RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 ISOC2Q96AB3 205 aa17.27■□□□□ 0.36
LIMD2-208ENST00000579814 TMEM70Q9BUB7 260 aa17.27■□□□□ 0.36
LIMD2-208ENST00000579814 PRR34Q9NV39 138 aa17.27■□□□□ 0.36
LIMD2-208ENST00000579814 UBE2L6O14933 153 aa17.26■□□□□ 0.35
LIMD2-208ENST00000579814 AMTP48728 403 aa17.26■□□□□ 0.35
LIMD2-208ENST00000579814 RPL23P62829 140 aaKnown RBP17.26■□□□□ 0.35
LIMD2-208ENST00000579814 SRSF3P84103 164 aaKnown RBP17.26■□□□□ 0.35
LIMD2-208ENST00000579814 NAT8Q9UHE5 227 aa17.26■□□□□ 0.35
LIMD2-208ENST00000579814 V9GYV3 84 aa17.26■□□□□ 0.35
LIMD2-208ENST00000579814 A0A1B0GUV1 79 aa17.25■□□□□ 0.35
LIMD2-208ENST00000579814 ADIRFQ15847 76 aa17.25■□□□□ 0.35
LIMD2-208ENST00000579814 RPL39LQ96EH5 51 aaKnown RBP17.25■□□□□ 0.35
LIMD2-208ENST00000579814 C14orf177Q52M58 125 aa17.24■□□□□ 0.35
LIMD2-208ENST00000579814 CLPSL2Q6UWE3 100 aa17.24■□□□□ 0.35
LIMD2-208ENST00000579814 TMEM191AQ9H0A3 160 aa17.24■□□□□ 0.35
LIMD2-208ENST00000579814 RIGQ13278 110 aa17.23■□□□□ 0.35
LIMD2-208ENST00000579814 REG3AQ06141 175 aa17.22■□□□□ 0.35
LIMD2-208ENST00000579814 C20orf203Q8NBC4 194 aa17.22■□□□□ 0.35
LIMD2-208ENST00000579814 NCR2O95944 276 aa17.21■□□□□ 0.35
LIMD2-208ENST00000579814 NUP35Q8NFH5 326 aa17.21■□□□□ 0.35
LIMD2-208ENST00000579814 NAT8BQ9UHF3 227 aa17.21■□□□□ 0.35
LIMD2-208ENST00000579814 SDHAF1A6NFY7 115 aa17.2■□□□□ 0.34
LIMD2-208ENST00000579814 EPM2AB3EWF7 344 aa17.2■□□□□ 0.34
LIMD2-208ENST00000579814 HLA-DQA1P01909 254 aa17.2■□□□□ 0.34
LIMD2-208ENST00000579814 IGLV4-60A0A075B6I1 120 aa17.19■□□□□ 0.34
LIMD2-208ENST00000579814 TRBV6-5A0A0K0K1A5 114 aa17.19■□□□□ 0.34
LIMD2-208ENST00000579814 ABCA13Q86UQ4 5058 aa17.18■□□□□ 0.34
LIMD2-208ENST00000579814 TRAV8-4A0A0B4J246 113 aa17.18■□□□□ 0.34
LIMD2-208ENST00000579814 PMCHP20382 165 aa17.18■□□□□ 0.34
LIMD2-208ENST00000579814 I3L3M4 83 aa17.17■□□□□ 0.34
LIMD2-208ENST00000579814 APCSP02743 223 aa17.17■□□□□ 0.34
LIMD2-208ENST00000579814 RAB4AP20338 218 aa17.17■□□□□ 0.34
LIMD2-208ENST00000579814 MRAP2Q96G30 205 aa17.17■□□□□ 0.34
LIMD2-208ENST00000579814 RNF185Q96GF1 192 aa17.17■□□□□ 0.34
LIMD2-208ENST00000579814 ST20Q9HBF5 79 aa17.17■□□□□ 0.34
LIMD2-208ENST00000579814 FAM30AQ9NZY2 134 aa17.17■□□□□ 0.34
LIMD2-208ENST00000579814 USP17L23D6RBM5 183 aa17.16■□□□□ 0.34
LIMD2-208ENST00000579814 AMN1Q8IY45 258 aa17.16■□□□□ 0.34
LIMD2-208ENST00000579814 IGLV10-54A0A075B6I4 117 aa17.15■□□□□ 0.34
LIMD2-208ENST00000579814 RAB14P61106 215 aa17.15■□□□□ 0.34
LIMD2-208ENST00000579814 AMMECR1LQ6DCA0 310 aa17.15■□□□□ 0.34
LIMD2-208ENST00000579814 SMIM27A0A1W2PRY6 76 aa17.14■□□□□ 0.33
LIMD2-208ENST00000579814 H7C423 109 aa17.14■□□□□ 0.33
LIMD2-208ENST00000579814 GAS8-AS1O95177 125 aa17.14■□□□□ 0.33
LIMD2-208ENST00000579814 HAMPP81172 84 aa17.14■□□□□ 0.33
LIMD2-208ENST00000579814 KRTAP26-1Q6PEX3 210 aa17.14■□□□□ 0.33
LIMD2-208ENST00000579814 SMR3BP02814 79 aaPredicted RBP17.13■□□□□ 0.33
LIMD2-208ENST00000579814 LINC01620Q4KN68 170 aa17.12■□□□□ 0.33
LIMD2-208ENST00000579814 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.11■□□□□ 0.33
LIMD2-208ENST00000579814 IGKV2-29A2NJV5 120 aaPredicted RBP17.11■□□□□ 0.33
LIMD2-208ENST00000579814 RNASEKQ6P5S7 137 aaKnown RBP17.11■□□□□ 0.33
LIMD2-208ENST00000579814 PPP1R17O96001 155 aa17.1■□□□□ 0.33
LIMD2-208ENST00000579814 RPS10P46783 165 aaKnown RBP17.1■□□□□ 0.33
LIMD2-208ENST00000579814 Q5VSD8 79 aa17.1■□□□□ 0.33
LIMD2-208ENST00000579814 Q6ZSA8 131 aa17.1■□□□□ 0.33
LIMD2-208ENST00000579814 A0A1B0GW15 77 aa17.09■□□□□ 0.33
LIMD2-208ENST00000579814 FAM229AH3BQW9 127 aa17.09■□□□□ 0.33
LIMD2-208ENST00000579814 PRSS1P07477 247 aa17.09■□□□□ 0.33
LIMD2-208ENST00000579814 POLR2KP53803 58 aaKnown RBP17.09■□□□□ 0.33
LIMD2-208ENST00000579814 FGF6P10767 208 aa17.08■□□□□ 0.32
LIMD2-208ENST00000579814 CAMPP49913 170 aa17.08■□□□□ 0.32
LIMD2-208ENST00000579814 CLRN3Q8NCR9 226 aa17.08■□□□□ 0.32
LIMD2-208ENST00000579814 TMEM242Q9NWH2 141 aa17.08■□□□□ 0.32
LIMD2-208ENST00000579814 TRBV27A0A0K0K1C4 114 aa17.07■□□□□ 0.32
LIMD2-208ENST00000579814 SMKR1H3BMG3 65 aa17.07■□□□□ 0.32
LIMD2-208ENST00000579814 TSHBP01222 138 aa17.07■□□□□ 0.32
LIMD2-208ENST00000579814 FAM104BQ5XKR9 115 aa17.07■□□□□ 0.32
LIMD2-208ENST00000579814 DGAT2L7PQ6IED9 249 aa17.07■□□□□ 0.32
LIMD2-208ENST00000579814 BTF3L4Q96K17 158 aa17.07■□□□□ 0.32
LIMD2-208ENST00000579814 IGKV3OR2-268A0A0C4DH90 116 aa17.06■□□□□ 0.32
LIMD2-208ENST00000579814 VCYO14598 125 aa17.06■□□□□ 0.32
LIMD2-208ENST00000579814 ZNF25P17030 456 aaPredicted RBP17.06■□□□□ 0.32
LIMD2-208ENST00000579814 S100A8P05109 93 aa17.05■□□□□ 0.32
LIMD2-208ENST00000579814 ESDP10768 282 aa17.05■□□□□ 0.32
LIMD2-208ENST00000579814 TMEM101Q96IK0 257 aa17.05■□□□□ 0.32
LIMD2-208ENST00000579814 MRPL51Q4U2R6 128 aaKnown RBP17.04■□□□□ 0.32
LIMD2-208ENST00000579814 FAT1Q14517 4588 aa17.04■□□□□ 0.32
LIMD2-208ENST00000579814 LINC00862A6NCI5 91 aa17.03■□□□□ 0.32
LIMD2-208ENST00000579814 SUMO2P61956 95 aaKnown RBP17.03■□□□□ 0.32
LIMD2-208ENST00000579814 NRACQ8N912 160 aa17.03■□□□□ 0.32
LIMD2-208ENST00000579814 DNAH8Q96JB1 4490 aa17.03■□□□□ 0.32
LIMD2-208ENST00000579814 PPP1R2P9O14990 202 aa17.02■□□□□ 0.32
LIMD2-208ENST00000579814 FCER1GP30273 86 aa17.02■□□□□ 0.32
LIMD2-208ENST00000579814 MRPL54Q6P161 138 aaKnown RBP17.02■□□□□ 0.32
LIMD2-208ENST00000579814 GAGE12HA6NDE8 117 aa17.01■□□□□ 0.31
LIMD2-208ENST00000579814 F8W036 122 aa17.01■□□□□ 0.31
LIMD2-208ENST00000579814 INAFM2P0DMQ5 153 aa17.01■□□□□ 0.31
LIMD2-208ENST00000579814 HBBP68871 147 aa17.01■□□□□ 0.31
LIMD2-208ENST00000579814 OR5A1Q8NGJ0 315 aa17.01■□□□□ 0.31
LIMD2-208ENST00000579814 hDV102S1A0JD36 115 aa17■□□□□ 0.31
LIMD2-208ENST00000579814 C7orf77A4D0Y5 90 aa17■□□□□ 0.31
LIMD2-208ENST00000579814 CKS2P33552 79 aa17■□□□□ 0.31
LIMD2-208ENST00000579814 PNRC1Q12796 327 aaPredicted RBP17■□□□□ 0.31
LIMD2-208ENST00000579814 KIR2DL4Q99706 377 aa17■□□□□ 0.31
LIMD2-208ENST00000579814 CLLU1Q5K131 121 aa16.99■□□□□ 0.31
LIMD2-208ENST00000579814 CFAP161Q6P656 301 aa16.99■□□□□ 0.31
LIMD2-208ENST00000579814 C9orf163Q8N9P6 203 aa16.99■□□□□ 0.31
LIMD2-208ENST00000579814 CHCHD10Q8WYQ3 142 aaPredicted RBP16.99■□□□□ 0.31
LIMD2-208ENST00000579814 CHAC1Q9BUX1 264 aa16.99■□□□□ 0.31
LIMD2-208ENST00000579814 AP5S1Q9NUS5 200 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms