RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 TPPP3Q9BW30 176 aa8.3□□□□□ -1.08
COPS3-218ENST00000584216 IGKV3OR2-268A0A0C4DH90 116 aa8.29□□□□□ -1.08
COPS3-218ENST00000584216 PAGE4O60829 102 aa8.29□□□□□ -1.08
COPS3-218ENST00000584216 CACNG7P62955 275 aa8.29□□□□□ -1.08
COPS3-218ENST00000584216 CHCHD10Q8WYQ3 142 aaPredicted RBP8.29□□□□□ -1.08
COPS3-218ENST00000584216 NIT2Q9NQR4 276 aa8.29□□□□□ -1.08
COPS3-218ENST00000584216 ALG5Q9Y673 324 aa8.29□□□□□ -1.08
COPS3-218ENST00000584216 TRGC1P0CF51 173 aa8.28□□□□□ -1.08
COPS3-218ENST00000584216 RPS20P60866 119 aaKnown RBP8.28□□□□□ -1.08
COPS3-218ENST00000584216 AMMECR1LQ6DCA0 310 aa8.28□□□□□ -1.08
COPS3-218ENST00000584216 FER1L6-AS1Q8NA97 138 aa8.28□□□□□ -1.08
COPS3-218ENST00000584216 FXYD6-FXYD2A0A087WZ82 144 aa8.27□□□□□ -1.09
COPS3-218ENST00000584216 SCO2A0A1W2PP80 73 aa8.27□□□□□ -1.09
COPS3-218ENST00000584216 GIPP09681 153 aaPredicted RBP8.27□□□□□ -1.09
COPS3-218ENST00000584216 ZNF664Q8N3J9 261 aa8.27□□□□□ -1.09
COPS3-218ENST00000584216 XKRY2A2RUG3 117 aa8.26□□□□□ -1.09
COPS3-218ENST00000584216 F2Z2F3 143 aa8.26□□□□□ -1.09
COPS3-218ENST00000584216 CARD19Q96LW7 228 aa8.26□□□□□ -1.09
COPS3-218ENST00000584216 A0A0U1RQV1 116 aa8.25□□□□□ -1.09
COPS3-218ENST00000584216 H7C423 109 aa8.25□□□□□ -1.09
COPS3-218ENST00000584216 IGLC6P0CF74 106 aa8.25□□□□□ -1.09
COPS3-218ENST00000584216 TMUB2Q71RG4 321 aa8.25□□□□□ -1.09
COPS3-218ENST00000584216 PSORS1C2Q9UIG4 136 aa8.25□□□□□ -1.09
COPS3-218ENST00000584216 IGHV1-58A0A0C4DH39 117 aa8.24□□□□□ -1.09
COPS3-218ENST00000584216 NCR2O95944 276 aa8.24□□□□□ -1.09
COPS3-218ENST00000584216 FOXI1Q12951 378 aa8.24□□□□□ -1.09
COPS3-218ENST00000584216 Q5BKY6 102 aa8.24□□□□□ -1.09
COPS3-218ENST00000584216 RNASEKQ6P5S7 137 aaKnown RBP8.24□□□□□ -1.09
COPS3-218ENST00000584216 OR2D3Q8NGH3 330 aa8.24□□□□□ -1.09
COPS3-218ENST00000584216 SFT2D1Q8WV19 159 aa8.24□□□□□ -1.09
COPS3-218ENST00000584216 TRAV26-2A0A0B4J265 109 aa8.23□□□□□ -1.09
COPS3-218ENST00000584216 RPL35P42766 123 aaKnown RBP8.23□□□□□ -1.09
COPS3-218ENST00000584216 ZNF561-AS1K7EIQ3 104 aa8.22□□□□□ -1.09
COPS3-218ENST00000584216 ZNF25P17030 456 aaPredicted RBP8.22□□□□□ -1.09
COPS3-218ENST00000584216 ISOC2Q96AB3 205 aa8.22□□□□□ -1.09
COPS3-218ENST00000584216 BTF3L4Q96K17 158 aa8.22□□□□□ -1.09
COPS3-218ENST00000584216 UMAD1C9J7I0 102 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 APCSP02743 223 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 MT-ND6P03923 174 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 FGF6P10767 208 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 NTF3P20783 257 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 XCL1P47992 114 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 PTTG1IPP53801 180 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 SYCNQ0VAF6 134 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 KCNRGQ8N5I3 272 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 OR5A1Q8NGJ0 315 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 FAM213BQ8TBF2 198 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 MBD3L1Q8WWY6 194 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 TMEM101Q96IK0 257 aa8.21□□□□□ -1.1
COPS3-218ENST00000584216 LOC107984640A0A0U1RRK4 108 aa8.2□□□□□ -1.1
COPS3-218ENST00000584216 IFNA1P01562 189 aa8.2□□□□□ -1.1
COPS3-218ENST00000584216 SMIM12Q96EX1 92 aa8.2□□□□□ -1.1
COPS3-218ENST00000584216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.19□□□□□ -1.1
COPS3-218ENST00000584216 A0A1B0GV50 99 aa8.19□□□□□ -1.1
COPS3-218ENST00000584216 IGKV2-29A2NJV5 120 aaPredicted RBP8.19□□□□□ -1.1
COPS3-218ENST00000584216 CCL25O15444 150 aa8.19□□□□□ -1.1
COPS3-218ENST00000584216 GAGE2BQ13066 116 aa8.19□□□□□ -1.1
COPS3-218ENST00000584216 CENPWQ5EE01 88 aa8.19□□□□□ -1.1
COPS3-218ENST00000584216 LYZL1Q6UWQ5 148 aa8.19□□□□□ -1.1
COPS3-218ENST00000584216 BIN3Q9NQY0 253 aa8.19□□□□□ -1.1
COPS3-218ENST00000584216 CYTL1Q9NRR1 136 aa8.19□□□□□ -1.1
COPS3-218ENST00000584216 C19orf71A6NCJ1 209 aa8.18□□□□□ -1.1
COPS3-218ENST00000584216 CAMPP49913 170 aa8.18□□□□□ -1.1
COPS3-218ENST00000584216 EIF5AP63241 154 aaKnown RBP8.18□□□□□ -1.1
COPS3-218ENST00000584216 SS18Q15532 418 aa8.18□□□□□ -1.1
COPS3-218ENST00000584216 TWIST1Q15672 202 aa8.18□□□□□ -1.1
COPS3-218ENST00000584216 EIF5AL1Q6IS14 154 aaKnown RBP8.18□□□□□ -1.1
COPS3-218ENST00000584216 TEX261Q6UWH6 196 aa8.18□□□□□ -1.1
COPS3-218ENST00000584216 Q6ZNX1 250 aa8.18□□□□□ -1.1
COPS3-218ENST00000584216 DIRC1Q969H9 104 aa8.18□□□□□ -1.1
COPS3-218ENST00000584216 C11orf52Q96A22 123 aa8.18□□□□□ -1.1
COPS3-218ENST00000584216 LINC00526Q96FQ7 95 aa8.18□□□□□ -1.1
COPS3-218ENST00000584216 MANBALQ9NQG1 85 aa8.18□□□□□ -1.1
COPS3-218ENST00000584216 LPAP08519 4548 aa8.18□□□□□ -1.1
COPS3-218ENST00000584216 LINC00959A0A1B0GUT2 108 aa8.17□□□□□ -1.1
COPS3-218ENST00000584216 ARPC5O15511 151 aa8.17□□□□□ -1.1
COPS3-218ENST00000584216 H2AFB1P0C5Y9 115 aa8.17□□□□□ -1.1
COPS3-218ENST00000584216 GNG4P50150 75 aa8.17□□□□□ -1.1
COPS3-218ENST00000584216 C1orf137Q5JT78 98 aa8.17□□□□□ -1.1
COPS3-218ENST00000584216 CD164L2Q6UWJ8 174 aa8.17□□□□□ -1.1
COPS3-218ENST00000584216 SMIM15Q7Z3B0 74 aa8.17□□□□□ -1.1
COPS3-218ENST00000584216 C9orf62Q8N4C0 152 aa8.17□□□□□ -1.1
COPS3-218ENST00000584216 GATD1Q8NB37 220 aa8.17□□□□□ -1.1
COPS3-218ENST00000584216 KRTAP9-2Q9BYQ4 174 aa8.17□□□□□ -1.1
COPS3-218ENST00000584216 CTRLP40313 264 aa8.16□□□□□ -1.1
COPS3-218ENST00000584216 TSKUQ8WUA8 353 aa8.16□□□□□ -1.1
COPS3-218ENST00000584216 FAM210AQ96ND0 272 aa8.16□□□□□ -1.1
COPS3-218ENST00000584216 IGLV4-69A0A075B6H9 119 aa8.15□□□□□ -1.1
COPS3-218ENST00000584216 SDHAF1A6NFY7 115 aa8.15□□□□□ -1.1
COPS3-218ENST00000584216 APOMO95445 188 aa8.15□□□□□ -1.1
COPS3-218ENST00000584216 MALP21145 153 aa8.15□□□□□ -1.1
COPS3-218ENST00000584216 CCL20P78556 96 aa8.15□□□□□ -1.1
COPS3-218ENST00000584216 PRR26Q8N8Z3 221 aa8.15□□□□□ -1.1
COPS3-218ENST00000584216 CNFNQ9BYD5 112 aa8.15□□□□□ -1.1
COPS3-218ENST00000584216 A0A1W2PNN7 141 aa8.14□□□□□ -1.11
COPS3-218ENST00000584216 I3L3M4 83 aa8.14□□□□□ -1.11
COPS3-218ENST00000584216 C9orf116Q5BN46 136 aaPredicted RBP8.14□□□□□ -1.11
COPS3-218ENST00000584216 MRAP2Q96G30 205 aa8.14□□□□□ -1.11
COPS3-218ENST00000584216 GNG13Q9P2W3 67 aa8.14□□□□□ -1.11
COPS3-218ENST00000584216 MUC2Q02817 5179 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 228.8 ms