RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 IGLV5-52A0A0A0MRZ9 124 aa13.71□□□□□ -0.21
TOP3A-218ENST00000584669 RAB14P61106 215 aa13.71□□□□□ -0.21
TOP3A-218ENST00000584669 Q0VG73 95 aa13.71□□□□□ -0.21
TOP3A-218ENST00000584669 RNF185Q96GF1 192 aa13.71□□□□□ -0.21
TOP3A-218ENST00000584669 TMEM243Q9BU79 118 aa13.71□□□□□ -0.21
TOP3A-218ENST00000584669 TMEM191AQ9H0A3 160 aa13.71□□□□□ -0.21
TOP3A-218ENST00000584669 COX11Q9Y6N1 276 aa13.71□□□□□ -0.21
TOP3A-218ENST00000584669 CRPP02741 224 aa13.7□□□□□ -0.22
TOP3A-218ENST00000584669 HAMPP81172 84 aa13.7□□□□□ -0.22
TOP3A-218ENST00000584669 RIGQ13278 110 aa13.7□□□□□ -0.22
TOP3A-218ENST00000584669 COTL1Q14019 142 aa13.7□□□□□ -0.22
TOP3A-218ENST00000584669 Q5VSD8 79 aa13.7□□□□□ -0.22
TOP3A-218ENST00000584669 CLPSL2Q6UWE3 100 aa13.7□□□□□ -0.22
TOP3A-218ENST00000584669 NAT8BQ9UHF3 227 aa13.7□□□□□ -0.22
TOP3A-218ENST00000584669 SMIM27A0A1W2PRY6 76 aa13.69□□□□□ -0.22
TOP3A-218ENST00000584669 INAFM2P0DMQ5 153 aa13.69□□□□□ -0.22
TOP3A-218ENST00000584669 RAB4AP20338 218 aa13.69□□□□□ -0.22
TOP3A-218ENST00000584669 AMTP48728 403 aa13.69□□□□□ -0.22
TOP3A-218ENST00000584669 AMN1Q8IY45 258 aa13.69□□□□□ -0.22
TOP3A-218ENST00000584669 LINC00269Q8N2A0 174 aa13.68□□□□□ -0.22
TOP3A-218ENST00000584669 NTN5Q8WTR8 489 aaPredicted RBP13.68□□□□□ -0.22
TOP3A-218ENST00000584669 C1orf43Q9BWL3 253 aa13.68□□□□□ -0.22
TOP3A-218ENST00000584669 SDHAF1A6NFY7 115 aa13.67□□□□□ -0.22
TOP3A-218ENST00000584669 SMR3BP02814 79 aaPredicted RBP13.67□□□□□ -0.22
TOP3A-218ENST00000584669 IFITM2Q01629 132 aa13.67□□□□□ -0.22
TOP3A-218ENST00000584669 C20orf203Q8NBC4 194 aa13.67□□□□□ -0.22
TOP3A-218ENST00000584669 PRR34Q9NV39 138 aa13.67□□□□□ -0.22
TOP3A-218ENST00000584669 IGLV4-60A0A075B6I1 120 aa13.66□□□□□ -0.22
TOP3A-218ENST00000584669 RPS10P46783 165 aaKnown RBP13.66□□□□□ -0.22
TOP3A-218ENST00000584669 CLLU1Q5K131 121 aa13.66□□□□□ -0.22
TOP3A-218ENST00000584669 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.65□□□□□ -0.22
TOP3A-218ENST00000584669 TRBV6-5A0A0K0K1A5 114 aa13.65□□□□□ -0.22
TOP3A-218ENST00000584669 UBE2L6O14933 153 aa13.65□□□□□ -0.22
TOP3A-218ENST00000584669 MIAQ16674 131 aa13.65□□□□□ -0.22
TOP3A-218ENST00000584669 A0A1B0GUV1 79 aa13.64□□□□□ -0.23
TOP3A-218ENST00000584669 SMKR1H3BMG3 65 aa13.64□□□□□ -0.23
TOP3A-218ENST00000584669 MRAP2Q96G30 205 aa13.64□□□□□ -0.23
TOP3A-218ENST00000584669 NCR2O95944 276 aa13.63□□□□□ -0.23
TOP3A-218ENST00000584669 PMCHP20382 165 aa13.63□□□□□ -0.23
TOP3A-218ENST00000584669 REG3AQ06141 175 aa13.63□□□□□ -0.23
TOP3A-218ENST00000584669 ST20Q9HBF5 79 aa13.63□□□□□ -0.23
TOP3A-218ENST00000584669 DMBT1Q9UGM3 2413 aaPredicted RBP13.63□□□□□ -0.23
TOP3A-218ENST00000584669 HLA-DQA1P01909 254 aa13.62□□□□□ -0.23
TOP3A-218ENST00000584669 APCSP02743 223 aa13.62□□□□□ -0.23
TOP3A-218ENST00000584669 CAMPP49913 170 aa13.62□□□□□ -0.23
TOP3A-218ENST00000584669 TMEM70Q9BUB7 260 aa13.62□□□□□ -0.23
TOP3A-218ENST00000584669 FLG2Q5D862 2391 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-218ENST00000584669 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-218ENST00000584669 IGKV2-29A2NJV5 120 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-218ENST00000584669 I3L3M4 83 aa13.61□□□□□ -0.23
TOP3A-218ENST00000584669 MRPL54Q6P161 138 aaKnown RBP13.61□□□□□ -0.23
TOP3A-218ENST00000584669 KRTAP26-1Q6PEX3 210 aa13.61□□□□□ -0.23
TOP3A-218ENST00000584669 IGLV10-54A0A075B6I4 117 aa13.6□□□□□ -0.23
TOP3A-218ENST00000584669 TSHBP01222 138 aa13.6□□□□□ -0.23
TOP3A-218ENST00000584669 POLR2KP53803 58 aaKnown RBP13.6□□□□□ -0.23
TOP3A-218ENST00000584669 MRPL51Q4U2R6 128 aaKnown RBP13.6□□□□□ -0.23
TOP3A-218ENST00000584669 FAM104BQ5XKR9 115 aa13.6□□□□□ -0.23
TOP3A-218ENST00000584669 TMEM242Q9NWH2 141 aa13.6□□□□□ -0.23
TOP3A-218ENST00000584669 FAM229AH3BQW9 127 aa13.59□□□□□ -0.23
TOP3A-218ENST00000584669 NRACQ8N912 160 aa13.59□□□□□ -0.23
TOP3A-218ENST00000584669 A0A1B0GW15 77 aa13.58□□□□□ -0.24
TOP3A-218ENST00000584669 A0A1B0GXF2 115 aa13.57□□□□□ -0.24
TOP3A-218ENST00000584669 USP17L23D6RBM5 183 aa13.57□□□□□ -0.24
TOP3A-218ENST00000584669 PPP1R2P9O14990 202 aa13.57□□□□□ -0.24
TOP3A-218ENST00000584669 PNRC1Q12796 327 aaPredicted RBP13.57□□□□□ -0.24
TOP3A-218ENST00000584669 LINC01620Q4KN68 170 aa13.57□□□□□ -0.24
TOP3A-218ENST00000584669 AMMECR1LQ6DCA0 310 aa13.57□□□□□ -0.24
TOP3A-218ENST00000584669 RNASEKQ6P5S7 137 aaKnown RBP13.57□□□□□ -0.24
TOP3A-218ENST00000584669 TRBV27A0A0K0K1C4 114 aa13.56□□□□□ -0.24
TOP3A-218ENST00000584669 FGF6P10767 208 aa13.56□□□□□ -0.24
TOP3A-218ENST00000584669 HBBP68871 147 aa13.56□□□□□ -0.24
TOP3A-218ENST00000584669 FAM30AQ9NZY2 134 aa13.56□□□□□ -0.24
TOP3A-218ENST00000584669 H7C423 109 aa13.55□□□□□ -0.24
TOP3A-218ENST00000584669 ESDP10768 282 aa13.55□□□□□ -0.24
TOP3A-218ENST00000584669 TRAV8-4A0A0B4J246 113 aa13.54□□□□□ -0.24
TOP3A-218ENST00000584669 IGKV3OR2-268A0A0C4DH90 116 aa13.54□□□□□ -0.24
TOP3A-218ENST00000584669 PPP1R17O96001 155 aa13.54□□□□□ -0.24
TOP3A-218ENST00000584669 SUMO2P61956 95 aaKnown RBP13.54□□□□□ -0.24
TOP3A-218ENST00000584669 C14orf177Q52M58 125 aa13.54□□□□□ -0.24
TOP3A-218ENST00000584669 MT-ND4LP03901 98 aa13.53□□□□□ -0.24
TOP3A-218ENST00000584669 S100A8P05109 93 aa13.53□□□□□ -0.24
TOP3A-218ENST00000584669 ADCYAP1P18509 176 aa13.53□□□□□ -0.24
TOP3A-218ENST00000584669 FAT1Q14517 4588 aa13.52□□□□□ -0.24
TOP3A-218ENST00000584669 F8W036 122 aa13.52□□□□□ -0.25
TOP3A-218ENST00000584669 VCYO14598 125 aa13.52□□□□□ -0.25
TOP3A-218ENST00000584669 PRSS1P07477 247 aa13.52□□□□□ -0.25
TOP3A-218ENST00000584669 CKS2P33552 79 aa13.52□□□□□ -0.25
TOP3A-218ENST00000584669 ANAPC16Q96DE5 110 aa13.52□□□□□ -0.25
TOP3A-218ENST00000584669 LINC00862A6NCI5 91 aa13.51□□□□□ -0.25
TOP3A-218ENST00000584669 UQCC3Q6UW78 93 aa13.51□□□□□ -0.25
TOP3A-218ENST00000584669 D6R8Y8 96 aa13.5□□□□□ -0.25
TOP3A-218ENST00000584669 ZNF25P17030 456 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-218ENST00000584669 FCER1GP30273 86 aa13.5□□□□□ -0.25
TOP3A-218ENST00000584669 ATP5L2Q7Z4Y8 100 aa13.5□□□□□ -0.25
TOP3A-218ENST00000584669 TRBV24-1A0A075B6N3 115 aa13.49□□□□□ -0.25
TOP3A-218ENST00000584669 TMEM218A2RU14 115 aa13.49□□□□□ -0.25
TOP3A-218ENST00000584669 C7orf77A4D0Y5 90 aa13.49□□□□□ -0.25
TOP3A-218ENST00000584669 TNFRSF6BO95407 300 aa13.49□□□□□ -0.25
TOP3A-218ENST00000584669 SRRM2Q9UQ35 2752 aaKnown RBP13.48□□□□□ -0.25
TOP3A-218ENST00000584669 GAGE12HA6NDE8 117 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms