RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 TRAV26-2A0A0B4J265 109 aa6.87□□□□□ -1.31
SUPT4H1-204ENST00000580947 A0A1B0GUV1 79 aa6.87□□□□□ -1.31
SUPT4H1-204ENST00000580947 USP17L23D6RBM5 183 aa6.87□□□□□ -1.31
SUPT4H1-204ENST00000580947 SRP19P09132 144 aaKnown RBP6.87□□□□□ -1.31
SUPT4H1-204ENST00000580947 CLPSL2Q6UWE3 100 aa6.87□□□□□ -1.31
SUPT4H1-204ENST00000580947 SCXQ7RTU7 201 aa6.87□□□□□ -1.31
SUPT4H1-204ENST00000580947 DEFB104AQ8WTQ1 72 aa6.87□□□□□ -1.31
SUPT4H1-204ENST00000580947 RPL39LQ96EH5 51 aaKnown RBP6.87□□□□□ -1.31
SUPT4H1-204ENST00000580947 TMEM243Q9BU79 118 aa6.87□□□□□ -1.31
SUPT4H1-204ENST00000580947 A8MWL6 223 aa6.86□□□□□ -1.31
SUPT4H1-204ENST00000580947 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
SUPT4H1-204ENST00000580947 GATCO43716 136 aaKnown RBP6.86□□□□□ -1.31
SUPT4H1-204ENST00000580947 PRSS1P07477 247 aa6.86□□□□□ -1.31
SUPT4H1-204ENST00000580947 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
SUPT4H1-204ENST00000580947 REG3AQ06141 175 aa6.86□□□□□ -1.31
SUPT4H1-204ENST00000580947 SMIM7Q9BQ49 75 aa6.86□□□□□ -1.31
SUPT4H1-204ENST00000580947 GAS8-AS1O95177 125 aa6.85□□□□□ -1.31
SUPT4H1-204ENST00000580947 HLA-DQA1P01909 254 aa6.85□□□□□ -1.31
SUPT4H1-204ENST00000580947 C14orf177Q52M58 125 aa6.85□□□□□ -1.31
SUPT4H1-204ENST00000580947 CHAC1Q9BUX1 264 aa6.85□□□□□ -1.31
SUPT4H1-204ENST00000580947 IGLV10-54A0A075B6I4 117 aa6.84□□□□□ -1.31
SUPT4H1-204ENST00000580947 C9JQL5 133 aa6.84□□□□□ -1.31
SUPT4H1-204ENST00000580947 CEBPGP53567 150 aa6.84□□□□□ -1.31
SUPT4H1-204ENST00000580947 COTL1Q14019 142 aa6.84□□□□□ -1.31
SUPT4H1-204ENST00000580947 LINC00528Q8N1L1 170 aa6.84□□□□□ -1.31
SUPT4H1-204ENST00000580947 CIRBP-AS1Q8TBR5 109 aa6.84□□□□□ -1.31
SUPT4H1-204ENST00000580947 TSKUQ8WUA8 353 aa6.84□□□□□ -1.31
SUPT4H1-204ENST00000580947 EIF5A2Q9GZV4 153 aaKnown RBP6.84□□□□□ -1.31
SUPT4H1-204ENST00000580947 OSTCQ9NRP0 149 aa6.84□□□□□ -1.31
SUPT4H1-204ENST00000580947 TRAV8-4A0A0B4J246 113 aa6.83□□□□□ -1.32
SUPT4H1-204ENST00000580947 TRBV6-5A0A0K0K1A5 114 aa6.83□□□□□ -1.32
SUPT4H1-204ENST00000580947 FAM231BA6NCW3 169 aa6.83□□□□□ -1.32
SUPT4H1-204ENST00000580947 ZNF727A8MUV8 499 aa6.83□□□□□ -1.32
SUPT4H1-204ENST00000580947 HIGD1CA8MV81 97 aa6.83□□□□□ -1.32
SUPT4H1-204ENST00000580947 AMTP48728 403 aa6.83□□□□□ -1.32
SUPT4H1-204ENST00000580947 C9orf163Q8N9P6 203 aa6.83□□□□□ -1.32
SUPT4H1-204ENST00000580947 RNF185Q96GF1 192 aa6.83□□□□□ -1.32
SUPT4H1-204ENST00000580947 V9GYV3 84 aa6.83□□□□□ -1.32
SUPT4H1-204ENST00000580947 A0A1B0GUT8 65 aa6.82□□□□□ -1.32
SUPT4H1-204ENST00000580947 SDHAF1A6NFY7 115 aa6.82□□□□□ -1.32
SUPT4H1-204ENST00000580947 NCR2O95944 276 aa6.82□□□□□ -1.32
SUPT4H1-204ENST00000580947 DGAT2L7PQ6IED9 249 aa6.82□□□□□ -1.32
SUPT4H1-204ENST00000580947 TEX261Q6UWH6 196 aa6.82□□□□□ -1.32
SUPT4H1-204ENST00000580947 ISOC2Q96AB3 205 aa6.82□□□□□ -1.32
SUPT4H1-204ENST00000580947 TMEM191AQ9H0A3 160 aa6.82□□□□□ -1.32
SUPT4H1-204ENST00000580947 PANO1I0J062 215 aa6.81□□□□□ -1.32
SUPT4H1-204ENST00000580947 SLPIP03973 132 aa6.81□□□□□ -1.32
SUPT4H1-204ENST00000580947 ESDP10768 282 aa6.81□□□□□ -1.32
SUPT4H1-204ENST00000580947 RPS10P46783 165 aaKnown RBP6.81□□□□□ -1.32
SUPT4H1-204ENST00000580947 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
SUPT4H1-204ENST00000580947 RPL23P62829 140 aaKnown RBP6.81□□□□□ -1.32
SUPT4H1-204ENST00000580947 SRSF3P84103 164 aaKnown RBP6.81□□□□□ -1.32
SUPT4H1-204ENST00000580947 SMIM15Q7Z3B0 74 aa6.81□□□□□ -1.32
SUPT4H1-204ENST00000580947 H7C423 109 aa6.8□□□□□ -1.32
SUPT4H1-204ENST00000580947 TSHBP01222 138 aa6.8□□□□□ -1.32
SUPT4H1-204ENST00000580947 RAB4AP20338 218 aa6.8□□□□□ -1.32
SUPT4H1-204ENST00000580947 POLR2KP53803 58 aaKnown RBP6.8□□□□□ -1.32
SUPT4H1-204ENST00000580947 SDIM1Q6ZPB5 146 aa6.8□□□□□ -1.32
SUPT4H1-204ENST00000580947 C15orf56Q8N910 161 aa6.8□□□□□ -1.32
SUPT4H1-204ENST00000580947 CLRN3Q8NCR9 226 aa6.8□□□□□ -1.32
SUPT4H1-204ENST00000580947 NUP35Q8NFH5 326 aa6.8□□□□□ -1.32
SUPT4H1-204ENST00000580947 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.8□□□□□ -1.32
SUPT4H1-204ENST00000580947 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.79□□□□□ -1.32
SUPT4H1-204ENST00000580947 TRBV27A0A0K0K1C4 114 aa6.79□□□□□ -1.32
SUPT4H1-204ENST00000580947 IGKV2-29A2NJV5 120 aaPredicted RBP6.79□□□□□ -1.32
SUPT4H1-204ENST00000580947 I3L3M4 83 aa6.79□□□□□ -1.32
SUPT4H1-204ENST00000580947 UBE2L6O14933 153 aa6.79□□□□□ -1.32
SUPT4H1-204ENST00000580947 APCSP02743 223 aa6.79□□□□□ -1.32
SUPT4H1-204ENST00000580947 PLA2G1BP04054 148 aaKnown RBP6.79□□□□□ -1.32
SUPT4H1-204ENST00000580947 FGF6P10767 208 aa6.79□□□□□ -1.32
SUPT4H1-204ENST00000580947 CIRBPQ14011 172 aaKnown RBP6.79□□□□□ -1.32
SUPT4H1-204ENST00000580947 TMEM241Q24JQ0 296 aa6.79□□□□□ -1.32
SUPT4H1-204ENST00000580947 FAM74A3Q4VXF1 159 aa6.79□□□□□ -1.32
SUPT4H1-204ENST00000580947 AMN1Q8IY45 258 aa6.79□□□□□ -1.32
SUPT4H1-204ENST00000580947 NRACQ8N912 160 aa6.78□□□□□ -1.32
SUPT4H1-204ENST00000580947 BORCS7Q96B45 105 aa6.78□□□□□ -1.32
SUPT4H1-204ENST00000580947 MRAP2Q96G30 205 aa6.78□□□□□ -1.32
SUPT4H1-204ENST00000580947 SMIM27A0A1W2PRY6 76 aa6.77□□□□□ -1.33
SUPT4H1-204ENST00000580947 hDV102S1A0JD36 115 aa6.77□□□□□ -1.33
SUPT4H1-204ENST00000580947 GAGE12HA6NDE8 117 aa6.77□□□□□ -1.33
SUPT4H1-204ENST00000580947 SMKR1H3BMG3 65 aa6.77□□□□□ -1.33
SUPT4H1-204ENST00000580947 ZNF25P17030 456 aaPredicted RBP6.77□□□□□ -1.33
SUPT4H1-204ENST00000580947 CHCHD10Q8WYQ3 142 aaPredicted RBP6.77□□□□□ -1.33
SUPT4H1-204ENST00000580947 SMDT1Q9H4I9 107 aa6.77□□□□□ -1.33
SUPT4H1-204ENST00000580947 ST20Q9HBF5 79 aa6.77□□□□□ -1.33
SUPT4H1-204ENST00000580947 TMEM242Q9NWH2 141 aa6.77□□□□□ -1.33
SUPT4H1-204ENST00000580947 NAT8Q9UHE5 227 aa6.77□□□□□ -1.33
SUPT4H1-204ENST00000580947 HMCN2Q8NDA2 5059 aa6.77□□□□□ -1.33
SUPT4H1-204ENST00000580947 PMCHP20382 165 aa6.76□□□□□ -1.33
SUPT4H1-204ENST00000580947 FOXI1Q12951 378 aa6.76□□□□□ -1.33
SUPT4H1-204ENST00000580947 RIGQ13278 110 aa6.76□□□□□ -1.33
SUPT4H1-204ENST00000580947 ADIRFQ15847 76 aa6.76□□□□□ -1.33
SUPT4H1-204ENST00000580947 AMMECR1LQ6DCA0 310 aa6.76□□□□□ -1.33
SUPT4H1-204ENST00000580947 MRPL52Q86TS9 123 aaKnown RBP6.76□□□□□ -1.33
SUPT4H1-204ENST00000580947 NAT8BQ9UHF3 227 aa6.76□□□□□ -1.33
SUPT4H1-204ENST00000580947 GVQW2A0A096LPI5 108 aaPredicted RBP6.75□□□□□ -1.33
SUPT4H1-204ENST00000580947 IGKV3OR2-268A0A0C4DH90 116 aa6.75□□□□□ -1.33
SUPT4H1-204ENST00000580947 KRTAP29-1A8MX34 341 aaPredicted RBP6.75□□□□□ -1.33
SUPT4H1-204ENST00000580947 PEA15Q15121 130 aa6.75□□□□□ -1.33
SUPT4H1-204ENST00000580947 FAM104BQ5XKR9 115 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms