RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 TRBV7-3A0A075B6L6 115 aa7.25□□□□□ -1.25
MKS1-212ENST00000583577 IGLL5B9A064 214 aa7.25□□□□□ -1.25
MKS1-212ENST00000583577 IGLV1-51P01701 117 aa7.25□□□□□ -1.25
MKS1-212ENST00000583577 FXYD2P54710 66 aa7.25□□□□□ -1.25
MKS1-212ENST00000583577 C12orf74Q32Q52 190 aa7.25□□□□□ -1.25
MKS1-212ENST00000583577 C2orf66Q6UXQ4 117 aa7.25□□□□□ -1.25
MKS1-212ENST00000583577 UNQ9165/PRO28630Q6UXU0 137 aa7.25□□□□□ -1.25
MKS1-212ENST00000583577 SYT8Q8NBV8 401 aa7.25□□□□□ -1.25
MKS1-212ENST00000583577 ATP6V0E2Q8NHE4 81 aa7.25□□□□□ -1.25
MKS1-212ENST00000583577 RASL10AQ92737 203 aa7.25□□□□□ -1.25
MKS1-212ENST00000583577 HIST1H4GQ99525 98 aa7.25□□□□□ -1.25
MKS1-212ENST00000583577 KIR2DL4Q99706 377 aa7.25□□□□□ -1.25
MKS1-212ENST00000583577 SPANXB1Q9NS25 103 aaPredicted RBP7.25□□□□□ -1.25
MKS1-212ENST00000583577 DMBT1Q9UGM3 2413 aaPredicted RBP7.25□□□□□ -1.25
MKS1-212ENST00000583577 IGHV3OR16-8A0A075B7F1 116 aa7.24□□□□□ -1.25
MKS1-212ENST00000583577 GATA1P15976 413 aaPredicted RBP7.24□□□□□ -1.25
MKS1-212ENST00000583577 CRYBA4P53673 196 aa7.24□□□□□ -1.25
MKS1-212ENST00000583577 FXYD7P58549 80 aa7.24□□□□□ -1.25
MKS1-212ENST00000583577 RHOHQ15669 191 aa7.24□□□□□ -1.25
MKS1-212ENST00000583577 RRN3P1Q2M238 152 aa7.24□□□□□ -1.25
MKS1-212ENST00000583577 TM4SF20Q53R12 229 aa7.24□□□□□ -1.25
MKS1-212ENST00000583577 FAM159AQ6UWV7 190 aa7.24□□□□□ -1.25
MKS1-212ENST00000583577 RAB37Q96AX2 223 aa7.24□□□□□ -1.25
MKS1-212ENST00000583577 NHP2Q9NX24 153 aaKnown RBP7.24□□□□□ -1.25
MKS1-212ENST00000583577 ANXA2RQ3ZCQ2 193 aa7.23□□□□□ -1.25
MKS1-212ENST00000583577 PIK3CD-AS1Q5SR53 167 aa7.23□□□□□ -1.25
MKS1-212ENST00000583577 BAALCQ8WXS3 180 aa7.23□□□□□ -1.25
MKS1-212ENST00000583577 SPATA25Q9BR10 227 aa7.23□□□□□ -1.25
MKS1-212ENST00000583577 KIF25-AS1Q9Y6Z4 181 aa7.23□□□□□ -1.25
MKS1-212ENST00000583577 TRBV20-1A0A075B6N2 111 aa7.22□□□□□ -1.25
MKS1-212ENST00000583577 IGHV3-66A0A0C4DH42 116 aa7.22□□□□□ -1.25
MKS1-212ENST00000583577 TRBV27A0A0K0K1C4 114 aa7.22□□□□□ -1.25
MKS1-212ENST00000583577 C11orf86A6NJI1 115 aa7.22□□□□□ -1.25
MKS1-212ENST00000583577 DUSP14O95147 198 aaKnown RBP7.22□□□□□ -1.25
MKS1-212ENST00000583577 GAS8-AS1O95177 125 aa7.22□□□□□ -1.25
MKS1-212ENST00000583577 EDN2P20800 178 aa7.22□□□□□ -1.25
MKS1-212ENST00000583577 POLR2KP53803 58 aaKnown RBP7.22□□□□□ -1.25
MKS1-212ENST00000583577 PMVKQ15126 192 aa7.22□□□□□ -1.25
MKS1-212ENST00000583577 DEFB114Q30KQ6 69 aa7.22□□□□□ -1.25
MKS1-212ENST00000583577 WFDC3Q8IUB2 231 aa7.22□□□□□ -1.25
MKS1-212ENST00000583577 C20orf173Q96LM9 149 aa7.22□□□□□ -1.25
MKS1-212ENST00000583577 RHPN1-AS1Q9BWJ2 59 aa7.22□□□□□ -1.25
MKS1-212ENST00000583577 M0QXV9 152 aa7.21□□□□□ -1.26
MKS1-212ENST00000583577 RNASE3P12724 160 aaKnown RBP7.21□□□□□ -1.26
MKS1-212ENST00000583577 SNRPD3P62318 126 aaKnown RBP7.21□□□□□ -1.26
MKS1-212ENST00000583577 CD300EQ496F6 205 aaPredicted RBP7.21□□□□□ -1.26
MKS1-212ENST00000583577 GAGE13Q4V321 117 aa7.21□□□□□ -1.26
MKS1-212ENST00000583577 PRR9Q5T870 116 aa7.21□□□□□ -1.26
MKS1-212ENST00000583577 C14orf178Q8N769 122 aaPredicted RBP7.21□□□□□ -1.26
MKS1-212ENST00000583577 PKD1P98161 4303 aa7.2□□□□□ -1.26
MKS1-212ENST00000583577 TRAV26-2A0A0B4J265 109 aa7.2□□□□□ -1.26
MKS1-212ENST00000583577 TRAV25A0A0B4J276 109 aa7.2□□□□□ -1.26
MKS1-212ENST00000583577 PRSS29PA6NIE9 313 aa7.2□□□□□ -1.26
MKS1-212ENST00000583577 IGIPA6NJ69 53 aa7.2□□□□□ -1.26
MKS1-212ENST00000583577 RNASE4P34096 147 aaKnown RBP7.2□□□□□ -1.26
MKS1-212ENST00000583577 UBE2D1P51668 147 aa7.2□□□□□ -1.26
MKS1-212ENST00000583577 TRPT1Q86TN4 253 aaKnown RBP7.2□□□□□ -1.26
MKS1-212ENST00000583577 MAPKAPK5-AS1Q8N8E1 139 aa7.2□□□□□ -1.26
MKS1-212ENST00000583577 PTH2Q96A98 100 aa7.2□□□□□ -1.26
MKS1-212ENST00000583577 C9orf85Q96MD7 179 aa7.2□□□□□ -1.26
MKS1-212ENST00000583577 PRADC1Q9BSG0 188 aa7.2□□□□□ -1.26
MKS1-212ENST00000583577 SELENOKQ9Y6D0 94 aa7.2□□□□□ -1.26
MKS1-212ENST00000583577 SRRM2Q9UQ35 2752 aaKnown RBP7.2□□□□□ -1.26
MKS1-212ENST00000583577 IGHV3OR16-13A0A075B7E8 117 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 IGHV3-49A0A0A0MS15 119 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 IGHV3-74A0A0B4J1X5 117 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 TRAV2A0A0B4J234 112 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 ZNF815PA8K554 130 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 H3BMG7 143 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 MGPP08493 103 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 IGHV4-30-4P0DP06 118 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 LINC00315P59091 139 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 C21orf62-AS1Q17RA5 79 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 SCGB1D4Q6XE38 83 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 ZFP2Q6ZN57 461 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 NFE4Q86UQ8 179 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 TMEM61Q8N0U2 210 aa7.19□□□□□ -1.26
MKS1-212ENST00000583577 TRGV11A0A075B6L2 103 aa7.18□□□□□ -1.26
MKS1-212ENST00000583577 A0A0J9YX75 114 aa7.18□□□□□ -1.26
MKS1-212ENST00000583577 TCTAP57738 103 aa7.18□□□□□ -1.26
MKS1-212ENST00000583577 RPL11P62913 178 aaKnown RBP7.18□□□□□ -1.26
MKS1-212ENST00000583577 RPL24P83731 157 aaKnown RBP7.18□□□□□ -1.26
MKS1-212ENST00000583577 SRSF9Q13242 221 aaKnown RBP eCLIP7.18□□□□□ -1.26
MKS1-212ENST00000583577 ZNF876PQ49A33 203 aa7.18□□□□□ -1.26
MKS1-212ENST00000583577 MTURNQ8N3F0 131 aa7.18□□□□□ -1.26
MKS1-212ENST00000583577 DCANP1Q8TF63 244 aa7.18□□□□□ -1.26
MKS1-212ENST00000583577 SIGMAR1Q99720 223 aa7.18□□□□□ -1.26
MKS1-212ENST00000583577 FAM110AQ9BQ89 295 aa7.18□□□□□ -1.26
MKS1-212ENST00000583577 RETNQ9HD89 108 aa7.18□□□□□ -1.26
MKS1-212ENST00000583577 MDFICQ9P1T7 246 aa7.18□□□□□ -1.26
MKS1-212ENST00000583577 SLC25A29Q8N8R3 303 aa7.17□□□□□ -1.26
MKS1-212ENST00000583577 PLEKHB2Q96CS7 222 aa7.17□□□□□ -1.26
MKS1-212ENST00000583577 RPL39LQ96EH5 51 aaKnown RBP7.17□□□□□ -1.26
MKS1-212ENST00000583577 SPAG8Q99932 426 aaPredicted RBP7.17□□□□□ -1.26
MKS1-212ENST00000583577 PYGO1Q9Y3Y4 419 aa7.17□□□□□ -1.26
MKS1-212ENST00000583577 IGKV3-7A0A075B6H7 116 aa7.16□□□□□ -1.26
MKS1-212ENST00000583577 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.16□□□□□ -1.26
MKS1-212ENST00000583577 TEX48A0A1B0GUV7 120 aa7.16□□□□□ -1.26
MKS1-212ENST00000583577 SDHAF1A6NFY7 115 aa7.16□□□□□ -1.26
MKS1-212ENST00000583577 UBE2D3P61077 147 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms