RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 FAM231BA6NCW3 169 aa8.75□□□□□ -1.01
SREBF1-223ENST00000584760 RPL23P62829 140 aaKnown RBP8.75□□□□□ -1.01
SREBF1-223ENST00000584760 HAMPP81172 84 aa8.75□□□□□ -1.01
SREBF1-223ENST00000584760 FAM74A3Q4VXF1 159 aa8.75□□□□□ -1.01
SREBF1-223ENST00000584760 SMIM15Q7Z3B0 74 aa8.75□□□□□ -1.01
SREBF1-223ENST00000584760 ISOC2Q96AB3 205 aa8.75□□□□□ -1.01
SREBF1-223ENST00000584760 RPL39LQ96EH5 51 aaKnown RBP8.75□□□□□ -1.01
SREBF1-223ENST00000584760 TMEM243Q9BU79 118 aa8.75□□□□□ -1.01
SREBF1-223ENST00000584760 V9GYV3 84 aa8.75□□□□□ -1.01
SREBF1-223ENST00000584760 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.74□□□□□ -1.01
SREBF1-223ENST00000584760 A0A1B0GUT8 65 aa8.74□□□□□ -1.01
SREBF1-223ENST00000584760 MIAQ16674 131 aa8.74□□□□□ -1.01
SREBF1-223ENST00000584760 TMEM241Q24JQ0 296 aa8.74□□□□□ -1.01
SREBF1-223ENST00000584760 CLPSL2Q6UWE3 100 aa8.74□□□□□ -1.01
SREBF1-223ENST00000584760 C20orf203Q8NBC4 194 aa8.74□□□□□ -1.01
SREBF1-223ENST00000584760 BORCS7Q96B45 105 aa8.74□□□□□ -1.01
SREBF1-223ENST00000584760 TMEM70Q9BUB7 260 aa8.74□□□□□ -1.01
SREBF1-223ENST00000584760 SMDT1Q9H4I9 107 aa8.74□□□□□ -1.01
SREBF1-223ENST00000584760 MYCBP2O75592 4640 aa8.74□□□□□ -1.01
SREBF1-223ENST00000584760 COTL1Q14019 142 aa8.73□□□□□ -1.01
SREBF1-223ENST00000584760 PEA15Q15121 130 aa8.73□□□□□ -1.01
SREBF1-223ENST00000584760 LINC00269Q8N2A0 174 aa8.73□□□□□ -1.01
SREBF1-223ENST00000584760 DEFB104AQ8WTQ1 72 aa8.73□□□□□ -1.01
SREBF1-223ENST00000584760 NAT8Q9UHE5 227 aa8.73□□□□□ -1.01
SREBF1-223ENST00000584760 SRRM2Q9UQ35 2752 aaKnown RBP8.73□□□□□ -1.01
SREBF1-223ENST00000584760 A0A1B0GUV1 79 aa8.72□□□□□ -1.01
SREBF1-223ENST00000584760 AMTP48728 403 aa8.72□□□□□ -1.01
SREBF1-223ENST00000584760 ADIRFQ15847 76 aa8.72□□□□□ -1.01
SREBF1-223ENST00000584760 KRTAP26-1Q6PEX3 210 aa8.72□□□□□ -1.01
SREBF1-223ENST00000584760 TMEM191AQ9H0A3 160 aa8.72□□□□□ -1.01
SREBF1-223ENST00000584760 IGLV4-60A0A075B6I1 120 aa8.71□□□□□ -1.02
SREBF1-223ENST00000584760 GAS8-AS1O95177 125 aa8.71□□□□□ -1.02
SREBF1-223ENST00000584760 REG3AQ06141 175 aa8.71□□□□□ -1.02
SREBF1-223ENST00000584760 Q6ZSA8 131 aa8.71□□□□□ -1.02
SREBF1-223ENST00000584760 NUP35Q8NFH5 326 aa8.71□□□□□ -1.02
SREBF1-223ENST00000584760 RNF185Q96GF1 192 aa8.71□□□□□ -1.02
SREBF1-223ENST00000584760 FAM30AQ9NZY2 134 aa8.71□□□□□ -1.02
SREBF1-223ENST00000584760 TRBV6-5A0A0K0K1A5 114 aa8.7□□□□□ -1.02
SREBF1-223ENST00000584760 SDHAF1A6NFY7 115 aa8.7□□□□□ -1.02
SREBF1-223ENST00000584760 NCR2O95944 276 aa8.7□□□□□ -1.02
SREBF1-223ENST00000584760 HLA-DQA1P01909 254 aa8.7□□□□□ -1.02
SREBF1-223ENST00000584760 USP17L23D6RBM5 183 aa8.69□□□□□ -1.02
SREBF1-223ENST00000584760 UBE2L6O14933 153 aa8.69□□□□□ -1.02
SREBF1-223ENST00000584760 AMN1Q8IY45 258 aa8.69□□□□□ -1.02
SREBF1-223ENST00000584760 NAT8BQ9UHF3 227 aa8.69□□□□□ -1.02
SREBF1-223ENST00000584760 SMIM27A0A1W2PRY6 76 aa8.68□□□□□ -1.02
SREBF1-223ENST00000584760 APCSP02743 223 aa8.68□□□□□ -1.02
SREBF1-223ENST00000584760 RAB4AP20338 218 aa8.68□□□□□ -1.02
SREBF1-223ENST00000584760 RPS10P46783 165 aaKnown RBP8.68□□□□□ -1.02
SREBF1-223ENST00000584760 RIGQ13278 110 aa8.68□□□□□ -1.02
SREBF1-223ENST00000584760 LINC01620Q4KN68 170 aa8.68□□□□□ -1.02
SREBF1-223ENST00000584760 C14orf177Q52M58 125 aa8.68□□□□□ -1.02
SREBF1-223ENST00000584760 MRAP2Q96G30 205 aa8.68□□□□□ -1.02
SREBF1-223ENST00000584760 VPS13BQ7Z7G8 4022 aa8.67□□□□□ -1.02
SREBF1-223ENST00000584760 IGLV10-54A0A075B6I4 117 aa8.67□□□□□ -1.02
SREBF1-223ENST00000584760 TRAV8-4A0A0B4J246 113 aa8.66□□□□□ -1.02
SREBF1-223ENST00000584760 H7C423 109 aa8.66□□□□□ -1.02
SREBF1-223ENST00000584760 I3L3M4 83 aa8.66□□□□□ -1.02
SREBF1-223ENST00000584760 TSHBP01222 138 aa8.66□□□□□ -1.02
SREBF1-223ENST00000584760 ST20Q9HBF5 79 aa8.66□□□□□ -1.02
SREBF1-223ENST00000584760 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.65□□□□□ -1.02
SREBF1-223ENST00000584760 TRBV27A0A0K0K1C4 114 aa8.65□□□□□ -1.02
SREBF1-223ENST00000584760 IGKV2-29A2NJV5 120 aaPredicted RBP8.65□□□□□ -1.02
SREBF1-223ENST00000584760 PRSS1P07477 247 aa8.65□□□□□ -1.02
SREBF1-223ENST00000584760 ESDP10768 282 aa8.65□□□□□ -1.02
SREBF1-223ENST00000584760 POLR2KP53803 58 aaKnown RBP8.65□□□□□ -1.02
SREBF1-223ENST00000584760 NRACQ8N912 160 aa8.65□□□□□ -1.02
SREBF1-223ENST00000584760 TMEM242Q9NWH2 141 aa8.65□□□□□ -1.02
SREBF1-223ENST00000584760 SMKR1H3BMG3 65 aa8.64□□□□□ -1.03
SREBF1-223ENST00000584760 FGF6P10767 208 aa8.64□□□□□ -1.03
SREBF1-223ENST00000584760 PMCHP20382 165 aa8.64□□□□□ -1.03
SREBF1-223ENST00000584760 A0A1B0GW15 77 aa8.63□□□□□ -1.03
SREBF1-223ENST00000584760 KRTAP29-1A8MX34 341 aaPredicted RBP8.63□□□□□ -1.03
SREBF1-223ENST00000584760 ZNF25P17030 456 aaPredicted RBP8.63□□□□□ -1.03
SREBF1-223ENST00000584760 MRPL51Q4U2R6 128 aaKnown RBP8.63□□□□□ -1.03
SREBF1-223ENST00000584760 FAM104BQ5XKR9 115 aa8.63□□□□□ -1.03
SREBF1-223ENST00000584760 AMMECR1LQ6DCA0 310 aa8.63□□□□□ -1.03
SREBF1-223ENST00000584760 A0A1B0GXF2 115 aa8.62□□□□□ -1.03
SREBF1-223ENST00000584760 PPP1R17O96001 155 aa8.62□□□□□ -1.03
SREBF1-223ENST00000584760 CAMPP49913 170 aa8.62□□□□□ -1.03
SREBF1-223ENST00000584760 RAB14P61106 215 aa8.62□□□□□ -1.03
SREBF1-223ENST00000584760 SUMO2P61956 95 aaKnown RBP8.62□□□□□ -1.03
SREBF1-223ENST00000584760 RNASEKQ6P5S7 137 aaKnown RBP8.62□□□□□ -1.03
SREBF1-223ENST00000584760 SCXQ7RTU7 201 aa8.62□□□□□ -1.03
SREBF1-223ENST00000584760 IGKV3OR2-268A0A0C4DH90 116 aa8.61□□□□□ -1.03
SREBF1-223ENST00000584760 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
SREBF1-223ENST00000584760 CLLU1Q5K131 121 aa8.61□□□□□ -1.03
SREBF1-223ENST00000584760 DGAT2L7PQ6IED9 249 aa8.61□□□□□ -1.03
SREBF1-223ENST00000584760 MRPL54Q6P161 138 aaKnown RBP8.61□□□□□ -1.03
SREBF1-223ENST00000584760 CLRN3Q8NCR9 226 aa8.61□□□□□ -1.03
SREBF1-223ENST00000584760 C7orf77A4D0Y5 90 aa8.6□□□□□ -1.03
SREBF1-223ENST00000584760 HBBP68871 147 aa8.6□□□□□ -1.03
SREBF1-223ENST00000584760 PNRC1Q12796 327 aaPredicted RBP8.6□□□□□ -1.03
SREBF1-223ENST00000584760 SERTAD4-AS1Q5TG53 156 aa8.6□□□□□ -1.03
SREBF1-223ENST00000584760 MRPL52Q86TS9 123 aaKnown RBP8.6□□□□□ -1.03
SREBF1-223ENST00000584760 CHAC1Q9BUX1 264 aa8.6□□□□□ -1.03
SREBF1-223ENST00000584760 LINC00862A6NCI5 91 aa8.59□□□□□ -1.03
SREBF1-223ENST00000584760 GAGE12HA6NDE8 117 aa8.59□□□□□ -1.03
SREBF1-223ENST00000584760 VCYO14598 125 aa8.59□□□□□ -1.03
SREBF1-223ENST00000584760 PPP1R2P9O14990 202 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms