -0.29
VAT1-203ENST00000587062 VCYO14598 125 aa13.26□□□□□ -0.29
VAT1-203ENST00000587062 PPP1R2P9O14990 202 aa13.26□□□□□ -0.29
VAT1-203ENST00000587062 Q5VSD8 79 aa13.26□□□□□ -0.29
VAT1-203ENST00000587062 DNAH5Q8TE73 4624 aa13.26□□□□□ -0.29
VAT1-203ENST00000587062 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.25□□□□□ -0.29
VAT1-203ENST00000587062 IGKV2-29A2NJV5 120 aaPredicted RBP13.25□□□□□ -0.29
VAT1-203ENST00000587062 SMR3BP02814 79 aaPredicted RBP13.25□□□□□ -0.29
VAT1-203ENST00000587062 FGF6P10767 208 aa13.25□□□□□ -0.29
VAT1-203ENST00000587062 FCER1GP30273 86 aa13.25□□□□□ -0.29
VAT1-203ENST00000587062 CAMPP49913 170 aa13.25□□□□□ -0.29
VAT1-203ENST00000587062 CFAP161Q6P656 301 aa13.25□□□□□ -0.29
VAT1-203ENST00000587062 KIR2DL4Q99706 377 aa13.25□□□□□ -0.29
VAT1-203ENST00000587062 AP5S1Q9NUS5 200 aa13.25□□□□□ -0.29
VAT1-203ENST00000587062 TRBV27A0A0K0K1C4 114 aa13.24□□□□□ -0.29
VAT1-203ENST00000587062 POLR2KP53803 58 aaKnown RBP13.24□□□□□ -0.29
VAT1-203ENST00000587062 FAM30AQ9NZY2 134 aa13.24□□□□□ -0.29
VAT1-203ENST00000587062 IGKV3OR2-268A0A0C4DH90 116 aa13.23□□□□□ -0.29
VAT1-203ENST00000587062 PNRC1Q12796 327 aaPredicted RBP13.23□□□□□ -0.29
VAT1-203ENST00000587062 FAM104BQ5XKR9 115 aa13.23□□□□□ -0.29
VAT1-203ENST00000587062 KRTAP26-1Q6PEX3 210 aa13.23□□□□□ -0.29
VAT1-203ENST00000587062 Q6ZSA8 131 aa13.23□□□□□ -0.29
VAT1-203ENST00000587062 OR5A1Q8NGJ0 315 aa13.23□□□□□ -0.29
VAT1-203ENST00000587062 TMEM242Q9NWH2 141 aa13.23□□□□□ -0.29
VAT1-203ENST00000587062 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.22□□□□□ -0.29
VAT1-203ENST00000587062 TCAPO15273 167 aa13.22□□□□□ -0.29
VAT1-203ENST00000587062 PRSS1P07477 247 aa13.22□□□□□ -0.29
VAT1-203ENST00000587062 CKS2P33552 79 aa13.22□□□□□ -0.29
VAT1-203ENST00000587062 SUMO2P61956 95 aaKnown RBP13.22□□□□□ -0.29
VAT1-203ENST00000587062 HBBP68871 147 aa13.22□□□□□ -0.29
VAT1-203ENST00000587062 HSPG2P98160 4391 aa13.22□□□□□ -0.29
VAT1-203ENST00000587062 hDV102S1A0JD36 115 aa13.21□□□□□ -0.29
VAT1-203ENST00000587062 C7orf77A4D0Y5 90 aa13.21□□□□□ -0.29
VAT1-203ENST00000587062 TSHBP01222 138 aa13.21□□□□□ -0.29
VAT1-203ENST00000587062 HAMPP81172 84 aa13.21□□□□□ -0.29
VAT1-203ENST00000587062 LINC01620Q4KN68 170 aa13.21□□□□□ -0.29
VAT1-203ENST00000587062 TMEM18Q96B42 140 aa13.21□□□□□ -0.29
VAT1-203ENST00000587062 GAS8-AS1O95177 125 aa13.2□□□□□ -0.3
VAT1-203ENST00000587062 INAFM2P0DMQ5 153 aa13.2□□□□□ -0.3
VAT1-203ENST00000587062 ESDP10768 282 aa13.2□□□□□ -0.3
VAT1-203ENST00000587062 RPS10P46783 165 aaKnown RBP13.2□□□□□ -0.3
VAT1-203ENST00000587062 C20orf78Q9BR46 151 aa13.2□□□□□ -0.3
VAT1-203ENST00000587062 GAGE12HA6NDE8 117 aa13.19□□□□□ -0.3
VAT1-203ENST00000587062 SMKR1H3BMG3 65 aa13.19□□□□□ -0.3
VAT1-203ENST00000587062 MT-ND4LP03901 98 aa13.19□□□□□ -0.3
VAT1-203ENST00000587062 PLA2G1BP04054 148 aaKnown RBP13.19□□□□□ -0.3
VAT1-203ENST00000587062 MRPL51Q4U2R6 128 aaKnown RBP13.19□□□□□ -0.3
VAT1-203ENST00000587062 ANAPC16Q96DE5 110 aa13.19□□□□□ -0.3
VAT1-203ENST00000587062 PPBPP02775 128 aa13.18□□□□□ -0.3
VAT1-203ENST00000587062 SS18Q15532 418 aa13.18□□□□□ -0.3
VAT1-203ENST00000587062 MRPL54Q6P161 138 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms