RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 SCO2A0A1W2PP80 73 aa11.74□□□□□ -0.53
NDEL1-209ENST00000580738 LINC00526Q96FQ7 95 aa11.74□□□□□ -0.53
NDEL1-209ENST00000580738 TPPP3Q9BW30 176 aa11.74□□□□□ -0.53
NDEL1-209ENST00000580738 FAM231BA6NCW3 169 aa11.73□□□□□ -0.53
NDEL1-209ENST00000580738 S100A9P06702 114 aaKnown RBP11.73□□□□□ -0.53
NDEL1-209ENST00000580738 NIT2Q9NQR4 276 aa11.73□□□□□ -0.53
NDEL1-209ENST00000580738 FOXI1Q12951 378 aa11.72□□□□□ -0.53
NDEL1-209ENST00000580738 COTL1Q14019 142 aa11.72□□□□□ -0.53
NDEL1-209ENST00000580738 IGLC6P0CF74 106 aa11.71□□□□□ -0.53
NDEL1-209ENST00000580738 DEFA1P59665 94 aa11.71□□□□□ -0.53
NDEL1-209ENST00000580738 FER1L6-AS1Q8NA97 138 aa11.7□□□□□ -0.54
NDEL1-209ENST00000580738 FXYD6-FXYD2A0A087WZ82 144 aa11.69□□□□□ -0.54
NDEL1-209ENST00000580738 CARD19Q96LW7 228 aa11.69□□□□□ -0.54
NDEL1-209ENST00000580738 AMMECR1LQ6DCA0 310 aa11.68□□□□□ -0.54
NDEL1-209ENST00000580738 TMUB2Q71RG4 321 aa11.68□□□□□ -0.54
NDEL1-209ENST00000580738 PRR26Q8N8Z3 221 aa11.68□□□□□ -0.54
NDEL1-209ENST00000580738 A0A1B0GV50 99 aa11.67□□□□□ -0.54
NDEL1-209ENST00000580738 XCL1P47992 114 aa11.67□□□□□ -0.54
NDEL1-209ENST00000580738 CACNG7P62955 275 aa11.67□□□□□ -0.54
NDEL1-209ENST00000580738 ZNF664Q8N3J9 261 aa11.67□□□□□ -0.54
NDEL1-209ENST00000580738 MED28Q9H204 178 aa11.67□□□□□ -0.54
NDEL1-209ENST00000580738 PSORS1C2Q9UIG4 136 aa11.67□□□□□ -0.54
NDEL1-209ENST00000580738 PKIGQ9Y2B9 76 aa11.67□□□□□ -0.54
NDEL1-209ENST00000580738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.66□□□□□ -0.54
NDEL1-209ENST00000580738 A0A1W2PNN7 141 aa11.66□□□□□ -0.54
NDEL1-209ENST00000580738 IGKV2-29A2NJV5 120 aaPredicted RBP11.66□□□□□ -0.54
NDEL1-209ENST00000580738 PTTG1IPP53801 180 aa11.66□□□□□ -0.54
NDEL1-209ENST00000580738 RNASEKQ6P5S7 137 aaKnown RBP11.66□□□□□ -0.54
NDEL1-209ENST00000580738 OR2D3Q8NGH3 330 aa11.66□□□□□ -0.54
NDEL1-209ENST00000580738 NTF3P20783 257 aa11.65□□□□□ -0.54
NDEL1-209ENST00000580738 Q6ZNX1 250 aa11.65□□□□□ -0.54
NDEL1-209ENST00000580738 SFT2D1Q8WV19 159 aa11.65□□□□□ -0.54
NDEL1-209ENST00000580738 CYTL1Q9NRR1 136 aa11.65□□□□□ -0.54
NDEL1-209ENST00000580738 IGHV1-58A0A0C4DH39 117 aa11.64□□□□□ -0.55
NDEL1-209ENST00000580738 PFDN1O60925 122 aa11.64□□□□□ -0.55
NDEL1-209ENST00000580738 GIPP09681 153 aaPredicted RBP11.64□□□□□ -0.55
NDEL1-209ENST00000580738 FGF6P10767 208 aa11.64□□□□□ -0.55
NDEL1-209ENST00000580738 RPL35P42766 123 aaKnown RBP11.64□□□□□ -0.55
NDEL1-209ENST00000580738 SYCNQ0VAF6 134 aa11.64□□□□□ -0.55
NDEL1-209ENST00000580738 GAGE2BQ13066 116 aa11.64□□□□□ -0.55
NDEL1-209ENST00000580738 CCL25O15444 150 aa11.63□□□□□ -0.55
NDEL1-209ENST00000580738 MT-ND6P03923 174 aa11.63□□□□□ -0.55
NDEL1-209ENST00000580738 TRGC1P0CF51 173 aa11.63□□□□□ -0.55
NDEL1-209ENST00000580738 LYZL1Q6UWQ5 148 aa11.63□□□□□ -0.55
NDEL1-209ENST00000580738 TRAV26-2A0A0B4J265 109 aa11.62□□□□□ -0.55
NDEL1-209ENST00000580738 KRTAP9-6A0A140TA67 174 aa11.62□□□□□ -0.55
NDEL1-209ENST00000580738 RPS20P60866 119 aaKnown RBP11.62□□□□□ -0.55
NDEL1-209ENST00000580738 GATD1Q8NB37 220 aa11.62□□□□□ -0.55
NDEL1-209ENST00000580738 OR5A1Q8NGJ0 315 aa11.62□□□□□ -0.55
NDEL1-209ENST00000580738 MBD3L1Q8WWY6 194 aa11.62□□□□□ -0.55
NDEL1-209ENST00000580738 FAT4Q6V0I7 4981 aa11.62□□□□□ -0.55
NDEL1-209ENST00000580738 LINC00959A0A1B0GUT2 108 aa11.61□□□□□ -0.55
NDEL1-209ENST00000580738 F2Z2F3 143 aa11.61□□□□□ -0.55
NDEL1-209ENST00000580738 C1orf137Q5JT78 98 aa11.61□□□□□ -0.55
NDEL1-209ENST00000580738 LOC107984640A0A0U1RRK4 108 aa11.6□□□□□ -0.55
NDEL1-209ENST00000580738 C19orf71A6NCJ1 209 aa11.6□□□□□ -0.55
NDEL1-209ENST00000580738 ZNF561-AS1K7EIQ3 104 aa11.6□□□□□ -0.55
NDEL1-209ENST00000580738 FAM213BQ8TBF2 198 aa11.6□□□□□ -0.55
NDEL1-209ENST00000580738 A0A0U1RQV1 116 aa11.59□□□□□ -0.55
NDEL1-209ENST00000580738 H7C423 109 aa11.59□□□□□ -0.55
NDEL1-209ENST00000580738 CENPWQ5EE01 88 aa11.59□□□□□ -0.55
NDEL1-209ENST00000580738 KCNRGQ8N5I3 272 aa11.59□□□□□ -0.55
NDEL1-209ENST00000580738 RPL39LQ96EH5 51 aaKnown RBP11.59□□□□□ -0.55
NDEL1-209ENST00000580738 NCR2O95944 276 aa11.58□□□□□ -0.56
NDEL1-209ENST00000580738 APCSP02743 223 aa11.58□□□□□ -0.56
NDEL1-209ENST00000580738 BCL2P10415 239 aa11.58□□□□□ -0.56
NDEL1-209ENST00000580738 CAMPP49913 170 aa11.58□□□□□ -0.56
NDEL1-209ENST00000580738 PRR4Q16378 134 aa11.58□□□□□ -0.56
NDEL1-209ENST00000580738 C9orf116Q5BN46 136 aaPredicted RBP11.58□□□□□ -0.56
NDEL1-209ENST00000580738 PHF5AQ7RTV0 110 aaKnown RBP11.58□□□□□ -0.56
NDEL1-209ENST00000580738 G3V3Q6 166 aa11.57□□□□□ -0.56
NDEL1-209ENST00000580738 IFNA1P01562 189 aa11.57□□□□□ -0.56
NDEL1-209ENST00000580738 IGLV4-69A0A075B6H9 119 aa11.56□□□□□ -0.56
NDEL1-209ENST00000580738 ARPC5O15511 151 aa11.56□□□□□ -0.56
NDEL1-209ENST00000580738 ZNF25P17030 456 aaPredicted RBP11.56□□□□□ -0.56
NDEL1-209ENST00000580738 LCE2AQ5TA79 106 aaPredicted RBP11.56□□□□□ -0.56
NDEL1-209ENST00000580738 C9orf62Q8N4C0 152 aa11.56□□□□□ -0.56
NDEL1-209ENST00000580738 DIRC1Q969H9 104 aa11.56□□□□□ -0.56
NDEL1-209ENST00000580738 XKRY2A2RUG3 117 aa11.55□□□□□ -0.56
NDEL1-209ENST00000580738 IGLV7-43P04211 117 aa11.55□□□□□ -0.56
NDEL1-209ENST00000580738 TWIST1Q15672 202 aa11.55□□□□□ -0.56
NDEL1-209ENST00000580738 CD164L2Q6UWJ8 174 aa11.55□□□□□ -0.56
NDEL1-209ENST00000580738 C11orf52Q96A22 123 aa11.55□□□□□ -0.56
NDEL1-209ENST00000580738 RAB19A4D1S5 217 aa11.54□□□□□ -0.56
NDEL1-209ENST00000580738 NUP35Q8NFH5 326 aa11.54□□□□□ -0.56
NDEL1-209ENST00000580738 TMEM101Q96IK0 257 aa11.54□□□□□ -0.56
NDEL1-209ENST00000580738 BTF3L4Q96K17 158 aa11.54□□□□□ -0.56
NDEL1-209ENST00000580738 SDHAF1A6NFY7 115 aa11.53□□□□□ -0.56
NDEL1-209ENST00000580738 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.53□□□□□ -0.56
NDEL1-209ENST00000580738 CTRLP40313 264 aa11.53□□□□□ -0.56
NDEL1-209ENST00000580738 FOXA3P55318 350 aaPredicted RBP11.53□□□□□ -0.56
NDEL1-209ENST00000580738 MEF2BQ02080 365 aaPredicted RBP11.53□□□□□ -0.56
NDEL1-209ENST00000580738 SS18Q15532 418 aa11.53□□□□□ -0.56
NDEL1-209ENST00000580738 ISOC2Q96AB3 205 aa11.53□□□□□ -0.56
NDEL1-209ENST00000580738 H0Y9J4 135 aa11.52□□□□□ -0.57
NDEL1-209ENST00000580738 APOMO95445 188 aa11.52□□□□□ -0.57
NDEL1-209ENST00000580738 H2AFB1P0C5Y9 115 aa11.52□□□□□ -0.57
NDEL1-209ENST00000580738 CCL20P78556 96 aa11.52□□□□□ -0.57
NDEL1-209ENST00000580738 KRTAP11-1Q8IUC1 163 aa11.52□□□□□ -0.57
NDEL1-209ENST00000580738 UMAD1C9J7I0 102 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms