RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 IGKV3OR2-268A0A0C4DH90 116 aa10.09□□□□□ -0.79
SREBF1-221ENST00000583080 H7C1H1 209 aa10.09□□□□□ -0.79
SREBF1-221ENST00000583080 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
SREBF1-221ENST00000583080 RPS10P46783 165 aaKnown RBP10.09□□□□□ -0.79
SREBF1-221ENST00000583080 STPG4Q8N801 248 aa10.09□□□□□ -0.79
SREBF1-221ENST00000583080 A0A096LNI7 61 aa10.08□□□□□ -0.8
SREBF1-221ENST00000583080 ARPC5O15511 151 aa10.08□□□□□ -0.8
SREBF1-221ENST00000583080 KRTAP10-8P60410 259 aa10.08□□□□□ -0.8
SREBF1-221ENST00000583080 SFT2D1Q8WV19 159 aa10.08□□□□□ -0.8
SREBF1-221ENST00000583080 PGLYRP4Q96LB8 373 aa10.08□□□□□ -0.8
SREBF1-221ENST00000583080 UBE2L6O14933 153 aa10.07□□□□□ -0.8
SREBF1-221ENST00000583080 AMTP48728 403 aa10.07□□□□□ -0.8
SREBF1-221ENST00000583080 RASL11AQ6T310 242 aa10.07□□□□□ -0.8
SREBF1-221ENST00000583080 FER1L6-AS1Q8NA97 138 aa10.07□□□□□ -0.8
SREBF1-221ENST00000583080 FAM213BQ8TBF2 198 aa10.07□□□□□ -0.8
SREBF1-221ENST00000583080 GAS8-AS1O95177 125 aa10.06□□□□□ -0.8
SREBF1-221ENST00000583080 RPL35P42766 123 aaKnown RBP10.06□□□□□ -0.8
SREBF1-221ENST00000583080 CFAP161Q6P656 301 aa10.06□□□□□ -0.8
SREBF1-221ENST00000583080 MBD3L1Q8WWY6 194 aa10.06□□□□□ -0.8
SREBF1-221ENST00000583080 TMUB2Q71RG4 321 aa10.05□□□□□ -0.8
SREBF1-221ENST00000583080 OR2D3Q8NGH3 330 aa10.05□□□□□ -0.8
SREBF1-221ENST00000583080 GVQW2A0A096LPI5 108 aaPredicted RBP10.04□□□□□ -0.8
SREBF1-221ENST00000583080 CACNG7P62955 275 aa10.04□□□□□ -0.8
SREBF1-221ENST00000583080 COTL1Q14019 142 aa10.04□□□□□ -0.8
SREBF1-221ENST00000583080 SPINK6Q6UWN8 80 aa10.04□□□□□ -0.8
SREBF1-221ENST00000583080 CHCHD10Q8WYQ3 142 aaPredicted RBP10.04□□□□□ -0.8
SREBF1-221ENST00000583080 NIT2Q9NQR4 276 aa10.04□□□□□ -0.8
SREBF1-221ENST00000583080 IFITM2Q01629 132 aa10.03□□□□□ -0.8
SREBF1-221ENST00000583080 CENPWQ5EE01 88 aa10.03□□□□□ -0.8
SREBF1-221ENST00000583080 REG3GQ6UW15 175 aa10.03□□□□□ -0.8
SREBF1-221ENST00000583080 KCNRGQ8N5I3 272 aa10.03□□□□□ -0.8
SREBF1-221ENST00000583080 LPAP08519 4548 aa10.01□□□□□ -0.81
SREBF1-221ENST00000583080 C19orf71A6NCJ1 209 aa10.01□□□□□ -0.81
SREBF1-221ENST00000583080 SMLR1H3BR10 107 aa10.01□□□□□ -0.81
SREBF1-221ENST00000583080 TRGC1P0CF51 173 aa10.01□□□□□ -0.81
SREBF1-221ENST00000583080 RPS20P60866 119 aaKnown RBP10.01□□□□□ -0.81
SREBF1-221ENST00000583080 SRSF9Q13242 221 aaKnown RBP eCLIP10.01□□□□□ -0.81
SREBF1-221ENST00000583080 C11orf52Q96A22 123 aa10.01□□□□□ -0.81
SREBF1-221ENST00000583080 LINC00526Q96FQ7 95 aa10.01□□□□□ -0.81
SREBF1-221ENST00000583080 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10□□□□□ -0.81
SREBF1-221ENST00000583080 TRAV26-2A0A0B4J265 109 aa10□□□□□ -0.81
SREBF1-221ENST00000583080 IGKV2-29A2NJV5 120 aaPredicted RBP10□□□□□ -0.81
SREBF1-221ENST00000583080 FOXI1Q12951 378 aa10□□□□□ -0.81
SREBF1-221ENST00000583080 LYZL1Q6UWQ5 148 aa10□□□□□ -0.81
SREBF1-221ENST00000583080 UMAD1C9J7I0 102 aa9.99□□□□□ -0.81
SREBF1-221ENST00000583080 NTF3P20783 257 aa9.99□□□□□ -0.81
SREBF1-221ENST00000583080 AMMECR1LQ6DCA0 310 aa9.99□□□□□ -0.81
SREBF1-221ENST00000583080 H2AFB1P0C5Y9 115 aa9.98□□□□□ -0.81
SREBF1-221ENST00000583080 CCL20P78556 96 aa9.98□□□□□ -0.81
SREBF1-221ENST00000583080 RNASEKQ6P5S7 137 aaKnown RBP9.98□□□□□ -0.81
SREBF1-221ENST00000583080 GATD1Q8NB37 220 aa9.98□□□□□ -0.81
SREBF1-221ENST00000583080 RAB19A4D1S5 217 aa9.97□□□□□ -0.81
SREBF1-221ENST00000583080 F2Z2F3 143 aa9.97□□□□□ -0.81
SREBF1-221ENST00000583080 CTRLP40313 264 aa9.97□□□□□ -0.81
SREBF1-221ENST00000583080 XCL1P47992 114 aa9.97□□□□□ -0.81
SREBF1-221ENST00000583080 Q6ZRP5 223 aa9.97□□□□□ -0.81
SREBF1-221ENST00000583080 RPL39LQ96EH5 51 aaKnown RBP9.97□□□□□ -0.81
SREBF1-221ENST00000583080 CARD19Q96LW7 228 aa9.97□□□□□ -0.81
SREBF1-221ENST00000583080 GNG13Q9P2W3 67 aa9.97□□□□□ -0.81
SREBF1-221ENST00000583080 LINC00474Q9P2X8 69 aa9.97□□□□□ -0.81
SREBF1-221ENST00000583080 IFNA1P01562 189 aa9.96□□□□□ -0.82
SREBF1-221ENST00000583080 FGF6P10767 208 aa9.96□□□□□ -0.82
SREBF1-221ENST00000583080 TRBV20OR9-2A0A075B6H5 130 aa9.95□□□□□ -0.82
SREBF1-221ENST00000583080 XKRY2A2RUG3 117 aa9.95□□□□□ -0.82
SREBF1-221ENST00000583080 GNG4P50150 75 aa9.95□□□□□ -0.82
SREBF1-221ENST00000583080 ZNF345Q14585 488 aa9.95□□□□□ -0.82
SREBF1-221ENST00000583080 MANBALQ9NQG1 85 aa9.95□□□□□ -0.82
SREBF1-221ENST00000583080 LINC00862A6NCI5 91 aa9.94□□□□□ -0.82
SREBF1-221ENST00000583080 APCSP02743 223 aa9.94□□□□□ -0.82
SREBF1-221ENST00000583080 C9orf62Q8N4C0 152 aa9.94□□□□□ -0.82
SREBF1-221ENST00000583080 MED9Q9NWA0 146 aa9.94□□□□□ -0.82
SREBF1-221ENST00000583080 IGHV1-58A0A0C4DH39 117 aa9.93□□□□□ -0.82
SREBF1-221ENST00000583080 CCL25O15444 150 aa9.93□□□□□ -0.82
SREBF1-221ENST00000583080 NCR2O95944 276 aa9.93□□□□□ -0.82
SREBF1-221ENST00000583080 TWIST1Q15672 202 aa9.93□□□□□ -0.82
SREBF1-221ENST00000583080 OR5A1Q8NGJ0 315 aa9.93□□□□□ -0.82
SREBF1-221ENST00000583080 CNFNQ9BYD5 112 aa9.93□□□□□ -0.82
SREBF1-221ENST00000583080 LINC00959A0A1B0GUT2 108 aa9.92□□□□□ -0.82
SREBF1-221ENST00000583080 H7C423 109 aa9.92□□□□□ -0.82
SREBF1-221ENST00000583080 BCL2L11O43521 198 aa9.92□□□□□ -0.82
SREBF1-221ENST00000583080 PTTG1IPP53801 180 aa9.92□□□□□ -0.82
SREBF1-221ENST00000583080 FOXA3P55318 350 aaPredicted RBP9.92□□□□□ -0.82
SREBF1-221ENST00000583080 SMIM12Q96EX1 92 aa9.92□□□□□ -0.82
SREBF1-221ENST00000583080 PKIGQ9Y2B9 76 aa9.92□□□□□ -0.82
SREBF1-221ENST00000583080 SDHAF1A6NFY7 115 aa9.91□□□□□ -0.82
SREBF1-221ENST00000583080 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
SREBF1-221ENST00000583080 NUDT10Q8NFP7 164 aa9.91□□□□□ -0.82
SREBF1-221ENST00000583080 NUDT11Q96G61 164 aa9.91□□□□□ -0.82
SREBF1-221ENST00000583080 FAM231BA6NCW3 169 aa9.9□□□□□ -0.82
SREBF1-221ENST00000583080 ZNF25P17030 456 aaPredicted RBP9.9□□□□□ -0.82
SREBF1-221ENST00000583080 GAGE2BQ13066 116 aa9.9□□□□□ -0.82
SREBF1-221ENST00000583080 CLLU1Q5K131 121 aa9.9□□□□□ -0.82
SREBF1-221ENST00000583080 A0A1W2PNN7 141 aa9.89□□□□□ -0.83
SREBF1-221ENST00000583080 KANTRA0A1W2PQU2 76 aa9.89□□□□□ -0.83
SREBF1-221ENST00000583080 RAB14P61106 215 aa9.89□□□□□ -0.83
SREBF1-221ENST00000583080 SLC7A5P1Q8MH63 180 aa9.89□□□□□ -0.83
SREBF1-221ENST00000583080 TRAV1-1A0A0B4J248 108 aa9.88□□□□□ -0.83
SREBF1-221ENST00000583080 ZNF561-AS1K7EIQ3 104 aa9.88□□□□□ -0.83
SREBF1-221ENST00000583080 BCL2P10415 239 aa9.88□□□□□ -0.83
SREBF1-221ENST00000583080 CAMPP49913 170 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms