RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 FAM231DQ6ZW35 169 aa14.5□□□□□ -0.09
CASC3-207ENST00000581849 CLRN3Q8NCR9 226 aa14.5□□□□□ -0.09
CASC3-207ENST00000581849 NDUFS6O75380 124 aaKnown RBP14.49□□□□□ -0.09
CASC3-207ENST00000581849 PRSS1P07477 247 aa14.49□□□□□ -0.09
CASC3-207ENST00000581849 ALKAL2Q6UX46 152 aa14.49□□□□□ -0.09
CASC3-207ENST00000581849 CIRBP-AS1Q8TBR5 109 aa14.49□□□□□ -0.09
CASC3-207ENST00000581849 SMIM15Q7Z3B0 74 aa14.48□□□□□ -0.09
CASC3-207ENST00000581849 C9orf163Q8N9P6 203 aa14.48□□□□□ -0.09
CASC3-207ENST00000581849 DEFB104AQ8WTQ1 72 aa14.48□□□□□ -0.09
CASC3-207ENST00000581849 GTSF1Q8WW33 167 aa14.48□□□□□ -0.09
CASC3-207ENST00000581849 UBE2L6O14933 153 aa14.47□□□□□ -0.09
CASC3-207ENST00000581849 CT83Q5H943 113 aa14.47□□□□□ -0.09
CASC3-207ENST00000581849 TEX261Q6UWH6 196 aa14.47□□□□□ -0.09
CASC3-207ENST00000581849 A8MWL6 223 aa14.46□□□□□ -0.09
CASC3-207ENST00000581849 AMTP48728 403 aa14.46□□□□□ -0.09
CASC3-207ENST00000581849 GATD1Q8NB37 220 aa14.46□□□□□ -0.09
CASC3-207ENST00000581849 IGLV4-60A0A075B6I1 120 aa14.45□□□□□ -0.1
CASC3-207ENST00000581849 GATCO43716 136 aaKnown RBP14.45□□□□□ -0.1
CASC3-207ENST00000581849 NCR2O95944 276 aa14.45□□□□□ -0.1
CASC3-207ENST00000581849 FOXA3P55318 350 aaPredicted RBP14.44□□□□□ -0.1
CASC3-207ENST00000581849 IGLV10-54A0A075B6I4 117 aa14.43□□□□□ -0.1
CASC3-207ENST00000581849 CNBPP62633 177 aaKnown RBP14.43□□□□□ -0.1
CASC3-207ENST00000581849 H7C423 109 aa14.42□□□□□ -0.1
CASC3-207ENST00000581849 KRTAP10-4P60372 401 aaPredicted RBP14.42□□□□□ -0.1
CASC3-207ENST00000581849 GFRA4Q9GZZ7 299 aa14.42□□□□□ -0.1
CASC3-207ENST00000581849 hCG_2014768A0A024R1R8 64 aa14.41□□□□□ -0.1
CASC3-207ENST00000581849 TRAV26-2A0A0B4J265 109 aa14.41□□□□□ -0.1
CASC3-207ENST00000581849 KRTAP29-1A8MX34 341 aaPredicted RBP14.41□□□□□ -0.1
CASC3-207ENST00000581849 J3QL48 77 aa14.4□□□□□ -0.1
CASC3-207ENST00000581849 FAM210AQ96ND0 272 aa14.4□□□□□ -0.1
CASC3-207ENST00000581849 FAM231BA6NCW3 169 aa14.39□□□□□ -0.11
CASC3-207ENST00000581849 BORCS7Q96B45 105 aa14.39□□□□□ -0.11
CASC3-207ENST00000581849 RPL39LQ96EH5 51 aaKnown RBP14.39□□□□□ -0.11
CASC3-207ENST00000581849 SMIM7Q9BQ49 75 aa14.39□□□□□ -0.11
CASC3-207ENST00000581849 TRBV6-5A0A0K0K1A5 114 aa14.38□□□□□ -0.11
CASC3-207ENST00000581849 APCSP02743 223 aa14.38□□□□□ -0.11
CASC3-207ENST00000581849 SDIM1Q6ZPB5 146 aa14.38□□□□□ -0.11
CASC3-207ENST00000581849 EIF5A2Q9GZV4 153 aaKnown RBP14.38□□□□□ -0.11
CASC3-207ENST00000581849 AP5S1Q9NUS5 200 aa14.38□□□□□ -0.11
CASC3-207ENST00000581849 hDV102S1A0JD36 115 aa14.37□□□□□ -0.11
CASC3-207ENST00000581849 SDHAF1A6NFY7 115 aa14.37□□□□□ -0.11
CASC3-207ENST00000581849 CEBPGP53567 150 aa14.37□□□□□ -0.11
CASC3-207ENST00000581849 LINC01551Q86U37 167 aa14.37□□□□□ -0.11
CASC3-207ENST00000581849 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.36□□□□□ -0.11
CASC3-207ENST00000581849 AMMECR1LQ6DCA0 310 aa14.36□□□□□ -0.11
CASC3-207ENST00000581849 TSKUQ8WUA8 353 aa14.36□□□□□ -0.11
CASC3-207ENST00000581849 OSTCQ9NRP0 149 aa14.36□□□□□ -0.11
CASC3-207ENST00000581849 A0A1B0GUT8 65 aa14.35□□□□□ -0.11
CASC3-207ENST00000581849 ZNF25P17030 456 aaPredicted RBP14.35□□□□□ -0.11
CASC3-207ENST00000581849 CFAP161Q6P656 301 aa14.35□□□□□ -0.11
CASC3-207ENST00000581849 ZNF727A8MUV8 499 aa14.34□□□□□ -0.11
CASC3-207ENST00000581849 HIGD1CA8MV81 97 aa14.34□□□□□ -0.11
CASC3-207ENST00000581849 I3L3M4 83 aa14.34□□□□□ -0.11
CASC3-207ENST00000581849 CIRBPQ14011 172 aaKnown RBP14.34□□□□□ -0.11
CASC3-207ENST00000581849 TMEM191AQ9H0A3 160 aa14.34□□□□□ -0.11
CASC3-207ENST00000581849 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.34□□□□□ -0.11
CASC3-207ENST00000581849 SRP19P09132 144 aaKnown RBP14.33□□□□□ -0.12
CASC3-207ENST00000581849 IGHV3-64A0A075B6Q5 118 aa14.32□□□□□ -0.12
CASC3-207ENST00000581849 FGF6P10767 208 aa14.32□□□□□ -0.12
CASC3-207ENST00000581849 PMCHP20382 165 aa14.32□□□□□ -0.12
CASC3-207ENST00000581849 RPL37AP61513 92 aaKnown RBP14.32□□□□□ -0.12
CASC3-207ENST00000581849 GAGE12HA6NDE8 117 aa14.31□□□□□ -0.12
CASC3-207ENST00000581849 RNASEKQ6P5S7 137 aaKnown RBP14.31□□□□□ -0.12
CASC3-207ENST00000581849 MRAP2Q96G30 205 aa14.31□□□□□ -0.12
CASC3-207ENST00000581849 RNF185Q96GF1 192 aa14.31□□□□□ -0.12
CASC3-207ENST00000581849 ST20Q9HBF5 79 aa14.31□□□□□ -0.12
CASC3-207ENST00000581849 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.3□□□□□ -0.12
CASC3-207ENST00000581849 IGKV2-29A2NJV5 120 aaPredicted RBP14.3□□□□□ -0.12
CASC3-207ENST00000581849 OXTP01178 125 aa14.3□□□□□ -0.12
CASC3-207ENST00000581849 SLPIP03973 132 aa14.3□□□□□ -0.12
CASC3-207ENST00000581849 ESDP10768 282 aa14.3□□□□□ -0.12
CASC3-207ENST00000581849 FAM74A3Q4VXF1 159 aa14.3□□□□□ -0.12
CASC3-207ENST00000581849 C15orf56Q8N910 161 aa14.3□□□□□ -0.12
CASC3-207ENST00000581849 PANO1I0J062 215 aa14.29□□□□□ -0.12
CASC3-207ENST00000581849 OR5A1Q8NGJ0 315 aa14.29□□□□□ -0.12
CASC3-207ENST00000581849 CHCHD10Q8WYQ3 142 aaPredicted RBP14.29□□□□□ -0.12
CASC3-207ENST00000581849 BTF3L4Q96K17 158 aa14.29□□□□□ -0.12
CASC3-207ENST00000581849 IGKV3OR2-268A0A0C4DH90 116 aa14.28□□□□□ -0.12
CASC3-207ENST00000581849 TRBV27A0A0K0K1C4 114 aa14.28□□□□□ -0.12
CASC3-207ENST00000581849 V9GYV3 84 aa14.28□□□□□ -0.12
CASC3-207ENST00000581849 RAB4AP20338 218 aa14.27□□□□□ -0.13
CASC3-207ENST00000581849 POLR2KP53803 58 aaKnown RBP14.27□□□□□ -0.13
CASC3-207ENST00000581849 RIGQ13278 110 aa14.27□□□□□ -0.13
CASC3-207ENST00000581849 TMEM101Q96IK0 257 aa14.27□□□□□ -0.13
CASC3-207ENST00000581849 PKHD1L1Q86WI1 4243 aa14.26□□□□□ -0.13
CASC3-207ENST00000581849 TSHBP01222 138 aa14.26□□□□□ -0.13
CASC3-207ENST00000581849 MRPL52Q86TS9 123 aaKnown RBP14.26□□□□□ -0.13
CASC3-207ENST00000581849 ISOC2Q96AB3 205 aa14.26□□□□□ -0.13
CASC3-207ENST00000581849 LRP1Q07954 4544 aaKnown RBP14.25□□□□□ -0.13
CASC3-207ENST00000581849 GVQW2A0A096LPI5 108 aaPredicted RBP14.25□□□□□ -0.13
CASC3-207ENST00000581849 GAS8-AS1O95177 125 aa14.25□□□□□ -0.13
CASC3-207ENST00000581849 PPP1R17O96001 155 aa14.25□□□□□ -0.13
CASC3-207ENST00000581849 TMEM241Q24JQ0 296 aa14.25□□□□□ -0.13
CASC3-207ENST00000581849 TMEM242Q9NWH2 141 aa14.25□□□□□ -0.13
CASC3-207ENST00000581849 FAT3Q8TDW7 4589 aa14.24□□□□□ -0.13
CASC3-207ENST00000581849 RPS10P46783 165 aaKnown RBP14.24□□□□□ -0.13
CASC3-207ENST00000581849 AMN1Q8IY45 258 aa14.24□□□□□ -0.13
CASC3-207ENST00000581849 NUP35Q8NFH5 326 aa14.24□□□□□ -0.13
CASC3-207ENST00000581849 SPACA4Q8TDM5 124 aa14.24□□□□□ -0.13
CASC3-207ENST00000581849 NAT8BQ9UHF3 227 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms