RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 VPS13DQ5THJ4 4388 aa7.9□□□□□ -1.15
GGA3-211ENST00000582232 TRBV25-1A0A075B6N4 114 aa7.89□□□□□ -1.15
GGA3-211ENST00000582232 IGHV1-24A0A0C4DH33 117 aa7.89□□□□□ -1.15
GGA3-211ENST00000582232 ESDP10768 282 aa7.89□□□□□ -1.15
GGA3-211ENST00000582232 IFI27P40305 119 aaPredicted RBP7.89□□□□□ -1.15
GGA3-211ENST00000582232 Q0VG73 95 aa7.89□□□□□ -1.15
GGA3-211ENST00000582232 ALMS1Q8TCU4 4167 aa7.88□□□□□ -1.15
GGA3-211ENST00000582232 TRAV8-6A0A0B4J262 113 aa7.88□□□□□ -1.15
GGA3-211ENST00000582232 H7C423 109 aa7.88□□□□□ -1.15
GGA3-211ENST00000582232 FCER1GP30273 86 aa7.88□□□□□ -1.15
GGA3-211ENST00000582232 AMTP48728 403 aa7.88□□□□□ -1.15
GGA3-211ENST00000582232 PRSS3P2Q8NHM4 247 aa7.88□□□□□ -1.15
GGA3-211ENST00000582232 CHCHD7Q9BUK0 85 aa7.88□□□□□ -1.15
GGA3-211ENST00000582232 DNAH1Q9P2D7 4330 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 HIST1H2BKO60814 126 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 HIST1H2BJP06899 126 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 LINC00614P0C842 121 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 HIST1H2BOP23527 126 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 HIST1H2BBP33778 126 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 HIST1H2BDP58876 126 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 RAB5BP61020 215 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 HIST1H2BCP62807 126 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 LAGE3Q14657 143 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 HIST2H2BEQ16778 126 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 ORMDL2Q53FV1 153 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.87□□□□□ -1.15
GGA3-211ENST00000582232 HIST1H2BHQ93079 126 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 URB1-AS1Q96HZ7 61 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 HIST1H2BNQ99877 126 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 HIST1H2BMQ99879 126 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 TMEM243Q9BU79 118 aa7.87□□□□□ -1.15
GGA3-211ENST00000582232 C1orf196B1AJZ1 125 aa7.86□□□□□ -1.15
GGA3-211ENST00000582232 PKIAP61925 76 aa7.86□□□□□ -1.15
GGA3-211ENST00000582232 FA2HQ7L5A8 372 aa7.86□□□□□ -1.15
GGA3-211ENST00000582232 NIT1Q86X76 327 aa7.86□□□□□ -1.15
GGA3-211ENST00000582232 UBE2DNLQ8IWF7 75 aa7.86□□□□□ -1.15
GGA3-211ENST00000582232 C20orf203Q8NBC4 194 aa7.86□□□□□ -1.15
GGA3-211ENST00000582232 DEFB104AQ8WTQ1 72 aa7.86□□□□□ -1.15
GGA3-211ENST00000582232 SIVA1O15304 175 aa7.85□□□□□ -1.15
GGA3-211ENST00000582232 DNAH10OSP0CZ25 163 aa7.85□□□□□ -1.15
GGA3-211ENST00000582232 G0S2P27469 103 aa7.85□□□□□ -1.15
GGA3-211ENST00000582232 LINC01556Q5JQF7 62 aa7.85□□□□□ -1.15
GGA3-211ENST00000582232 WFDC10BQ8IUB3 73 aa7.85□□□□□ -1.15
GGA3-211ENST00000582232 LINC00476Q8WZB0 136 aa7.85□□□□□ -1.15
GGA3-211ENST00000582232 CHCHD1Q96BP2 118 aaKnown RBP7.85□□□□□ -1.15
GGA3-211ENST00000582232 CHCHD5Q9BSY4 110 aa7.85□□□□□ -1.15
GGA3-211ENST00000582232 AP5S1Q9NUS5 200 aa7.85□□□□□ -1.15
GGA3-211ENST00000582232 DNAH6Q9C0G6 4158 aa7.85□□□□□ -1.15
GGA3-211ENST00000582232 A0A1B0GUV1 79 aa7.84□□□□□ -1.15
GGA3-211ENST00000582232 K7EP13 123 aa7.84□□□□□ -1.15
GGA3-211ENST00000582232 MRPL52Q86TS9 123 aaKnown RBP7.84□□□□□ -1.15
GGA3-211ENST00000582232 BAGE3Q86Y29 109 aa7.84□□□□□ -1.15
GGA3-211ENST00000582232 TMEM18Q96B42 140 aa7.84□□□□□ -1.15
GGA3-211ENST00000582232 Q9H8V8 135 aa7.84□□□□□ -1.15
GGA3-211ENST00000582232 SACSQ9NZJ4 4579 aa7.83□□□□□ -1.16
GGA3-211ENST00000582232 KMT2AQ03164 3969 aa7.83□□□□□ -1.16
GGA3-211ENST00000582232 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.83□□□□□ -1.16
GGA3-211ENST00000582232 IGKV2-29A2NJV5 120 aaPredicted RBP7.83□□□□□ -1.16
GGA3-211ENST00000582232 LINC01549A6NIU2 74 aa7.83□□□□□ -1.16
GGA3-211ENST00000582232 UBE2L6O14933 153 aa7.83□□□□□ -1.16
GGA3-211ENST00000582232 ZNF25P17030 456 aaPredicted RBP7.83□□□□□ -1.16
GGA3-211ENST00000582232 SMAGPQ0VAQ4 97 aa7.83□□□□□ -1.16
GGA3-211ENST00000582232 COA6Q5JTJ3 125 aaKnown RBP7.83□□□□□ -1.16
GGA3-211ENST00000582232 TIMM21Q9BVV7 248 aa7.83□□□□□ -1.16
GGA3-211ENST00000582232 CSDC2Q9Y534 153 aaKnown RBP7.83□□□□□ -1.16
GGA3-211ENST00000582232 LINC00310P59036 64 aa7.82□□□□□ -1.16
GGA3-211ENST00000582232 GAGE6Q13070 117 aa7.82□□□□□ -1.16
GGA3-211ENST00000582232 RNASEKQ6P5S7 137 aaKnown RBP7.82□□□□□ -1.16
GGA3-211ENST00000582232 C2orf66Q6UXQ4 117 aa7.82□□□□□ -1.16
GGA3-211ENST00000582232 CYSLTR1Q9Y271 337 aa7.82□□□□□ -1.16
GGA3-211ENST00000582232 PYGO1Q9Y3Y4 419 aa7.82□□□□□ -1.16
GGA3-211ENST00000582232 A0A087WX48 190 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 A0A096LNJ9 63 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 TMEM262E9PQX1 116 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 SERF1AO75920 110 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 LY6G6CO95867 125 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 NPSP0C0P6 89 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 FGF6P10767 208 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 RBX1P62877 108 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 RPL39P62891 51 aaKnown RBP7.81□□□□□ -1.16
GGA3-211ENST00000582232 MPV17L2Q567V2 206 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 TOMM6Q96B49 74 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 SPANXA1Q9NS26 97 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 UBE2D4Q9Y2X8 147 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 RYR2Q92736 4967 aa7.81□□□□□ -1.16
GGA3-211ENST00000582232 TRAV9-2A0A087WT02 112 aa7.8□□□□□ -1.16
GGA3-211ENST00000582232 AMMECR1LQ6DCA0 310 aa7.8□□□□□ -1.16
GGA3-211ENST00000582232 LCE6AA0A183 80 aa7.79□□□□□ -1.16
GGA3-211ENST00000582232 IGIPA6NJ69 53 aa7.79□□□□□ -1.16
GGA3-211ENST00000582232 NUPR1O60356 82 aa7.79□□□□□ -1.16
GGA3-211ENST00000582232 HSBP1O75506 76 aa7.79□□□□□ -1.16
GGA3-211ENST00000582232 HBDP02042 147 aa7.79□□□□□ -1.16
GGA3-211ENST00000582232 BTF3P20290 206 aaKnown RBP7.79□□□□□ -1.16
GGA3-211ENST00000582232 MRPS36P82909 103 aaKnown RBP7.79□□□□□ -1.16
GGA3-211ENST00000582232 TTC32Q5I0X7 151 aa7.79□□□□□ -1.16
GGA3-211ENST00000582232 Q8N3U1 123 aa7.79□□□□□ -1.16
GGA3-211ENST00000582232 C10orf126Q8N4M7 172 aa7.79□□□□□ -1.16
GGA3-211ENST00000582232 Q8N976 141 aa7.79□□□□□ -1.16
GGA3-211ENST00000582232 TMEM101Q96IK0 257 aa7.79□□□□□ -1.16
GGA3-211ENST00000582232 IGLV4-60A0A075B6I1 120 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms