RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 PRR34Q9NV39 138 aa11.74□□□□□ -0.53
ERBB2-221ENST00000584888 FAM30AQ9NZY2 134 aa11.74□□□□□ -0.53
ERBB2-221ENST00000584888 FAT1Q14517 4588 aa11.74□□□□□ -0.53
ERBB2-221ENST00000584888 A0A1B0GUT8 65 aa11.73□□□□□ -0.53
ERBB2-221ENST00000584888 SMIM15Q7Z3B0 74 aa11.73□□□□□ -0.53
ERBB2-221ENST00000584888 NAT8Q9UHE5 227 aa11.73□□□□□ -0.53
ERBB2-221ENST00000584888 LECT2O14960 151 aa11.72□□□□□ -0.53
ERBB2-221ENST00000584888 ANGP03950 147 aaKnown RBP11.72□□□□□ -0.53
ERBB2-221ENST00000584888 A0A1B0GUV1 79 aa11.71□□□□□ -0.53
ERBB2-221ENST00000584888 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
ERBB2-221ENST00000584888 TMEM243Q9BU79 118 aa11.71□□□□□ -0.53
ERBB2-221ENST00000584888 TMEM191AQ9H0A3 160 aa11.71□□□□□ -0.53
ERBB2-221ENST00000584888 FLG2Q5D862 2391 aaPredicted RBP11.71□□□□□ -0.54
ERBB2-221ENST00000584888 DMBT1Q9UGM3 2413 aaPredicted RBP11.7□□□□□ -0.54
ERBB2-221ENST00000584888 MIAQ16674 131 aa11.7□□□□□ -0.54
ERBB2-221ENST00000584888 KRTAP26-1Q6PEX3 210 aa11.7□□□□□ -0.54
ERBB2-221ENST00000584888 NUP35Q8NFH5 326 aa11.7□□□□□ -0.54
ERBB2-221ENST00000584888 RNF185Q96GF1 192 aa11.7□□□□□ -0.54
ERBB2-221ENST00000584888 TRBV6-5A0A0K0K1A5 114 aa11.69□□□□□ -0.54
ERBB2-221ENST00000584888 GAS8-AS1O95177 125 aa11.69□□□□□ -0.54
ERBB2-221ENST00000584888 COTL1Q14019 142 aa11.69□□□□□ -0.54
ERBB2-221ENST00000584888 ADIRFQ15847 76 aa11.69□□□□□ -0.54
ERBB2-221ENST00000584888 LINC00269Q8N2A0 174 aa11.69□□□□□ -0.54
ERBB2-221ENST00000584888 C20orf203Q8NBC4 194 aa11.69□□□□□ -0.54
ERBB2-221ENST00000584888 DEFB104AQ8WTQ1 72 aa11.69□□□□□ -0.54
ERBB2-221ENST00000584888 BORCS7Q96B45 105 aa11.69□□□□□ -0.54
ERBB2-221ENST00000584888 C1orf43Q9BWL3 253 aa11.69□□□□□ -0.54
ERBB2-221ENST00000584888 SMIM27A0A1W2PRY6 76 aa11.68□□□□□ -0.54
ERBB2-221ENST00000584888 CRPP02741 224 aa11.68□□□□□ -0.54
ERBB2-221ENST00000584888 RAB4AP20338 218 aa11.68□□□□□ -0.54
ERBB2-221ENST00000584888 VPS13BQ7Z7G8 4022 aa11.68□□□□□ -0.54
ERBB2-221ENST00000584888 IGLV4-60A0A075B6I1 120 aa11.67□□□□□ -0.54
ERBB2-221ENST00000584888 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.67□□□□□ -0.54
ERBB2-221ENST00000584888 NCR2O95944 276 aa11.67□□□□□ -0.54
ERBB2-221ENST00000584888 SDHAF1A6NFY7 115 aa11.66□□□□□ -0.54
ERBB2-221ENST00000584888 AMTP48728 403 aa11.66□□□□□ -0.54
ERBB2-221ENST00000584888 RIGQ13278 110 aa11.66□□□□□ -0.54
ERBB2-221ENST00000584888 Q6ZSA8 131 aa11.66□□□□□ -0.54
ERBB2-221ENST00000584888 NAT8BQ9UHF3 227 aa11.66□□□□□ -0.54
ERBB2-221ENST00000584888 SRRM2Q9UQ35 2752 aaKnown RBP11.65□□□□□ -0.54
ERBB2-221ENST00000584888 POLR2KP53803 58 aaKnown RBP11.64□□□□□ -0.55
ERBB2-221ENST00000584888 REG3AQ06141 175 aa11.64□□□□□ -0.55
ERBB2-221ENST00000584888 CLPSL2Q6UWE3 100 aa11.64□□□□□ -0.55
ERBB2-221ENST00000584888 AMN1Q8IY45 258 aa11.64□□□□□ -0.55
ERBB2-221ENST00000584888 MRAP2Q96G30 205 aa11.64□□□□□ -0.55
ERBB2-221ENST00000584888 HERC1Q15751 4861 aa11.63□□□□□ -0.55
ERBB2-221ENST00000584888 RPS10P46783 165 aaKnown RBP11.63□□□□□ -0.55
ERBB2-221ENST00000584888 LINC01620Q4KN68 170 aa11.63□□□□□ -0.55
ERBB2-221ENST00000584888 TRAV8-4A0A0B4J246 113 aa11.62□□□□□ -0.55
ERBB2-221ENST00000584888 H7C423 109 aa11.62□□□□□ -0.55
ERBB2-221ENST00000584888 I3L3M4 83 aa11.62□□□□□ -0.55
ERBB2-221ENST00000584888 ST20Q9HBF5 79 aa11.62□□□□□ -0.55
ERBB2-221ENST00000584888 TRBV27A0A0K0K1C4 114 aa11.61□□□□□ -0.55
ERBB2-221ENST00000584888 UBE2L6O14933 153 aa11.61□□□□□ -0.55
ERBB2-221ENST00000584888 TSHBP01222 138 aa11.61□□□□□ -0.55
ERBB2-221ENST00000584888 ESDP10768 282 aa11.61□□□□□ -0.55
ERBB2-221ENST00000584888 PMCHP20382 165 aa11.61□□□□□ -0.55
ERBB2-221ENST00000584888 C14orf177Q52M58 125 aa11.61□□□□□ -0.55
ERBB2-221ENST00000584888 NRACQ8N912 160 aa11.61□□□□□ -0.55
ERBB2-221ENST00000584888 USP17L23D6RBM5 183 aa11.6□□□□□ -0.55
ERBB2-221ENST00000584888 APCSP02743 223 aa11.6□□□□□ -0.55
ERBB2-221ENST00000584888 PLA2G1BP04054 148 aaKnown RBP11.6□□□□□ -0.55
ERBB2-221ENST00000584888 FAM104BQ5XKR9 115 aa11.6□□□□□ -0.55
ERBB2-221ENST00000584888 LINC00528Q8N1L1 170 aa11.6□□□□□ -0.55
ERBB2-221ENST00000584888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.59□□□□□ -0.55
ERBB2-221ENST00000584888 A0A1B0GW15 77 aa11.59□□□□□ -0.55
ERBB2-221ENST00000584888 IGKV2-29A2NJV5 120 aaPredicted RBP11.59□□□□□ -0.55
ERBB2-221ENST00000584888 SMKR1H3BMG3 65 aa11.59□□□□□ -0.55
ERBB2-221ENST00000584888 HLA-DQA1P01909 254 aa11.59□□□□□ -0.55
ERBB2-221ENST00000584888 RAB14P61106 215 aa11.59□□□□□ -0.55
ERBB2-221ENST00000584888 CLLU1Q5K131 121 aa11.59□□□□□ -0.55
ERBB2-221ENST00000584888 IGLV10-54A0A075B6I4 117 aa11.58□□□□□ -0.56
ERBB2-221ENST00000584888 A0A1B0GXF2 115 aa11.58□□□□□ -0.56
ERBB2-221ENST00000584888 PRSS1P07477 247 aa11.58□□□□□ -0.56
ERBB2-221ENST00000584888 IFITM2Q01629 132 aa11.58□□□□□ -0.56
ERBB2-221ENST00000584888 MRPL51Q4U2R6 128 aaKnown RBP11.58□□□□□ -0.56
ERBB2-221ENST00000584888 MYCBP2O75592 4640 aa11.57□□□□□ -0.56
ERBB2-221ENST00000584888 FGF6P10767 208 aa11.57□□□□□ -0.56
ERBB2-221ENST00000584888 SCXQ7RTU7 201 aa11.57□□□□□ -0.56
ERBB2-221ENST00000584888 TMEM242Q9NWH2 141 aa11.57□□□□□ -0.56
ERBB2-221ENST00000584888 PPP1R17O96001 155 aa11.56□□□□□ -0.56
ERBB2-221ENST00000584888 CAMPP49913 170 aa11.56□□□□□ -0.56
ERBB2-221ENST00000584888 LINC00862A6NCI5 91 aa11.55□□□□□ -0.56
ERBB2-221ENST00000584888 J3QL48 77 aa11.55□□□□□ -0.56
ERBB2-221ENST00000584888 VCYO14598 125 aa11.55□□□□□ -0.56
ERBB2-221ENST00000584888 ZNF25P17030 456 aaPredicted RBP11.55□□□□□ -0.56
ERBB2-221ENST00000584888 AMMECR1LQ6DCA0 310 aa11.55□□□□□ -0.56
ERBB2-221ENST00000584888 DGAT2L7PQ6IED9 249 aa11.55□□□□□ -0.56
ERBB2-221ENST00000584888 CHAC1Q9BUX1 264 aa11.55□□□□□ -0.56
ERBB2-221ENST00000584888 TRBV24-1A0A075B6N3 115 aa11.54□□□□□ -0.56
ERBB2-221ENST00000584888 PPP1R2P9O14990 202 aa11.54□□□□□ -0.56
ERBB2-221ENST00000584888 SUMO2P61956 95 aaKnown RBP11.54□□□□□ -0.56
ERBB2-221ENST00000584888 HBBP68871 147 aa11.54□□□□□ -0.56
ERBB2-221ENST00000584888 PNRC1Q12796 327 aaPredicted RBP11.54□□□□□ -0.56
ERBB2-221ENST00000584888 MRPL54Q6P161 138 aaKnown RBP11.54□□□□□ -0.56
ERBB2-221ENST00000584888 RNASEKQ6P5S7 137 aaKnown RBP11.54□□□□□ -0.56
ERBB2-221ENST00000584888 MRPL52Q86TS9 123 aaKnown RBP11.54□□□□□ -0.56
ERBB2-221ENST00000584888 CLRN3Q8NCR9 226 aa11.54□□□□□ -0.56
ERBB2-221ENST00000584888 RPL32P62910 135 aaKnown RBP11.53□□□□□ -0.56
ERBB2-221ENST00000584888 S100A8P05109 93 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms