RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 DAZ3Q9NR90 486 aaKnown RBP9.84□□□□□ -0.83
UBBP4-202ENST00000584755 PRO0255Q9UI72 69 aa9.84□□□□□ -0.83
UBBP4-202ENST00000584755 ATP5LO75964 103 aa9.83□□□□□ -0.84
UBBP4-202ENST00000584755 PET117Q6UWS5 81 aa9.83□□□□□ -0.84
UBBP4-202ENST00000584755 C20orf203Q8NBC4 194 aa9.83□□□□□ -0.84
UBBP4-202ENST00000584755 CYSLTR1Q9Y271 337 aa9.83□□□□□ -0.84
UBBP4-202ENST00000584755 HUWE1Q7Z6Z7 4374 aaKnown RBP9.82□□□□□ -0.84
UBBP4-202ENST00000584755 LOC100131303A0A0U1RQF7 123 aa9.82□□□□□ -0.84
UBBP4-202ENST00000584755 GAGE12JA6NER3 117 aa9.82□□□□□ -0.84
UBBP4-202ENST00000584755 SCGB1D1O95968 90 aa9.82□□□□□ -0.84
UBBP4-202ENST00000584755 GAGE1Q13065 139 aa9.82□□□□□ -0.84
UBBP4-202ENST00000584755 GAGE4Q13068 117 aa9.82□□□□□ -0.84
UBBP4-202ENST00000584755 GAGE5Q13069 117 aa9.82□□□□□ -0.84
UBBP4-202ENST00000584755 C12orf74Q32Q52 190 aa9.82□□□□□ -0.84
UBBP4-202ENST00000584755 GAGE13Q4V321 117 aa9.82□□□□□ -0.84
UBBP4-202ENST00000584755 CDPF1Q6NVV7 123 aa9.82□□□□□ -0.84
UBBP4-202ENST00000584755 COTL1Q14019 142 aa9.81□□□□□ -0.84
UBBP4-202ENST00000584755 DEFB104AQ8WTQ1 72 aa9.81□□□□□ -0.84
UBBP4-202ENST00000584755 PHLDA1Q8WV24 401 aaPredicted RBP9.81□□□□□ -0.84
UBBP4-202ENST00000584755 CHCHD7Q9BUK0 85 aa9.81□□□□□ -0.84
UBBP4-202ENST00000584755 ZMAT4Q9H898 229 aa9.81□□□□□ -0.84
UBBP4-202ENST00000584755 IGHV3-38A0A0C4DH36 116 aa9.8□□□□□ -0.84
UBBP4-202ENST00000584755 A0A0J9YWU9 116 aa9.8□□□□□ -0.84
UBBP4-202ENST00000584755 IGIPA6NJ69 53 aa9.8□□□□□ -0.84
UBBP4-202ENST00000584755 LINC01545Q5VT33 79 aa9.8□□□□□ -0.84
UBBP4-202ENST00000584755 ERASQ7Z444 233 aa9.8□□□□□ -0.84
UBBP4-202ENST00000584755 GTSF1LQ9H1H1 148 aa9.8□□□□□ -0.84
UBBP4-202ENST00000584755 RPL39P62891 51 aaKnown RBP9.79□□□□□ -0.84
UBBP4-202ENST00000584755 TEX43Q6ZNM6 134 aa9.79□□□□□ -0.84
UBBP4-202ENST00000584755 MRAPQ8TCY5 172 aa9.79□□□□□ -0.84
UBBP4-202ENST00000584755 VSIG2Q96IQ7 327 aa9.79□□□□□ -0.84
UBBP4-202ENST00000584755 SCGB3A1Q96QR1 104 aa9.79□□□□□ -0.84
UBBP4-202ENST00000584755 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
UBBP4-202ENST00000584755 DNAH9Q9NYC9 4486 aa9.79□□□□□ -0.84
UBBP4-202ENST00000584755 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.79□□□□□ -0.84
UBBP4-202ENST00000584755 PAX4O43316 350 aa9.79□□□□□ -0.84
UBBP4-202ENST00000584755 GYPEP15421 78 aa9.79□□□□□ -0.84
UBBP4-202ENST00000584755 LGALS9CQ6DKI2 356 aa9.79□□□□□ -0.84
UBBP4-202ENST00000584755 NTM-AS1Q6ZSK4 140 aa9.79□□□□□ -0.84
UBBP4-202ENST00000584755 TMEM141Q96I45 108 aa9.79□□□□□ -0.84
UBBP4-202ENST00000584755 C20orf202A1L168 122 aa9.78□□□□□ -0.84
UBBP4-202ENST00000584755 B9D2Q9BPU9 175 aa9.78□□□□□ -0.84
UBBP4-202ENST00000584755 PYGO1Q9Y3Y4 419 aa9.78□□□□□ -0.84
UBBP4-202ENST00000584755 TRAV12-1A0A0B4J245 112 aa9.77□□□□□ -0.85
UBBP4-202ENST00000584755 F5H768 121 aa9.77□□□□□ -0.85
UBBP4-202ENST00000584755 NPSP0C0P6 89 aa9.77□□□□□ -0.85
UBBP4-202ENST00000584755 ODF1Q14990 250 aa9.76□□□□□ -0.85
UBBP4-202ENST00000584755 TMEM97Q5BJF2 176 aa9.76□□□□□ -0.85
UBBP4-202ENST00000584755 Q6ZN92 141 aa9.76□□□□□ -0.85
UBBP4-202ENST00000584755 BAALCQ8WXS3 180 aa9.76□□□□□ -0.85
UBBP4-202ENST00000584755 TRAV26-1A0A087WT03 109 aa9.75□□□□□ -0.85
UBBP4-202ENST00000584755 H0Y8G0 127 aa9.75□□□□□ -0.85
UBBP4-202ENST00000584755 PRSS1P07477 247 aa9.75□□□□□ -0.85
UBBP4-202ENST00000584755 Q6ZTC4 211 aa9.75□□□□□ -0.85
UBBP4-202ENST00000584755 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
UBBP4-202ENST00000584755 C11orf45Q8TAV5 145 aa9.75□□□□□ -0.85
UBBP4-202ENST00000584755 TIMM21Q9BVV7 248 aa9.75□□□□□ -0.85
UBBP4-202ENST00000584755 A0A087WX48 190 aa9.74□□□□□ -0.85
UBBP4-202ENST00000584755 H3BNG1 76 aa9.74□□□□□ -0.85
UBBP4-202ENST00000584755 FAM104AQ969W3 186 aa9.74□□□□□ -0.85
UBBP4-202ENST00000584755 SPANXA1Q9NS26 97 aa9.74□□□□□ -0.85
UBBP4-202ENST00000584755 UBE2D4Q9Y2X8 147 aa9.74□□□□□ -0.85
UBBP4-202ENST00000584755 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.73□□□□□ -0.85
UBBP4-202ENST00000584755 TRBV6-8A0A0A6YYG3 113 aa9.73□□□□□ -0.85
UBBP4-202ENST00000584755 A0A0J9YY99 117 aa9.73□□□□□ -0.85
UBBP4-202ENST00000584755 IGKV2-29A2NJV5 120 aaPredicted RBP9.73□□□□□ -0.85
UBBP4-202ENST00000584755 LINC00587B1AMM8 73 aa9.73□□□□□ -0.85
UBBP4-202ENST00000584755 H7C423 109 aa9.73□□□□□ -0.85
UBBP4-202ENST00000584755 HTN3P15516 51 aa9.73□□□□□ -0.85
UBBP4-202ENST00000584755 NANOS2P60321 138 aaKnown RBP9.73□□□□□ -0.85
UBBP4-202ENST00000584755 IGLV4-3A0A075B6K6 122 aa9.72□□□□□ -0.85
UBBP4-202ENST00000584755 TRBV25-1A0A075B6N4 114 aa9.72□□□□□ -0.85
UBBP4-202ENST00000584755 MRPL23Q16540 153 aaKnown RBP9.72□□□□□ -0.85
UBBP4-202ENST00000584755 MRPL52Q86TS9 123 aaKnown RBP9.72□□□□□ -0.85
UBBP4-202ENST00000584755 TMEM243Q9BU79 118 aa9.72□□□□□ -0.85
UBBP4-202ENST00000584755 CSDC2Q9Y534 153 aaKnown RBP9.72□□□□□ -0.85
UBBP4-202ENST00000584755 PRSS29PA6NIE9 313 aa9.72□□□□□ -0.85
UBBP4-202ENST00000584755 MRPS36P82909 103 aaKnown RBP9.72□□□□□ -0.85
UBBP4-202ENST00000584755 PMVKQ15126 192 aa9.72□□□□□ -0.85
UBBP4-202ENST00000584755 SH2D6Q7Z4S9 175 aa9.72□□□□□ -0.85
UBBP4-202ENST00000584755 PMCHL2Q9BQD1 86 aa9.72□□□□□ -0.85
UBBP4-202ENST00000584755 ICOSQ9Y6W8 199 aa9.72□□□□□ -0.85
UBBP4-202ENST00000584755 TRAV9-2A0A087WT02 112 aa9.71□□□□□ -0.86
UBBP4-202ENST00000584755 A0A096LPF7 62 aa9.71□□□□□ -0.86
UBBP4-202ENST00000584755 PAPPA-AS1Q5QFB9 102 aa9.71□□□□□ -0.86
UBBP4-202ENST00000584755 ATOH7Q8N100 152 aa9.71□□□□□ -0.86
UBBP4-202ENST00000584755 AMELXQ99217 191 aa9.71□□□□□ -0.86
UBBP4-202ENST00000584755 OPRPNQ99935 248 aaPredicted RBP9.71□□□□□ -0.86
UBBP4-202ENST00000584755 VAMP8Q9BV40 100 aa9.71□□□□□ -0.86
UBBP4-202ENST00000584755 CST9LQ9H4G1 147 aa9.71□□□□□ -0.86
UBBP4-202ENST00000584755 MRPL35Q9NZE8 188 aaKnown RBP9.71□□□□□ -0.86
UBBP4-202ENST00000584755 F8VRH5 84 aa9.7□□□□□ -0.86
UBBP4-202ENST00000584755 NHLRC4P0CG21 123 aaPredicted RBP9.7□□□□□ -0.86
UBBP4-202ENST00000584755 SMAGPQ0VAQ4 97 aa9.7□□□□□ -0.86
UBBP4-202ENST00000584755 ZNF664Q8N3J9 261 aa9.7□□□□□ -0.86
UBBP4-202ENST00000584755 MEGF8Q7Z7M0 2845 aa9.69□□□□□ -0.86
UBBP4-202ENST00000584755 DEFB131BA0A096LNP1 70 aa9.69□□□□□ -0.86
UBBP4-202ENST00000584755 DPM2O94777 84 aa9.69□□□□□ -0.86
UBBP4-202ENST00000584755 FGF6P10767 208 aa9.69□□□□□ -0.86
UBBP4-202ENST00000584755 LBHQ53QV2 105 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms