RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 IGHV3-30-5P0DP03 117 aa13.89□□□□□ -0.19
SNX11-207ENST00000580875 RAB5BP61020 215 aa13.89□□□□□ -0.19
SNX11-207ENST00000580875 LELP1Q5T871 98 aa13.89□□□□□ -0.19
SNX11-207ENST00000580875 VPS13BQ7Z7G8 4022 aa13.88□□□□□ -0.19
SNX11-207ENST00000580875 IGHV3-73A0A0B4J1V6 119 aa13.88□□□□□ -0.19
SNX11-207ENST00000580875 DMRTA1Q5VZB9 504 aa13.88□□□□□ -0.19
SNX11-207ENST00000580875 GTSF1LQ9H1H1 148 aa13.88□□□□□ -0.19
SNX11-207ENST00000580875 TMA7Q9Y2S6 64 aaKnown RBP13.88□□□□□ -0.19
SNX11-207ENST00000580875 FLG2Q5D862 2391 aaPredicted RBP13.88□□□□□ -0.19
SNX11-207ENST00000580875 LAGE3Q14657 143 aa13.87□□□□□ -0.19
SNX11-207ENST00000580875 PTH2Q96A98 100 aa13.87□□□□□ -0.19
SNX11-207ENST00000580875 PIK3CD-AS1Q5SR53 167 aa13.86□□□□□ -0.19
SNX11-207ENST00000580875 FAM104BQ5XKR9 115 aa13.86□□□□□ -0.19
SNX11-207ENST00000580875 ATP6V0E2Q8NHE4 81 aa13.86□□□□□ -0.19
SNX11-207ENST00000580875 PHOX2AO14813 284 aa13.85□□□□□ -0.19
SNX11-207ENST00000580875 SMIM17P0DL12 118 aa13.85□□□□□ -0.19
SNX11-207ENST00000580875 AMN1Q8IY45 258 aa13.85□□□□□ -0.19
SNX11-207ENST00000580875 TM2D2Q9BX73 214 aa13.85□□□□□ -0.19
SNX11-207ENST00000580875 DPH3P1Q9H4G8 78 aa13.85□□□□□ -0.19
SNX11-207ENST00000580875 FAM30AQ9NZY2 134 aa13.85□□□□□ -0.19
SNX11-207ENST00000580875 KIAA1644Q3SXP7 199 aa13.83□□□□□ -0.2
SNX11-207ENST00000580875 A8MWV9 139 aa13.82□□□□□ -0.2
SNX11-207ENST00000580875 C14orf178Q8N769 122 aaPredicted RBP13.82□□□□□ -0.2
SNX11-207ENST00000580875 MGPP08493 103 aa13.81□□□□□ -0.2
SNX11-207ENST00000580875 MRPL51Q4U2R6 128 aaKnown RBP13.81□□□□□ -0.2
SNX11-207ENST00000580875 RNF185Q96GF1 192 aa13.81□□□□□ -0.2
SNX11-207ENST00000580875 HIST1H2BKO60814 126 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 HIST1H2BJP06899 126 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 RAB4AP20338 218 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 HIST1H2BOP23527 126 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 HIST1H2BBP33778 126 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 HIST1H2BDP58876 126 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 HIST1H2BCP62807 126 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 HIST2H2BEQ16778 126 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.8□□□□□ -0.2
SNX11-207ENST00000580875 ZFP2Q6ZN57 461 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 Q8N3U1 123 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 HIST1H2BHQ93079 126 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 HIST1H2BNQ99877 126 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 HIST1H2BMQ99879 126 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 JPT2Q9H910 190 aa13.8□□□□□ -0.2
SNX11-207ENST00000580875 A0A087WWL8 130 aa13.79□□□□□ -0.2
SNX11-207ENST00000580875 TRAV8-3A0A0A6YYJ7 113 aa13.79□□□□□ -0.2
SNX11-207ENST00000580875 LINC00694P0DN24 101 aa13.79□□□□□ -0.2
SNX11-207ENST00000580875 WFDC2Q14508 124 aa13.79□□□□□ -0.2
SNX11-207ENST00000580875 FAM74A4Q5TZK3 123 aa13.79□□□□□ -0.2
SNX11-207ENST00000580875 KIF25-AS1Q9Y6Z4 181 aa13.79□□□□□ -0.2
SNX11-207ENST00000580875 GAGE12JA6NER3 117 aa13.78□□□□□ -0.2
SNX11-207ENST00000580875 J3QL48 77 aa13.78□□□□□ -0.2
SNX11-207ENST00000580875 PPBPP02775 128 aa13.78□□□□□ -0.2
SNX11-207ENST00000580875 PLA2G1BP04054 148 aaKnown RBP13.78□□□□□ -0.2
SNX11-207ENST00000580875 CKS2P33552 79 aa13.78□□□□□ -0.2
SNX11-207ENST00000580875 GAGE1Q13065 139 aa13.78□□□□□ -0.2
SNX11-207ENST00000580875 GAGE4Q13068 117 aa13.78□□□□□ -0.2
SNX11-207ENST00000580875 GAGE5Q13069 117 aa13.78□□□□□ -0.2
SNX11-207ENST00000580875 GAGE13Q4V321 117 aa13.78□□□□□ -0.2
SNX11-207ENST00000580875 Q6ZSA8 131 aa13.78□□□□□ -0.2
SNX11-207ENST00000580875 ORMDL3Q8N138 153 aa13.78□□□□□ -0.2
SNX11-207ENST00000580875 MRAP2Q96G30 205 aa13.78□□□□□ -0.2
SNX11-207ENST00000580875 D6R8Y8 96 aa13.77□□□□□ -0.21
SNX11-207ENST00000580875 RHODO00212 210 aa13.77□□□□□ -0.21
SNX11-207ENST00000580875 ALKBH7Q9BT30 221 aaPredicted RBP13.77□□□□□ -0.21
SNX11-207ENST00000580875 LECT2O14960 151 aa13.76□□□□□ -0.21
SNX11-207ENST00000580875 NCR2O95944 276 aa13.76□□□□□ -0.21
SNX11-207ENST00000580875 ZNF56Q15929 161 aa13.76□□□□□ -0.21
SNX11-207ENST00000580875 DAZ4Q86SG3 579 aaKnown RBP13.76□□□□□ -0.21
SNX11-207ENST00000580875 PRELID3AQ96N28 172 aa13.76□□□□□ -0.21
SNX11-207ENST00000580875 SAMD10Q9BYL1 202 aa13.76□□□□□ -0.21
SNX11-207ENST00000580875 DAZ3Q9NR90 486 aaKnown RBP13.76□□□□□ -0.21
SNX11-207ENST00000580875 SMKR1H3BMG3 65 aa13.75□□□□□ -0.21
SNX11-207ENST00000580875 S100A6P06703 90 aa13.75□□□□□ -0.21
SNX11-207ENST00000580875 COX11Q9Y6N1 276 aa13.75□□□□□ -0.21
SNX11-207ENST00000580875 F5H697 171 aa13.74□□□□□ -0.21
SNX11-207ENST00000580875 LINC00528Q8N1L1 170 aa13.74□□□□□ -0.21
SNX11-207ENST00000580875 LAMTOR2Q9Y2Q5 125 aa13.74□□□□□ -0.21
SNX11-207ENST00000580875 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.73□□□□□ -0.21
SNX11-207ENST00000580875 TRAV26-2A0A0B4J265 109 aa13.73□□□□□ -0.21
SNX11-207ENST00000580875 NDUFA6P56556 154 aa13.73□□□□□ -0.21
SNX11-207ENST00000580875 SUMO4Q6EEV6 95 aa13.73□□□□□ -0.21
SNX11-207ENST00000580875 UFSP1Q6NVU6 142 aa13.73□□□□□ -0.21
SNX11-207ENST00000580875 Q9UF83 564 aa13.73□□□□□ -0.21
SNX11-207ENST00000580875 Q0VG73 95 aa13.72□□□□□ -0.21
SNX11-207ENST00000580875 C18orf32Q8TCD1 76 aa13.72□□□□□ -0.21
SNX11-207ENST00000580875 NPYP01303 97 aa13.71□□□□□ -0.21
SNX11-207ENST00000580875 BAGE3Q86Y29 109 aa13.71□□□□□ -0.21
SNX11-207ENST00000580875 BAALCQ8WXS3 180 aa13.71□□□□□ -0.21
SNX11-207ENST00000580875 RMI2Q96E14 147 aa13.71□□□□□ -0.21
SNX11-207ENST00000580875 DNAH8Q96JB1 4490 aa13.71□□□□□ -0.22
SNX11-207ENST00000580875 H7C1H1 209 aa13.7□□□□□ -0.22
SNX11-207ENST00000580875 PPP1R17O96001 155 aa13.7□□□□□ -0.22
SNX11-207ENST00000580875 IQCJQ1A5X6 159 aa13.7□□□□□ -0.22
SNX11-207ENST00000580875 MAP1LC3AQ9H492 121 aa13.7□□□□□ -0.22
SNX11-207ENST00000580875 TNFRSF6BO95407 300 aa13.69□□□□□ -0.22
SNX11-207ENST00000580875 NRACQ8N912 160 aa13.69□□□□□ -0.22
SNX11-207ENST00000580875 Q8N976 141 aa13.69□□□□□ -0.22
SNX11-207ENST00000580875 DEFB104AQ8WTQ1 72 aa13.69□□□□□ -0.22
SNX11-207ENST00000580875 KRTAP29-1A8MX34 341 aaPredicted RBP13.68□□□□□ -0.22
SNX11-207ENST00000580875 GAS8-AS1O95177 125 aa13.68□□□□□ -0.22
SNX11-207ENST00000580875 COA6Q5JTJ3 125 aaKnown RBP13.68□□□□□ -0.22
SNX11-207ENST00000580875 NIT1Q86X76 327 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms