RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CHCHD1Q96BP2 118 aaKnown RBP1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 AMELYQ99218 206 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 CACYBPQ9HB71 228 aaKnown RBP1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 LRTM1Q9HBL6 345 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 NUBP2Q9Y5Y2 271 aa1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 DYNC2H1Q8NCM8 4307 aaKnown RBP1.05□□□□□ -2.24
SMCHD1-205ENST00000581383 SVEP1Q4LDE5 3571 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 PLECQ15149 4684 aaKnown RBP1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 UNC13CQ8NB66 2214 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 MXRA5Q9NR99 2828 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 TRAV10A0A0B4J240 114 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 M0R233 179 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 KPNA4O00629 521 aaPredicted RBP1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 HIST1H2BKO60814 126 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 HMGN2P05204 90 aaKnown RBP1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 HIST1H2BJP06899 126 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 RPL7P18124 248 aaKnown RBP1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 S100A11P31949 105 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 C10orf111Q8N326 155 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 CCDC32Q9BV29 185 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 GGACTQ9BVM4 153 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 OR2H1Q9GZK4 316 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 TAF9BQ9HBM6 251 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 DYNLRB1Q9NP97 96 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 ORMDL1Q9P0S3 153 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 DNAH9Q9NYC9 4486 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 KIAA1109Q2LD37 5005 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 PKDREJQ9NTG1 2253 aa1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.04□□□□□ -2.241e-8■□□□□ 9.5
SMCHD1-205ENST00000581383 SONP18583 2426 aaKnown RBP1.04□□□□□ -2.24
SMCHD1-205ENST00000581383 TGP01266 2768 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 MAP1AP78559 2803 aaPredicted RBP1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 ZANQ9Y493 2812 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 RYR1P21817 5038 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 SPTBP11277 2137 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 AKAP6Q13023 2319 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 MGAM2Q2M2H8 2515 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 IGLV3-32A0A0A0MS00 114 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 TRAV5A0A0B4J249 113 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 MRPL33O75394 65 aaKnown RBP1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 CST7O76096 145 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 TFF1P04155 84 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 OR10J4P0C629 311 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 FABP2P12104 132 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 S100GP29377 79 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 RPL35P42766 123 aaKnown RBP1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 EFNA4P52798 201 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 CDK6Q00534 326 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 SAMD13Q5VXD3 122 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 TMEM14EPQ6UXP3 125 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 LINC00322Q6ZN03 302 aaPredicted RBP1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 ZNF833PQ6ZTB9 187 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 PHF5AQ7RTV0 110 aaKnown RBP1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 AKAP14Q86UN6 197 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 MMGT1Q8N4V1 131 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 Q8TAT8 98 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 THEM6Q8WUY1 208 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 RAB37Q96AX2 223 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 LINC00052Q96N35 136 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 WFDC6Q9BQY6 131 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 CBLN4Q9NTU7 201 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 TMEM14CQ9P0S9 112 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 LAMTOR3Q9UHA4 124 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 NAT8BQ9UHF3 227 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 DNAJC15Q9Y5T4 150 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 TRRAPQ9Y4A5 3859 aa1.03□□□□□ -2.24
SMCHD1-205ENST00000581383 CNTRLQ7Z7A1 2325 aa1.03□□□□□ -2.25
SMCHD1-205ENST00000581383 STARD9Q9P2P6 4700 aa1.03□□□□□ -2.25
SMCHD1-205ENST00000581383 MUC2Q02817 5179 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 IGHV1-58A0A0C4DH39 117 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 A0A1B0GWA3 101 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 PRORSD1PA6NEY8 169 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 OR2T8A6NH00 312 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 CPSF4LA6NMK7 179 aaKnown RBP1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 E7EUB6 86 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 C17orf112F2Z3M2 114 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 HMGN4O00479 90 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 TPST1O60507 370 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 PFDN1O60925 122 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 MT-ND6P03923 174 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 IFNA4P05014 189 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 BCL2P10415 239 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 RAB5CP51148 216 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 POLR2HP52434 150 aaKnown RBP1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 UBA52P62987 128 aaKnown RBP1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 ABCA4P78363 2273 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 CCL8P80075 99 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 PSG9Q00887 426 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 WHAMMP3Q1A5X7 153 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 TMEM128Q5BJH2 165 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 ZGRF1Q86YA3 2104 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 OR5AS1Q8N127 324 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 LRRC18Q8N456 261 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 DNAH3Q8TD57 4116 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 MED12Q93074 2177 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 MUCL1Q96DR8 90 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 SDF2Q99470 211 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 DPY30Q9C005 99 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms