RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 COX11Q9Y6N1 276 aa7.08□□□□□ -1.28
SUPT4H1-203ENST00000579289 H7C1H1 209 aa7.07□□□□□ -1.28
SUPT4H1-203ENST00000579289 GATCO43716 136 aaKnown RBP7.07□□□□□ -1.28
SUPT4H1-203ENST00000579289 SRP19P09132 144 aaKnown RBP7.07□□□□□ -1.28
SUPT4H1-203ENST00000579289 FAM231DQ6ZW35 169 aa7.07□□□□□ -1.28
SUPT4H1-203ENST00000579289 C9orf163Q8N9P6 203 aa7.07□□□□□ -1.28
SUPT4H1-203ENST00000579289 UBE2WQ96B02 151 aa7.07□□□□□ -1.28
SUPT4H1-203ENST00000579289 SMIM7Q9BQ49 75 aa7.07□□□□□ -1.28
SUPT4H1-203ENST00000579289 CHCHD5Q9BSY4 110 aa7.07□□□□□ -1.28
SUPT4H1-203ENST00000579289 CHCHD7Q9BUK0 85 aa7.07□□□□□ -1.28
SUPT4H1-203ENST00000579289 CNFNQ9BYD5 112 aa7.07□□□□□ -1.28
SUPT4H1-203ENST00000579289 IGKV2D-24A0A075B6R9 120 aa7.06□□□□□ -1.28
SUPT4H1-203ENST00000579289 ZNF727A8MUV8 499 aa7.06□□□□□ -1.28
SUPT4H1-203ENST00000579289 ELOBQ15370 118 aa7.06□□□□□ -1.28
SUPT4H1-203ENST00000579289 MPV17L2Q567V2 206 aa7.06□□□□□ -1.28
SUPT4H1-203ENST00000579289 RASL11AQ6T310 242 aa7.06□□□□□ -1.28
SUPT4H1-203ENST00000579289 A0A0J9YXV3 536 aa7.05□□□□□ -1.28
SUPT4H1-203ENST00000579289 A8MWL6 223 aa7.05□□□□□ -1.28
SUPT4H1-203ENST00000579289 NDUFS6O75380 124 aaKnown RBP7.05□□□□□ -1.28
SUPT4H1-203ENST00000579289 PRSS1P07477 247 aa7.05□□□□□ -1.28
SUPT4H1-203ENST00000579289 FOXA3P55318 350 aaPredicted RBP7.05□□□□□ -1.28
SUPT4H1-203ENST00000579289 GAGE6Q13070 117 aa7.05□□□□□ -1.28
SUPT4H1-203ENST00000579289 TMEM97Q5BJF2 176 aa7.05□□□□□ -1.28
SUPT4H1-203ENST00000579289 TEX261Q6UWH6 196 aa7.05□□□□□ -1.28
SUPT4H1-203ENST00000579289 LINC01551Q86U37 167 aa7.05□□□□□ -1.28
SUPT4H1-203ENST00000579289 C15orf54Q8N8G6 183 aa7.05□□□□□ -1.28
SUPT4H1-203ENST00000579289 RMI2Q96E14 147 aa7.05□□□□□ -1.28
SUPT4H1-203ENST00000579289 PGLYRP4Q96LB8 373 aa7.05□□□□□ -1.28
SUPT4H1-203ENST00000579289 TRBV25-1A0A075B6N4 114 aa7.04□□□□□ -1.28
SUPT4H1-203ENST00000579289 TRAV26-2A0A0B4J265 109 aa7.04□□□□□ -1.28
SUPT4H1-203ENST00000579289 C9JQL5 133 aa7.04□□□□□ -1.28
SUPT4H1-203ENST00000579289 ANGP03950 147 aaKnown RBP7.04□□□□□ -1.28
SUPT4H1-203ENST00000579289 KRTAP26-1Q6PEX3 210 aa7.04□□□□□ -1.28
SUPT4H1-203ENST00000579289 ENHOQ6UWT2 76 aa7.04□□□□□ -1.28
SUPT4H1-203ENST00000579289 NIT2Q9NQR4 276 aa7.04□□□□□ -1.28
SUPT4H1-203ENST00000579289 IGHV1-24A0A0C4DH33 117 aa7.03□□□□□ -1.28
SUPT4H1-203ENST00000579289 PKIAP61925 76 aa7.03□□□□□ -1.28
SUPT4H1-203ENST00000579289 RBX1P62877 108 aa7.03□□□□□ -1.28
SUPT4H1-203ENST00000579289 SRSF3P84103 164 aaKnown RBP7.03□□□□□ -1.28
SUPT4H1-203ENST00000579289 Q0VG73 95 aa7.03□□□□□ -1.28
SUPT4H1-203ENST00000579289 IQCJQ1A5X6 159 aa7.03□□□□□ -1.28
SUPT4H1-203ENST00000579289 CT83Q5H943 113 aa7.03□□□□□ -1.28
SUPT4H1-203ENST00000579289 GATD1Q8NB37 220 aa7.03□□□□□ -1.28
SUPT4H1-203ENST00000579289 CRPP02741 224 aa7.02□□□□□ -1.29
SUPT4H1-203ENST00000579289 TMEM241Q24JQ0 296 aa7.02□□□□□ -1.29
SUPT4H1-203ENST00000579289 SMIM15Q7Z3B0 74 aa7.02□□□□□ -1.29
SUPT4H1-203ENST00000579289 TSKUQ8WUA8 353 aa7.02□□□□□ -1.29
SUPT4H1-203ENST00000579289 RPL39LQ96EH5 51 aaKnown RBP7.02□□□□□ -1.29
SUPT4H1-203ENST00000579289 C1orf43Q9BWL3 253 aa7.02□□□□□ -1.29
SUPT4H1-203ENST00000579289 OSTCQ9NRP0 149 aa7.02□□□□□ -1.29
SUPT4H1-203ENST00000579289 HIGD1CA8MV81 97 aa7.01□□□□□ -1.29
SUPT4H1-203ENST00000579289 RPL23P62829 140 aaKnown RBP7.01□□□□□ -1.29
SUPT4H1-203ENST00000579289 PEA15Q15121 130 aa7.01□□□□□ -1.29
SUPT4H1-203ENST00000579289 DGAT2L7PQ6IED9 249 aa7.01□□□□□ -1.29
SUPT4H1-203ENST00000579289 CLPSL2Q6UWE3 100 aa7.01□□□□□ -1.29
SUPT4H1-203ENST00000579289 LINC00269Q8N2A0 174 aa7.01□□□□□ -1.29
SUPT4H1-203ENST00000579289 BORCS7Q96B45 105 aa7.01□□□□□ -1.29
SUPT4H1-203ENST00000579289 TMEM243Q9BU79 118 aa7.01□□□□□ -1.29
SUPT4H1-203ENST00000579289 A0A1B0GUT8 65 aa7□□□□□ -1.29
SUPT4H1-203ENST00000579289 USP17L23D6RBM5 183 aa7□□□□□ -1.29
SUPT4H1-203ENST00000579289 SLPIP03973 132 aa7□□□□□ -1.29
SUPT4H1-203ENST00000579289 COTL1Q14019 142 aa7□□□□□ -1.29
SUPT4H1-203ENST00000579289 MIAQ16674 131 aa7□□□□□ -1.29
SUPT4H1-203ENST00000579289 FAM74A3Q4VXF1 159 aa7□□□□□ -1.29
SUPT4H1-203ENST00000579289 ISOC2Q96AB3 205 aa7□□□□□ -1.29
SUPT4H1-203ENST00000579289 GFRA4Q9GZZ7 299 aa7□□□□□ -1.29
SUPT4H1-203ENST00000579289 PRR34Q9NV39 138 aa7□□□□□ -1.29
SUPT4H1-203ENST00000579289 V9GYV3 84 aa7□□□□□ -1.29
SUPT4H1-203ENST00000579289 MUC17Q685J3 4493 aa7□□□□□ -1.29
SUPT4H1-203ENST00000579289 IGLV4-60A0A075B6I1 120 aa6.99□□□□□ -1.29
SUPT4H1-203ENST00000579289 FAM231BA6NCW3 169 aa6.99□□□□□ -1.29
SUPT4H1-203ENST00000579289 AMTP48728 403 aa6.99□□□□□ -1.29
SUPT4H1-203ENST00000579289 ADIRFQ15847 76 aa6.99□□□□□ -1.29
SUPT4H1-203ENST00000579289 C20orf203Q8NBC4 194 aa6.99□□□□□ -1.29
SUPT4H1-203ENST00000579289 NAT8Q9UHE5 227 aa6.99□□□□□ -1.29
SUPT4H1-203ENST00000579289 A0A087WYN8 130 aa6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 A0A1B0GUV1 79 aa6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 PHOX2AO14813 284 aa6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 UBE2L6O14933 153 aa6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 HLA-DQA1P01909 254 aa6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 REG3AQ06141 175 aa6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 SRSF9Q13242 221 aaKnown RBP eCLIP6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 C14orf177Q52M58 125 aa6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 NUP35Q8NFH5 326 aa6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 RNF185Q96GF1 192 aa6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 TMEM191AQ9H0A3 160 aa6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 SMDT1Q9H4I9 107 aa6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 PLAC8Q9NZF1 115 aa6.98□□□□□ -1.29
SUPT4H1-203ENST00000579289 SDHAF1A6NFY7 115 aa6.97□□□□□ -1.29
SUPT4H1-203ENST00000579289 CHTF8P0CG12 524 aa6.97□□□□□ -1.29
SUPT4H1-203ENST00000579289 RAB4AP20338 218 aa6.97□□□□□ -1.29
SUPT4H1-203ENST00000579289 SPACA4Q8TDM5 124 aa6.97□□□□□ -1.29
SUPT4H1-203ENST00000579289 IGLV10-54A0A075B6I4 117 aa6.96□□□□□ -1.3
SUPT4H1-203ENST00000579289 RPS10P46783 165 aaKnown RBP6.96□□□□□ -1.3
SUPT4H1-203ENST00000579289 CNBPP62633 177 aaKnown RBP6.96□□□□□ -1.3
SUPT4H1-203ENST00000579289 RIGQ13278 110 aa6.96□□□□□ -1.3
SUPT4H1-203ENST00000579289 AMN1Q8IY45 258 aa6.96□□□□□ -1.3
SUPT4H1-203ENST00000579289 NAT8BQ9UHF3 227 aa6.96□□□□□ -1.3
SUPT4H1-203ENST00000579289 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.95□□□□□ -1.3
SUPT4H1-203ENST00000579289 TRBV6-5A0A0K0K1A5 114 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms