RNA–Protein interactions for RNA: ENST00000583410.1

ARHGAP28-213, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 5

Gene ARHGAP28, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-213ENST00000583410 SRSF9Q13242 221 aaKnown RBP eCLIP11.33□□□□□ -0.6
ARHGAP28-213ENST00000583410 CFAP161Q6P656 301 aa11.33□□□□□ -0.6
ARHGAP28-213ENST00000583410 SPINK6Q6UWN8 80 aa11.33□□□□□ -0.6
ARHGAP28-213ENST00000583410 SFT2D1Q8WV19 159 aa11.33□□□□□ -0.6
ARHGAP28-213ENST00000583410 MBD3L1Q8WWY6 194 aa11.33□□□□□ -0.6
ARHGAP28-213ENST00000583410 UBE2L6O14933 153 aa11.32□□□□□ -0.6
ARHGAP28-213ENST00000583410 FER1L6-AS1Q8NA97 138 aa11.32□□□□□ -0.6
ARHGAP28-213ENST00000583410 NIT2Q9NQR4 276 aa11.32□□□□□ -0.6
ARHGAP28-213ENST00000583410 ARPC5O15511 151 aa11.31□□□□□ -0.6
ARHGAP28-213ENST00000583410 RPL35P42766 123 aaKnown RBP11.31□□□□□ -0.6
ARHGAP28-213ENST00000583410 AMTP48728 403 aa11.31□□□□□ -0.6
ARHGAP28-213ENST00000583410 FAM213BQ8TBF2 198 aa11.31□□□□□ -0.6
ARHGAP28-213ENST00000583410 CHCHD10Q8WYQ3 142 aaPredicted RBP11.31□□□□□ -0.6
ARHGAP28-213ENST00000583410 GVQW2A0A096LPI5 108 aaPredicted RBP11.3□□□□□ -0.6
ARHGAP28-213ENST00000583410 PFDN1O60925 122 aa11.3□□□□□ -0.6
ARHGAP28-213ENST00000583410 REG3GQ6UW15 175 aa11.3□□□□□ -0.6
ARHGAP28-213ENST00000583410 CACNG7P62955 275 aa11.29□□□□□ -0.6
ARHGAP28-213ENST00000583410 COTL1Q14019 142 aa11.29□□□□□ -0.6
ARHGAP28-213ENST00000583410 OR2D3Q8NGH3 330 aa11.29□□□□□ -0.6
ARHGAP28-213ENST00000583410 C19orf71A6NCJ1 209 aa11.28□□□□□ -0.6
ARHGAP28-213ENST00000583410 KCNRGQ8N5I3 272 aa11.28□□□□□ -0.6
ARHGAP28-213ENST00000583410 LINC00526Q96FQ7 95 aa11.28□□□□□ -0.6
ARHGAP28-213ENST00000583410 FOXI1Q12951 378 aa11.27□□□□□ -0.61
ARHGAP28-213ENST00000583410 LYZL1Q6UWQ5 148 aa11.27□□□□□ -0.61
ARHGAP28-213ENST00000583410 NTF3P20783 257 aa11.26□□□□□ -0.61
ARHGAP28-213ENST00000583410 CENPWQ5EE01 88 aa11.26□□□□□ -0.61
ARHGAP28-213ENST00000583410 Q6ZNX1 250 aa11.26□□□□□ -0.61
ARHGAP28-213ENST00000583410 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.25□□□□□ -0.61
ARHGAP28-213ENST00000583410 IGKV2-29A2NJV5 120 aaPredicted RBP11.25□□□□□ -0.61
ARHGAP28-213ENST00000583410 SMLR1H3BR10 107 aa11.25□□□□□ -0.61
ARHGAP28-213ENST00000583410 TRGC1P0CF51 173 aa11.25□□□□□ -0.61
ARHGAP28-213ENST00000583410 RPS20P60866 119 aaKnown RBP11.25□□□□□ -0.61
ARHGAP28-213ENST00000583410 CCL20P78556 96 aa11.25□□□□□ -0.61
ARHGAP28-213ENST00000583410 C11orf52Q96A22 123 aa11.25□□□□□ -0.61
ARHGAP28-213ENST00000583410 TRAV26-2A0A0B4J265 109 aa11.24□□□□□ -0.61
ARHGAP28-213ENST00000583410 RAB19A4D1S5 217 aa11.24□□□□□ -0.61
ARHGAP28-213ENST00000583410 Q6ZRP5 223 aa11.24□□□□□ -0.61
ARHGAP28-213ENST00000583410 GATD1Q8NB37 220 aa11.24□□□□□ -0.61
ARHGAP28-213ENST00000583410 F2Z2F3 143 aa11.23□□□□□ -0.61
ARHGAP28-213ENST00000583410 H2AFB1P0C5Y9 115 aa11.23□□□□□ -0.61
ARHGAP28-213ENST00000583410 AMMECR1LQ6DCA0 310 aa11.23□□□□□ -0.61
ARHGAP28-213ENST00000583410 RNASEKQ6P5S7 137 aaKnown RBP11.23□□□□□ -0.61
ARHGAP28-213ENST00000583410 RPL39LQ96EH5 51 aaKnown RBP11.23□□□□□ -0.61
ARHGAP28-213ENST00000583410 UMAD1C9J7I0 102 aa11.22□□□□□ -0.61
ARHGAP28-213ENST00000583410 LINC00474Q9P2X8 69 aa11.22□□□□□ -0.61
ARHGAP28-213ENST00000583410 IFNA1P01562 189 aa11.21□□□□□ -0.61
ARHGAP28-213ENST00000583410 FGF6P10767 208 aa11.21□□□□□ -0.61
ARHGAP28-213ENST00000583410 XCL1P47992 114 aa11.2□□□□□ -0.62
ARHGAP28-213ENST00000583410 C9orf62Q8N4C0 152 aa11.2□□□□□ -0.62
ARHGAP28-213ENST00000583410 CARD19Q96LW7 228 aa11.2□□□□□ -0.62
ARHGAP28-213ENST00000583410 GNG13Q9P2W3 67 aa11.2□□□□□ -0.62
ARHGAP28-213ENST00000583410 TRBV20OR9-2A0A075B6H5 130 aa11.19□□□□□ -0.62
ARHGAP28-213ENST00000583410 CTRLP40313 264 aa11.19□□□□□ -0.62
ARHGAP28-213ENST00000583410 OR5A1Q8NGJ0 315 aa11.19□□□□□ -0.62
ARHGAP28-213ENST00000583410 IGHV1-58A0A0C4DH39 117 aa11.18□□□□□ -0.62
ARHGAP28-213ENST00000583410 LINC00959A0A1B0GUT2 108 aa11.18□□□□□ -0.62
ARHGAP28-213ENST00000583410 FAM231BA6NCW3 169 aa11.18□□□□□ -0.62
ARHGAP28-213ENST00000583410 H7C423 109 aa11.18□□□□□ -0.62
ARHGAP28-213ENST00000583410 CCL25O15444 150 aa11.18□□□□□ -0.62
ARHGAP28-213ENST00000583410 FOXA3P55318 350 aaPredicted RBP11.18□□□□□ -0.62
ARHGAP28-213ENST00000583410 TWIST1Q15672 202 aa11.18□□□□□ -0.62
ARHGAP28-213ENST00000583410 A0A1W2PNN7 141 aa11.17□□□□□ -0.62
ARHGAP28-213ENST00000583410 XKRY2A2RUG3 117 aa11.17□□□□□ -0.62
ARHGAP28-213ENST00000583410 NCR2O95944 276 aa11.17□□□□□ -0.62
ARHGAP28-213ENST00000583410 APCSP02743 223 aa11.17□□□□□ -0.62
ARHGAP28-213ENST00000583410 GNG4P50150 75 aa11.17□□□□□ -0.62
ARHGAP28-213ENST00000583410 PTTG1IPP53801 180 aa11.17□□□□□ -0.62
ARHGAP28-213ENST00000583410 ZNF345Q14585 488 aa11.17□□□□□ -0.62
ARHGAP28-213ENST00000583410 NUDT10Q8NFP7 164 aa11.17□□□□□ -0.62
ARHGAP28-213ENST00000583410 NUDT11Q96G61 164 aa11.17□□□□□ -0.62
ARHGAP28-213ENST00000583410 CNFNQ9BYD5 112 aa11.17□□□□□ -0.62
ARHGAP28-213ENST00000583410 MANBALQ9NQG1 85 aa11.17□□□□□ -0.62
ARHGAP28-213ENST00000583410 SYCNQ0VAF6 134 aa11.16□□□□□ -0.62
ARHGAP28-213ENST00000583410 SDHAF1A6NFY7 115 aa11.15□□□□□ -0.62
ARHGAP28-213ENST00000583410 GAGE2BQ13066 116 aa11.15□□□□□ -0.62
ARHGAP28-213ENST00000583410 SMIM12Q96EX1 92 aa11.15□□□□□ -0.62
ARHGAP28-213ENST00000583410 PSORS1C2Q9UIG4 136 aa11.15□□□□□ -0.62
ARHGAP28-213ENST00000583410 PKIGQ9Y2B9 76 aa11.14□□□□□ -0.63
ARHGAP28-213ENST00000583410 BCL2L11O43521 198 aa11.13□□□□□ -0.63
ARHGAP28-213ENST00000583410 ZNF25P17030 456 aaPredicted RBP11.13□□□□□ -0.63
ARHGAP28-213ENST00000583410 MUC2Q02817 5179 aa11.13□□□□□ -0.63
ARHGAP28-213ENST00000583410 TRAV1-1A0A0B4J248 108 aa11.12□□□□□ -0.63
ARHGAP28-213ENST00000583410 ZNF561-AS1K7EIQ3 104 aa11.12□□□□□ -0.63
ARHGAP28-213ENST00000583410 BCL2P10415 239 aa11.12□□□□□ -0.63
ARHGAP28-213ENST00000583410 ESDP10768 282 aa11.12□□□□□ -0.63
ARHGAP28-213ENST00000583410 IGLV4-69A0A075B6H9 119 aa11.11□□□□□ -0.63
ARHGAP28-213ENST00000583410 LOC107984640A0A0U1RRK4 108 aa11.11□□□□□ -0.63
ARHGAP28-213ENST00000583410 CAMPP49913 170 aa11.11□□□□□ -0.63
ARHGAP28-213ENST00000583410 CD164L2Q6UWJ8 174 aa11.11□□□□□ -0.63
ARHGAP28-213ENST00000583410 RNASE7Q9H1E1 156 aaKnown RBP11.11□□□□□ -0.63
ARHGAP28-213ENST00000583410 MED9Q9NWA0 146 aa11.11□□□□□ -0.63
ARHGAP28-213ENST00000583410 KANTRA0A1W2PQU2 76 aa11.1□□□□□ -0.63
ARHGAP28-213ENST00000583410 HMSDA8MTL9 139 aa11.1□□□□□ -0.63
ARHGAP28-213ENST00000583410 I3L3M4 83 aa11.1□□□□□ -0.63
ARHGAP28-213ENST00000583410 TSHBP01222 138 aa11.1□□□□□ -0.63
ARHGAP28-213ENST00000583410 PMCHP20382 165 aa11.1□□□□□ -0.63
ARHGAP28-213ENST00000583410 MEF2BQ02080 365 aaPredicted RBP11.1□□□□□ -0.63
ARHGAP28-213ENST00000583410 PRR26Q8N8Z3 221 aa11.1□□□□□ -0.63
ARHGAP28-213ENST00000583410 TMEM101Q96IK0 257 aa11.1□□□□□ -0.63
ARHGAP28-213ENST00000583410 BTF3L4Q96K17 158 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms