RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 CRPP02741 224 aa11.25□□□□□ -0.61
ITGB4-213ENST00000584939 LINC01620Q4KN68 170 aa11.25□□□□□ -0.61
ITGB4-213ENST00000584939 RASL11AQ6T310 242 aa11.25□□□□□ -0.61
ITGB4-213ENST00000584939 NUP35Q8NFH5 326 aa11.25□□□□□ -0.61
ITGB4-213ENST00000584939 H7C1H1 209 aa11.24□□□□□ -0.61
ITGB4-213ENST00000584939 GAS8-AS1O95177 125 aa11.24□□□□□ -0.61
ITGB4-213ENST00000584939 GAGE6Q13070 117 aa11.24□□□□□ -0.61
ITGB4-213ENST00000584939 Q6ZSA8 131 aa11.24□□□□□ -0.61
ITGB4-213ENST00000584939 NIT2Q9NQR4 276 aa11.24□□□□□ -0.61
ITGB4-213ENST00000584939 TRBV25-1A0A075B6N4 114 aa11.23□□□□□ -0.61
ITGB4-213ENST00000584939 A0A1B0GUT8 65 aa11.23□□□□□ -0.61
ITGB4-213ENST00000584939 RBX1P62877 108 aa11.23□□□□□ -0.61
ITGB4-213ENST00000584939 RNF185Q96GF1 192 aa11.23□□□□□ -0.61
ITGB4-213ENST00000584939 IGHV1-24A0A0C4DH33 117 aa11.22□□□□□ -0.61
ITGB4-213ENST00000584939 SMIM27A0A1W2PRY6 76 aa11.22□□□□□ -0.61
ITGB4-213ENST00000584939 RAB14P61106 215 aa11.22□□□□□ -0.61
ITGB4-213ENST00000584939 IQCJQ1A5X6 159 aa11.22□□□□□ -0.61
ITGB4-213ENST00000584939 RPL39LQ96EH5 51 aaKnown RBP11.22□□□□□ -0.61
ITGB4-213ENST00000584939 MIAQ16674 131 aa11.21□□□□□ -0.61
ITGB4-213ENST00000584939 TMEM191AQ9H0A3 160 aa11.21□□□□□ -0.61
ITGB4-213ENST00000584939 DNAH8Q96JB1 4490 aa11.2□□□□□ -0.62
ITGB4-213ENST00000584939 FAT1Q14517 4588 aa11.2□□□□□ -0.62
ITGB4-213ENST00000584939 C14orf177Q52M58 125 aa11.2□□□□□ -0.62
ITGB4-213ENST00000584939 LINC00269Q8N2A0 174 aa11.2□□□□□ -0.62
ITGB4-213ENST00000584939 DEFB104AQ8WTQ1 72 aa11.2□□□□□ -0.62
ITGB4-213ENST00000584939 PRR34Q9NV39 138 aa11.2□□□□□ -0.62
ITGB4-213ENST00000584939 RAB4AP20338 218 aa11.19□□□□□ -0.62
ITGB4-213ENST00000584939 CLPSL2Q6UWE3 100 aa11.19□□□□□ -0.62
ITGB4-213ENST00000584939 USP17L23D6RBM5 183 aa11.18□□□□□ -0.62
ITGB4-213ENST00000584939 HLA-DQA1P01909 254 aa11.18□□□□□ -0.62
ITGB4-213ENST00000584939 NAT8BQ9UHF3 227 aa11.18□□□□□ -0.62
ITGB4-213ENST00000584939 ADCYAP1P18509 176 aa11.17□□□□□ -0.62
ITGB4-213ENST00000584939 SMIM15Q7Z3B0 74 aa11.17□□□□□ -0.62
ITGB4-213ENST00000584939 AMN1Q8IY45 258 aa11.17□□□□□ -0.62
ITGB4-213ENST00000584939 BORCS7Q96B45 105 aa11.17□□□□□ -0.62
ITGB4-213ENST00000584939 TMEM243Q9BU79 118 aa11.17□□□□□ -0.62
ITGB4-213ENST00000584939 TRBV6-5A0A0K0K1A5 114 aa11.16□□□□□ -0.62
ITGB4-213ENST00000584939 RPS10P46783 165 aaKnown RBP11.16□□□□□ -0.62
ITGB4-213ENST00000584939 RIGQ13278 110 aa11.16□□□□□ -0.62
ITGB4-213ENST00000584939 SCXQ7RTU7 201 aa11.16□□□□□ -0.62
ITGB4-213ENST00000584939 LINC00528Q8N1L1 170 aa11.16□□□□□ -0.62
ITGB4-213ENST00000584939 A0A1B0GXF2 115 aa11.15□□□□□ -0.62
ITGB4-213ENST00000584939 PLA2G1BP04054 148 aaKnown RBP11.15□□□□□ -0.62
ITGB4-213ENST00000584939 REG3AQ06141 175 aa11.15□□□□□ -0.62
ITGB4-213ENST00000584939 KRTAP26-1Q6PEX3 210 aa11.15□□□□□ -0.62
ITGB4-213ENST00000584939 CHAC1Q9BUX1 264 aa11.15□□□□□ -0.62
ITGB4-213ENST00000584939 VPS13BQ7Z7G8 4022 aa11.14□□□□□ -0.63
ITGB4-213ENST00000584939 A0A1B0GUV1 79 aa11.14□□□□□ -0.63
ITGB4-213ENST00000584939 PRSS1P07477 247 aa11.14□□□□□ -0.63
ITGB4-213ENST00000584939 C20orf203Q8NBC4 194 aa11.14□□□□□ -0.63
ITGB4-213ENST00000584939 IGLV4-60A0A075B6I1 120 aa11.13□□□□□ -0.63
ITGB4-213ENST00000584939 IGLV10-54A0A075B6I4 117 aa11.13□□□□□ -0.63
ITGB4-213ENST00000584939 SDHAF1A6NFY7 115 aa11.13□□□□□ -0.63
ITGB4-213ENST00000584939 SMKR1H3BMG3 65 aa11.13□□□□□ -0.63
ITGB4-213ENST00000584939 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
ITGB4-213ENST00000584939 COTL1Q14019 142 aa11.13□□□□□ -0.63
ITGB4-213ENST00000584939 TMEM218A2RU14 115 aa11.12□□□□□ -0.63
ITGB4-213ENST00000584939 UBE2L6O14933 153 aa11.12□□□□□ -0.63
ITGB4-213ENST00000584939 AMTP48728 403 aa11.12□□□□□ -0.63
ITGB4-213ENST00000584939 PNRC1Q12796 327 aaPredicted RBP11.12□□□□□ -0.63
ITGB4-213ENST00000584939 FAM104BQ5XKR9 115 aa11.12□□□□□ -0.63
ITGB4-213ENST00000584939 UQCC3Q6UW78 93 aa11.12□□□□□ -0.63
ITGB4-213ENST00000584939 NRACQ8N912 160 aa11.12□□□□□ -0.63
ITGB4-213ENST00000584939 MRAP2Q96G30 205 aa11.12□□□□□ -0.63
ITGB4-213ENST00000584939 TRAV8-4A0A0B4J246 113 aa11.11□□□□□ -0.63
ITGB4-213ENST00000584939 NCR2O95944 276 aa11.11□□□□□ -0.63
ITGB4-213ENST00000584939 MRPL51Q4U2R6 128 aaKnown RBP11.11□□□□□ -0.63
ITGB4-213ENST00000584939 DGAT2L7PQ6IED9 249 aa11.11□□□□□ -0.63
ITGB4-213ENST00000584939 MRPL54Q6P161 138 aaKnown RBP11.11□□□□□ -0.63
ITGB4-213ENST00000584939 CIRBP-AS1Q8TBR5 109 aa11.11□□□□□ -0.63
ITGB4-213ENST00000584939 PPP1R2P9O14990 202 aa11.1□□□□□ -0.63
ITGB4-213ENST00000584939 TSHBP01222 138 aa11.1□□□□□ -0.63
ITGB4-213ENST00000584939 CAMPP49913 170 aa11.1□□□□□ -0.63
ITGB4-213ENST00000584939 A0A1B0GW15 77 aa11.09□□□□□ -0.63
ITGB4-213ENST00000584939 LINC00862A6NCI5 91 aa11.09□□□□□ -0.63
ITGB4-213ENST00000584939 CLRN3Q8NCR9 226 aa11.09□□□□□ -0.63
ITGB4-213ENST00000584939 TRBV27A0A0K0K1C4 114 aa11.08□□□□□ -0.64
ITGB4-213ENST00000584939 ESDP10768 282 aa11.08□□□□□ -0.64
ITGB4-213ENST00000584939 HBBP68871 147 aa11.08□□□□□ -0.64
ITGB4-213ENST00000584939 COMMD7Q86VX2 200 aa11.08□□□□□ -0.64
ITGB4-213ENST00000584939 C9orf163Q8N9P6 203 aa11.08□□□□□ -0.64
ITGB4-213ENST00000584939 ANAPC16Q96DE5 110 aa11.08□□□□□ -0.64
ITGB4-213ENST00000584939 ST20Q9HBF5 79 aa11.08□□□□□ -0.64
ITGB4-213ENST00000584939 SRRM2Q9UQ35 2752 aaKnown RBP11.08□□□□□ -0.64
ITGB4-213ENST00000584939 I3L3M4 83 aa11.07□□□□□ -0.64
ITGB4-213ENST00000584939 MT-ND4LP03901 98 aa11.07□□□□□ -0.64
ITGB4-213ENST00000584939 FLG2Q5D862 2391 aaPredicted RBP11.07□□□□□ -0.64
ITGB4-213ENST00000584939 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.06□□□□□ -0.64
ITGB4-213ENST00000584939 IGKV2-29A2NJV5 120 aaPredicted RBP11.06□□□□□ -0.64
ITGB4-213ENST00000584939 PMCHP20382 165 aa11.06□□□□□ -0.64
ITGB4-213ENST00000584939 TMEM242Q9NWH2 141 aa11.06□□□□□ -0.64
ITGB4-213ENST00000584939 TRBV24-1A0A075B6N3 115 aa11.05□□□□□ -0.64
ITGB4-213ENST00000584939 hDV102S1A0JD36 115 aa11.05□□□□□ -0.64
ITGB4-213ENST00000584939 F8W036 122 aa11.05□□□□□ -0.64
ITGB4-213ENST00000584939 C10orf91Q5T1B1 145 aa11.05□□□□□ -0.64
ITGB4-213ENST00000584939 AMMECR1LQ6DCA0 310 aa11.05□□□□□ -0.64
ITGB4-213ENST00000584939 ATP5L2Q7Z4Y8 100 aa11.05□□□□□ -0.64
ITGB4-213ENST00000584939 SEC11CQ9BY50 192 aa11.05□□□□□ -0.64
ITGB4-213ENST00000584939 IGKV3OR2-268A0A0C4DH90 116 aa11.04□□□□□ -0.64
ITGB4-213ENST00000584939 APCSP02743 223 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms