RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 MEIG1Q5JSS6 88 aa9.14□□□□□ -0.95
SMARCA4-208ENST00000585799 MAPKAPK5-AS1Q8N8E1 139 aa9.14□□□□□ -0.95
SMARCA4-208ENST00000585799 ZNF479Q96JC4 524 aa9.14□□□□□ -0.95
SMARCA4-208ENST00000585799 MYMXA0A1B0GTQ4 84 aa9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 CMC4P56277 68 aaPredicted RBP9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 UBE2V1Q13404 147 aa9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 SAMD5Q5TGI4 173 aa9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 LINC00482Q8N8I6 264 aa9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 TMEM141Q96I45 108 aa9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 C9orf85Q96MD7 179 aa9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 MXRA5Q9NR99 2828 aa9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 HILS1P60008 231 aa9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 AMTNQ6UX39 209 aa9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 UBR5O95071 2799 aaPredicted RBP9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 CR1P17927 2039 aa9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 TMEM101Q96IK0 257 aa9.13□□□□□ -0.95
SMARCA4-208ENST00000585799 IGLV2-18A0A075B6J9 118 aa9.12□□□□□ -0.95
SMARCA4-208ENST00000585799 PRSS47A8MTI9 375 aa9.12□□□□□ -0.95
SMARCA4-208ENST00000585799 GAGE6Q13070 117 aa9.12□□□□□ -0.95
SMARCA4-208ENST00000585799 CST9LQ9H4G1 147 aa9.12□□□□□ -0.95
SMARCA4-208ENST00000585799 TRAV25A0A0B4J276 109 aa9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 TAX1BP3O14907 124 aa9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 SPINK8P0C7L1 97 aa9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 C2orf91Q6ZV80 131 aa9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 ZNF575Q86XF7 245 aa9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 KMT2BQ9UMN6 2715 aaPredicted RBP9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 CCL25O15444 150 aa9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 POLR2KP53803 58 aaKnown RBP9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 C20orf203Q8NBC4 194 aa9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 OR5A1Q8NGJ0 315 aa9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 TIMM21Q9BVV7 248 aa9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 C11orf68Q9H3H3 251 aaKnown RBP9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 CRLF1O75462 422 aa9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 Q9UF83 564 aa9.11□□□□□ -0.95
SMARCA4-208ENST00000585799 RHOHQ15669 191 aa9.1□□□□□ -0.95
SMARCA4-208ENST00000585799 MAST4O15021 2626 aa9.1□□□□□ -0.95
SMARCA4-208ENST00000585799 A0A0J9YY99 117 aa9.1□□□□□ -0.95
SMARCA4-208ENST00000585799 LINC01549A6NIU2 74 aa9.1□□□□□ -0.95
SMARCA4-208ENST00000585799 J3QQQ9 107 aa9.1□□□□□ -0.95
SMARCA4-208ENST00000585799 CFAP126Q5VTH2 177 aa9.1□□□□□ -0.95
SMARCA4-208ENST00000585799 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
SMARCA4-208ENST00000585799 FAM19A4Q96LR4 140 aa9.1□□□□□ -0.95
SMARCA4-208ENST00000585799 DEFB135Q30KP9 77 aa9.1□□□□□ -0.95
SMARCA4-208ENST00000585799 TRAV8-3A0A0A6YYJ7 113 aa9.09□□□□□ -0.95
SMARCA4-208ENST00000585799 FGF6P10767 208 aa9.09□□□□□ -0.95
SMARCA4-208ENST00000585799 Q8N2B8 174 aa9.09□□□□□ -0.95
SMARCA4-208ENST00000585799 PGPEP1Q9NXJ5 209 aa9.09□□□□□ -0.95
SMARCA4-208ENST00000585799 HHLA3Q9XRX5 114 aa9.09□□□□□ -0.95
SMARCA4-208ENST00000585799 CLPSL2Q6UWE3 100 aa9.08□□□□□ -0.96
SMARCA4-208ENST00000585799 CEND1Q8N111 149 aa9.08□□□□□ -0.96
SMARCA4-208ENST00000585799 TENM4Q6N022 2769 aa9.08□□□□□ -0.96
SMARCA4-208ENST00000585799 NBEAL2Q6ZNJ1 2754 aa9.08□□□□□ -0.96
SMARCA4-208ENST00000585799 TRAV12-1A0A0B4J245 112 aa9.08□□□□□ -0.96
SMARCA4-208ENST00000585799 H3BRM9 83 aa9.08□□□□□ -0.96
SMARCA4-208ENST00000585799 Q6ZSN1 163 aa9.08□□□□□ -0.96
SMARCA4-208ENST00000585799 C3orf56Q8N813 242 aa9.08□□□□□ -0.96
SMARCA4-208ENST00000585799 KIF25-AS1Q9Y6Z4 181 aa9.08□□□□□ -0.96
SMARCA4-208ENST00000585799 RNF152Q8N8N0 203 aa9.08□□□□□ -0.96
SMARCA4-208ENST00000585799 LINC00315P59091 139 aa9.07□□□□□ -0.96
SMARCA4-208ENST00000585799 C21orf62-AS1Q17RA5 79 aa9.07□□□□□ -0.96
SMARCA4-208ENST00000585799 Q6ZUT4 128 aa9.07□□□□□ -0.96
SMARCA4-208ENST00000585799 C1orf158Q8N1D5 194 aa9.07□□□□□ -0.96
SMARCA4-208ENST00000585799 PLEKHB2Q96CS7 222 aa9.07□□□□□ -0.96
SMARCA4-208ENST00000585799 TRBV27A0A0K0K1C4 114 aa9.07□□□□□ -0.96
SMARCA4-208ENST00000585799 C9orf118A6NHY6 69 aa9.07□□□□□ -0.96
SMARCA4-208ENST00000585799 TSHBP01222 138 aa9.07□□□□□ -0.96
SMARCA4-208ENST00000585799 LINC00467Q9BRT7 94 aa9.07□□□□□ -0.96
SMARCA4-208ENST00000585799 TIMM17AQ99595 171 aa9.06□□□□□ -0.96
SMARCA4-208ENST00000585799 TMEM263Q8WUH6 116 aaKnown RBP9.06□□□□□ -0.96
SMARCA4-208ENST00000585799 CSMD2Q7Z408 3487 aa9.06□□□□□ -0.96
SMARCA4-208ENST00000585799 LOC100131303A0A0U1RQF7 123 aa9.06□□□□□ -0.96
SMARCA4-208ENST00000585799 F5H768 121 aa9.06□□□□□ -0.96
SMARCA4-208ENST00000585799 SIVA1O15304 175 aa9.06□□□□□ -0.96
SMARCA4-208ENST00000585799 TRBV7-3A0A075B6L6 115 aa9.05□□□□□ -0.96
SMARCA4-208ENST00000585799 K7EQD1 137 aa9.05□□□□□ -0.96
SMARCA4-208ENST00000585799 TMEM243Q9BU79 118 aa9.05□□□□□ -0.96
SMARCA4-208ENST00000585799 E9PLD3 99 aa9.05□□□□□ -0.96
SMARCA4-208ENST00000585799 SMAGPQ0VAQ4 97 aa9.05□□□□□ -0.96
SMARCA4-208ENST00000585799 NDUFA12Q9UI09 145 aa9.05□□□□□ -0.96
SMARCA4-208ENST00000585799 A8MZ25 164 aa9.05□□□□□ -0.96
SMARCA4-208ENST00000585799 CIRBPQ14011 172 aaKnown RBP9.05□□□□□ -0.96
SMARCA4-208ENST00000585799 C12orf74Q32Q52 190 aa9.05□□□□□ -0.96
SMARCA4-208ENST00000585799 IGLV4-3A0A075B6K6 122 aa9.04□□□□□ -0.96
SMARCA4-208ENST00000585799 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.04□□□□□ -0.96
SMARCA4-208ENST00000585799 K7ERU9 68 aa9.04□□□□□ -0.96
SMARCA4-208ENST00000585799 C16orf74Q96GX8 76 aa9.04□□□□□ -0.96
SMARCA4-208ENST00000585799 SLC25A29Q8N8R3 303 aa9.04□□□□□ -0.96
SMARCA4-208ENST00000585799 TRBV6-5A0A0K0K1A5 114 aa9.03□□□□□ -0.96
SMARCA4-208ENST00000585799 A0A1B0GWB2 263 aa9.03□□□□□ -0.96
SMARCA4-208ENST00000585799 DAD1P61803 113 aa9.03□□□□□ -0.96
SMARCA4-208ENST00000585799 DAND5Q8N907 189 aa9.03□□□□□ -0.96
SMARCA4-208ENST00000585799 C9orf66Q5T8R8 295 aa9.03□□□□□ -0.96
SMARCA4-208ENST00000585799 NDUFA11Q86Y39 141 aa9.03□□□□□ -0.96
SMARCA4-208ENST00000585799 NXPH4O95158 308 aa9.03□□□□□ -0.96
SMARCA4-208ENST00000585799 PRIMA1Q86XR5 153 aa9.03□□□□□ -0.96
SMARCA4-208ENST00000585799 GYPEP15421 78 aa9.02□□□□□ -0.96
SMARCA4-208ENST00000585799 MORN3Q6PF18 240 aaPredicted RBP9.02□□□□□ -0.96
SMARCA4-208ENST00000585799 A0A1W2PPM0 123 aa9.02□□□□□ -0.97
SMARCA4-208ENST00000585799 IGIPA6NJ69 53 aa9.02□□□□□ -0.97
SMARCA4-208ENST00000585799 IGLV1-51P01701 117 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms