RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SMIM17P0DL12 118 aa13.95□□□□□ -0.18
CCDC42-203ENST00000581598 FAM104BQ5XKR9 115 aa13.95□□□□□ -0.18
CCDC42-203ENST00000581598 RNF185Q96GF1 192 aa13.95□□□□□ -0.18
CCDC42-203ENST00000581598 TM2D2Q9BX73 214 aa13.95□□□□□ -0.18
CCDC42-203ENST00000581598 IGLV5-52A0A0A0MRZ9 124 aa13.94□□□□□ -0.18
CCDC42-203ENST00000581598 HLA-DQA1P01909 254 aa13.94□□□□□ -0.18
CCDC42-203ENST00000581598 MT-ND6P03923 174 aa13.94□□□□□ -0.18
CCDC42-203ENST00000581598 FAM74A4Q5TZK3 123 aa13.94□□□□□ -0.18
CCDC42-203ENST00000581598 AMN1Q8IY45 258 aa13.94□□□□□ -0.18
CCDC42-203ENST00000581598 Q8N814 137 aa13.94□□□□□ -0.18
CCDC42-203ENST00000581598 Q9UF83 564 aa13.94□□□□□ -0.18
CCDC42-203ENST00000581598 TMEM70Q9BUB7 260 aa13.93□□□□□ -0.18
CCDC42-203ENST00000581598 FAT1Q14517 4588 aa13.93□□□□□ -0.18
CCDC42-203ENST00000581598 TRAV8-3A0A0A6YYJ7 113 aa13.92□□□□□ -0.18
CCDC42-203ENST00000581598 RAB4AP20338 218 aa13.92□□□□□ -0.18
CCDC42-203ENST00000581598 RAB4BP61018 213 aa13.92□□□□□ -0.18
CCDC42-203ENST00000581598 FRZBQ92765 325 aa13.92□□□□□ -0.18
CCDC42-203ENST00000581598 MGPP08493 103 aa13.91□□□□□ -0.18
CCDC42-203ENST00000581598 RAB5AP20339 215 aa13.91□□□□□ -0.18
CCDC42-203ENST00000581598 ZNF56Q15929 161 aa13.9□□□□□ -0.18
CCDC42-203ENST00000581598 MRPL51Q4U2R6 128 aaKnown RBP13.9□□□□□ -0.18
CCDC42-203ENST00000581598 Q8N3U1 123 aa13.9□□□□□ -0.18
CCDC42-203ENST00000581598 TRBV10-1A0A0K0K1A3 114 aa13.89□□□□□ -0.19
CCDC42-203ENST00000581598 Q5VSD8 79 aa13.89□□□□□ -0.19
CCDC42-203ENST00000581598 SUMO4Q6EEV6 95 aa13.89□□□□□ -0.19
CCDC42-203ENST00000581598 MRAP2Q96G30 205 aa13.89□□□□□ -0.19
CCDC42-203ENST00000581598 DAZ4Q86SG3 579 aaKnown RBP13.88□□□□□ -0.19
CCDC42-203ENST00000581598 MRPL18Q9H0U6 180 aaKnown RBP13.88□□□□□ -0.19
CCDC42-203ENST00000581598 DAZ3Q9NR90 486 aaKnown RBP13.88□□□□□ -0.19
CCDC42-203ENST00000581598 TRAPPC1Q9Y5R8 145 aa13.88□□□□□ -0.19
CCDC42-203ENST00000581598 COX11Q9Y6N1 276 aa13.88□□□□□ -0.19
CCDC42-203ENST00000581598 F5H697 171 aa13.87□□□□□ -0.19
CCDC42-203ENST00000581598 M0QY20 66 aa13.87□□□□□ -0.19
CCDC42-203ENST00000581598 APCSP02743 223 aa13.87□□□□□ -0.19
CCDC42-203ENST00000581598 NIT1Q86X76 327 aa13.87□□□□□ -0.19
CCDC42-203ENST00000581598 TRAV26-2A0A0B4J265 109 aa13.86□□□□□ -0.19
CCDC42-203ENST00000581598 PPBPP02775 128 aa13.86□□□□□ -0.19
CCDC42-203ENST00000581598 INAFM2P0DMQ5 153 aa13.86□□□□□ -0.19
CCDC42-203ENST00000581598 RPS10P46783 165 aaKnown RBP13.86□□□□□ -0.19
CCDC42-203ENST00000581598 CHCHD7Q9BUK0 85 aa13.86□□□□□ -0.19
CCDC42-203ENST00000581598 H7C1H1 209 aa13.85□□□□□ -0.19
CCDC42-203ENST00000581598 RPL36AP83881 106 aaKnown RBP13.85□□□□□ -0.19
CCDC42-203ENST00000581598 WFDC2Q14508 124 aa13.85□□□□□ -0.19
CCDC42-203ENST00000581598 RPL36ALQ969Q0 106 aaKnown RBP13.85□□□□□ -0.19
CCDC42-203ENST00000581598 TRBV7-3A0A075B6L6 115 aa13.84□□□□□ -0.19
CCDC42-203ENST00000581598 D6R8Y8 96 aa13.84□□□□□ -0.19
CCDC42-203ENST00000581598 PHOX2AO14813 284 aa13.84□□□□□ -0.19
CCDC42-203ENST00000581598 GAS8-AS1O95177 125 aa13.84□□□□□ -0.19
CCDC42-203ENST00000581598 CKS2P33552 79 aa13.84□□□□□ -0.19
CCDC42-203ENST00000581598 UBE2D3P61077 147 aa13.84□□□□□ -0.19
CCDC42-203ENST00000581598 UBE2D2P62837 147 aa13.84□□□□□ -0.19
CCDC42-203ENST00000581598 FABP9Q0Z7S8 132 aa13.84□□□□□ -0.19
CCDC42-203ENST00000581598 RMI2Q96E14 147 aa13.84□□□□□ -0.19
CCDC42-203ENST00000581598 SMKR1H3BMG3 65 aa13.83□□□□□ -0.2
CCDC42-203ENST00000581598 NCR2O95944 276 aa13.83□□□□□ -0.2
CCDC42-203ENST00000581598 KIAA1644Q3SXP7 199 aa13.83□□□□□ -0.2
CCDC42-203ENST00000581598 ORMDL3Q8N138 153 aa13.83□□□□□ -0.2
CCDC42-203ENST00000581598 NRACQ8N912 160 aa13.83□□□□□ -0.2
CCDC42-203ENST00000581598 SMR3BP02814 79 aaPredicted RBP13.82□□□□□ -0.2
CCDC42-203ENST00000581598 FAM229AH3BQW9 127 aa13.81□□□□□ -0.2
CCDC42-203ENST00000581598 PPP1R17O96001 155 aa13.81□□□□□ -0.2
CCDC42-203ENST00000581598 TRGC2P03986 189 aa13.81□□□□□ -0.2
CCDC42-203ENST00000581598 NEXN-AS1Q8NBZ9 246 aa13.81□□□□□ -0.2
CCDC42-203ENST00000581598 RPL39LQ96EH5 51 aaKnown RBP13.81□□□□□ -0.2
CCDC42-203ENST00000581598 NIT2Q9NQR4 276 aa13.81□□□□□ -0.2
CCDC42-203ENST00000581598 LAMTOR2Q9Y2Q5 125 aa13.81□□□□□ -0.2
CCDC42-203ENST00000581598 TRBV6-5A0A0K0K1A5 114 aa13.8□□□□□ -0.2
CCDC42-203ENST00000581598 Q6ZSA8 131 aa13.8□□□□□ -0.2
CCDC42-203ENST00000581598 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.8□□□□□ -0.2
CCDC42-203ENST00000581598 DNAJC30Q96LL9 226 aa13.8□□□□□ -0.2
CCDC42-203ENST00000581598 PRELID3AQ96N28 172 aa13.8□□□□□ -0.2
CCDC42-203ENST00000581598 ALKBH7Q9BT30 221 aaPredicted RBP13.8□□□□□ -0.2
CCDC42-203ENST00000581598 FAM30AQ9NZY2 134 aa13.8□□□□□ -0.2
CCDC42-203ENST00000581598 A0A087WX48 190 aa13.79□□□□□ -0.2
CCDC42-203ENST00000581598 NPYP01303 97 aa13.79□□□□□ -0.2
CCDC42-203ENST00000581598 KLK12Q9UKR0 248 aa13.79□□□□□ -0.2
CCDC42-203ENST00000581598 VPS13BQ7Z7G8 4022 aa13.78□□□□□ -0.2
CCDC42-203ENST00000581598 DNAH8Q96JB1 4490 aa13.78□□□□□ -0.2
CCDC42-203ENST00000581598 TNFRSF6BO95407 300 aa13.78□□□□□ -0.2
CCDC42-203ENST00000581598 HAMPP81172 84 aa13.78□□□□□ -0.2
CCDC42-203ENST00000581598 TRBV6-8A0A0A6YYG3 113 aa13.77□□□□□ -0.21
CCDC42-203ENST00000581598 LECT2O14960 151 aa13.77□□□□□ -0.21
CCDC42-203ENST00000581598 Q8N976 141 aa13.77□□□□□ -0.21
CCDC42-203ENST00000581598 BAALCQ8WXS3 180 aa13.77□□□□□ -0.21
CCDC42-203ENST00000581598 IGKV2D-24A0A075B6R9 120 aa13.76□□□□□ -0.21
CCDC42-203ENST00000581598 PRSS47A8MTI9 375 aa13.76□□□□□ -0.21
CCDC42-203ENST00000581598 RPL32P62910 135 aaKnown RBP13.76□□□□□ -0.21
CCDC42-203ENST00000581598 Q0VG73 95 aa13.76□□□□□ -0.21
CCDC42-203ENST00000581598 UBE2WQ96B02 151 aa13.76□□□□□ -0.21
CCDC42-203ENST00000581598 C20orf78Q9BR46 151 aa13.76□□□□□ -0.21
CCDC42-203ENST00000581598 DMBT1Q9UGM3 2413 aaPredicted RBP13.75□□□□□ -0.21
CCDC42-203ENST00000581598 POLR2KP53803 58 aaKnown RBP13.75□□□□□ -0.21
CCDC42-203ENST00000581598 SUMO2P61956 95 aaKnown RBP13.75□□□□□ -0.21
CCDC42-203ENST00000581598 ST20Q9HBF5 79 aa13.75□□□□□ -0.21
CCDC42-203ENST00000581598 MYCBP2O75592 4640 aa13.75□□□□□ -0.21
CCDC42-203ENST00000581598 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.74□□□□□ -0.21
CCDC42-203ENST00000581598 FLG2Q5D862 2391 aaPredicted RBP13.73□□□□□ -0.21
CCDC42-203ENST00000581598 SDHAF1A6NFY7 115 aa13.73□□□□□ -0.21
CCDC42-203ENST00000581598 PKIAP61925 76 aa13.73□□□□□ -0.21
CCDC42-203ENST00000581598 TMEM97Q5BJF2 176 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms