RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 CHTF8P0CG12 524 aa12.31□□□□□ -0.44
TRAF4-216ENST00000586813 SPACA4Q8TDM5 124 aa12.31□□□□□ -0.44
TRAF4-216ENST00000586813 DPH3P1Q9H4G8 78 aa12.31□□□□□ -0.44
TRAF4-216ENST00000586813 UBE2L6O14933 153 aa12.3□□□□□ -0.44
TRAF4-216ENST00000586813 WDR73Q6P4I2 378 aa12.3□□□□□ -0.44
TRAF4-216ENST00000586813 LYZL1Q6UWQ5 148 aa12.3□□□□□ -0.44
TRAF4-216ENST00000586813 RNF185Q96GF1 192 aa12.3□□□□□ -0.44
TRAF4-216ENST00000586813 A0A087WYN8 130 aa12.29□□□□□ -0.44
TRAF4-216ENST00000586813 IFNA1P01562 189 aa12.29□□□□□ -0.44
TRAF4-216ENST00000586813 NTF3P20783 257 aa12.29□□□□□ -0.44
TRAF4-216ENST00000586813 AMTP48728 403 aa12.29□□□□□ -0.44
TRAF4-216ENST00000586813 MEF2BQ02080 365 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-216ENST00000586813 COTL1Q14019 142 aa12.29□□□□□ -0.44
TRAF4-216ENST00000586813 TRBV20OR9-2A0A075B6H5 130 aa12.28□□□□□ -0.44
TRAF4-216ENST00000586813 SULT1A2P50226 295 aa12.28□□□□□ -0.44
TRAF4-216ENST00000586813 DPH3Q96FX2 82 aa12.28□□□□□ -0.44
TRAF4-216ENST00000586813 TEX46H3BTG2 121 aa12.27□□□□□ -0.45
TRAF4-216ENST00000586813 PDE6DO43924 150 aa12.27□□□□□ -0.45
TRAF4-216ENST00000586813 CTRLP40313 264 aa12.27□□□□□ -0.45
TRAF4-216ENST00000586813 C9orf62Q8N4C0 152 aa12.27□□□□□ -0.45
TRAF4-216ENST00000586813 C15orf56Q8N910 161 aa12.27□□□□□ -0.45
TRAF4-216ENST00000586813 BIN3Q9NQY0 253 aa12.27□□□□□ -0.45
TRAF4-216ENST00000586813 PLAC8Q9NZF1 115 aa12.26□□□□□ -0.45
TRAF4-216ENST00000586813 GAGE12HA6NDE8 117 aa12.25□□□□□ -0.45
TRAF4-216ENST00000586813 CNFNQ9BYD5 112 aa12.25□□□□□ -0.45
TRAF4-216ENST00000586813 MED9Q9NWA0 146 aa12.25□□□□□ -0.45
TRAF4-216ENST00000586813 TWIST1Q15672 202 aa12.24□□□□□ -0.45
TRAF4-216ENST00000586813 EIF5AL1Q6IS14 154 aaKnown RBP12.24□□□□□ -0.45
TRAF4-216ENST00000586813 CFAP161Q6P656 301 aa12.24□□□□□ -0.45
TRAF4-216ENST00000586813 Q6ZNX1 250 aa12.24□□□□□ -0.45
TRAF4-216ENST00000586813 hCG_2014768A0A024R1R8 64 aa12.23□□□□□ -0.45
TRAF4-216ENST00000586813 IGKV3OR2-268A0A0C4DH90 116 aa12.23□□□□□ -0.45
TRAF4-216ENST00000586813 PHOX2AO14813 284 aa12.23□□□□□ -0.45
TRAF4-216ENST00000586813 BCL2P10415 239 aa12.23□□□□□ -0.45
TRAF4-216ENST00000586813 GATD1Q8NB37 220 aa12.23□□□□□ -0.45
TRAF4-216ENST00000586813 NUDT10Q8NFP7 164 aa12.23□□□□□ -0.45
TRAF4-216ENST00000586813 NUDT11Q96G61 164 aa12.23□□□□□ -0.45
TRAF4-216ENST00000586813 TNXBP22105 4242 aa12.22□□□□□ -0.45
TRAF4-216ENST00000586813 TRAV26-2A0A0B4J265 109 aa12.22□□□□□ -0.45
TRAF4-216ENST00000586813 COX6A2Q02221 97 aa12.22□□□□□ -0.45
TRAF4-216ENST00000586813 HIGD2BQ4VC39 106 aa12.22□□□□□ -0.45
TRAF4-216ENST00000586813 C7orf33Q8WU49 177 aa12.22□□□□□ -0.45
TRAF4-216ENST00000586813 RPS10P46783 165 aaKnown RBP12.21□□□□□ -0.45
TRAF4-216ENST00000586813 TCTE3Q8IZS6 198 aa12.21□□□□□ -0.45
TRAF4-216ENST00000586813 RPP21Q9H633 154 aaKnown RBP12.21□□□□□ -0.45
TRAF4-216ENST00000586813 NDUFS6O75380 124 aaKnown RBP12.2□□□□□ -0.46
TRAF4-216ENST00000586813 AMMECR1LQ6DCA0 310 aa12.2□□□□□ -0.46
TRAF4-216ENST00000586813 AKAP14Q86UN6 197 aa12.2□□□□□ -0.46
TRAF4-216ENST00000586813 CHCHD10Q8WYQ3 142 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-216ENST00000586813 RPL39LQ96EH5 51 aaKnown RBP12.2□□□□□ -0.46
TRAF4-216ENST00000586813 RNASE7Q9H1E1 156 aaKnown RBP12.2□□□□□ -0.46
TRAF4-216ENST00000586813 GVQW2A0A096LPI5 108 aaPredicted RBP12.19□□□□□ -0.46
TRAF4-216ENST00000586813 IGKV2-24A0A0C4DH68 120 aa12.19□□□□□ -0.46
TRAF4-216ENST00000586813 NCR2O95944 276 aa12.19□□□□□ -0.46
TRAF4-216ENST00000586813 PRSS3P2Q8NHM4 247 aa12.19□□□□□ -0.46
TRAF4-216ENST00000586813 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.18□□□□□ -0.46
TRAF4-216ENST00000586813 IGKV2-29A2NJV5 120 aaPredicted RBP12.18□□□□□ -0.46
TRAF4-216ENST00000586813 H7C423 109 aa12.18□□□□□ -0.46
TRAF4-216ENST00000586813 K7EN84 100 aa12.18□□□□□ -0.46
TRAF4-216ENST00000586813 MAJINQ3KP22 176 aa12.18□□□□□ -0.46
TRAF4-216ENST00000586813 RNASEKQ6P5S7 137 aaKnown RBP12.18□□□□□ -0.46
TRAF4-216ENST00000586813 APCSP02743 223 aa12.17□□□□□ -0.46
TRAF4-216ENST00000586813 FGF6P10767 208 aa12.16□□□□□ -0.46
TRAF4-216ENST00000586813 TAGLN2P37802 199 aaKnown RBP12.16□□□□□ -0.46
TRAF4-216ENST00000586813 PRR3P79522 188 aaKnown RBP12.16□□□□□ -0.46
TRAF4-216ENST00000586813 FOXI1Q12951 378 aa12.16□□□□□ -0.46
TRAF4-216ENST00000586813 GTSF1Q8WW33 167 aa12.16□□□□□ -0.46
TRAF4-216ENST00000586813 SDHAF1A6NFY7 115 aa12.15□□□□□ -0.46
TRAF4-216ENST00000586813 FOXA3P55318 350 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-216ENST00000586813 SMIM15Q7Z3B0 74 aa12.15□□□□□ -0.46
TRAF4-216ENST00000586813 STPG4Q8N801 248 aa12.15□□□□□ -0.46
TRAF4-216ENST00000586813 OCC1Q8TAD7 63 aa12.15□□□□□ -0.46
TRAF4-216ENST00000586813 A0A096LNI7 61 aa12.14□□□□□ -0.47
TRAF4-216ENST00000586813 TEX261Q6UWH6 196 aa12.14□□□□□ -0.47
TRAF4-216ENST00000586813 ZNF25P17030 456 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-216ENST00000586813 OR5A1Q8NGJ0 315 aa12.13□□□□□ -0.47
TRAF4-216ENST00000586813 XCL1P47992 114 aa12.12□□□□□ -0.47
TRAF4-216ENST00000586813 SLC51BQ86UW2 128 aa12.12□□□□□ -0.47
TRAF4-216ENST00000586813 LYPD6BQ8NI32 183 aa12.12□□□□□ -0.47
TRAF4-216ENST00000586813 LINC01600Q96MT4 127 aa12.12□□□□□ -0.47
TRAF4-216ENST00000586813 LRP2P98164 4655 aa12.11□□□□□ -0.47
TRAF4-216ENST00000586813 I3L3M4 83 aa12.11□□□□□ -0.47
TRAF4-216ENST00000586813 TRBV6-5A0A0K0K1A5 114 aa12.1□□□□□ -0.47
TRAF4-216ENST00000586813 FAM231BA6NCW3 169 aa12.1□□□□□ -0.47
TRAF4-216ENST00000586813 PMCHP20382 165 aa12.1□□□□□ -0.47
TRAF4-216ENST00000586813 TMEM101Q96IK0 257 aa12.1□□□□□ -0.47
TRAF4-216ENST00000586813 BTF3L4Q96K17 158 aa12.1□□□□□ -0.47
TRAF4-216ENST00000586813 LINC00474Q9P2X8 69 aa12.1□□□□□ -0.47
TRAF4-216ENST00000586813 IGHV1-58A0A0C4DH39 117 aa12.09□□□□□ -0.47
TRAF4-216ENST00000586813 LINC00959A0A1B0GUT2 108 aa12.09□□□□□ -0.47
TRAF4-216ENST00000586813 CCL25O15444 150 aa12.09□□□□□ -0.47
TRAF4-216ENST00000586813 GATCO43716 136 aaKnown RBP12.09□□□□□ -0.47
TRAF4-216ENST00000586813 PKIGQ9Y2B9 76 aa12.09□□□□□ -0.47
TRAF4-216ENST00000586813 TSHBP01222 138 aa12.08□□□□□ -0.48
TRAF4-216ENST00000586813 ESDP10768 282 aa12.08□□□□□ -0.48
TRAF4-216ENST00000586813 LINC00526Q96FQ7 95 aa12.08□□□□□ -0.48
TRAF4-216ENST00000586813 CARD19Q96LW7 228 aa12.08□□□□□ -0.48
TRAF4-216ENST00000586813 A8MWL6 223 aa12.07□□□□□ -0.48
TRAF4-216ENST00000586813 GAS8-AS1O95177 125 aa12.07□□□□□ -0.48
TRAF4-216ENST00000586813 FAM231DQ6ZW35 169 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms