RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 TMUB2Q71RG4 321 aa5.35□□□□□ -1.55
CASC3-206ENST00000579238 FER1L6-AS1Q8NA97 138 aa5.35□□□□□ -1.55
CASC3-206ENST00000579238 TPPP3Q9BW30 176 aa5.35□□□□□ -1.55
CASC3-206ENST00000579238 NIT2Q9NQR4 276 aa5.35□□□□□ -1.55
CASC3-206ENST00000579238 A0A1B0GV50 99 aa5.34□□□□□ -1.55
CASC3-206ENST00000579238 UMAD1C9J7I0 102 aa5.34□□□□□ -1.55
CASC3-206ENST00000579238 F2Z2F3 143 aa5.34□□□□□ -1.55
CASC3-206ENST00000579238 G3V3Q6 166 aa5.34□□□□□ -1.55
CASC3-206ENST00000579238 ARPC5O15511 151 aa5.34□□□□□ -1.55
CASC3-206ENST00000579238 RPL35P42766 123 aaKnown RBP5.34□□□□□ -1.55
CASC3-206ENST00000579238 RPS20P60866 119 aaKnown RBP5.34□□□□□ -1.55
CASC3-206ENST00000579238 OR2D3Q8NGH3 330 aa5.34□□□□□ -1.55
CASC3-206ENST00000579238 LYPD6BQ8NI32 183 aa5.34□□□□□ -1.55
CASC3-206ENST00000579238 FAM213BQ8TBF2 198 aa5.34□□□□□ -1.55
CASC3-206ENST00000579238 LINC00474Q9P2X8 69 aa5.34□□□□□ -1.55
CASC3-206ENST00000579238 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
CASC3-206ENST00000579238 GVQW2A0A096LPI5 108 aaPredicted RBP5.33□□□□□ -1.56
CASC3-206ENST00000579238 IGKV3OR2-268A0A0C4DH90 116 aa5.33□□□□□ -1.56
CASC3-206ENST00000579238 TRGC1P0CF51 173 aa5.33□□□□□ -1.56
CASC3-206ENST00000579238 KCNRGQ8N5I3 272 aa5.33□□□□□ -1.56
CASC3-206ENST00000579238 CHCHD10Q8WYQ3 142 aaPredicted RBP5.33□□□□□ -1.56
CASC3-206ENST00000579238 PKIGQ9Y2B9 76 aa5.33□□□□□ -1.56
CASC3-206ENST00000579238 A0A096LNI7 61 aa5.32□□□□□ -1.56
CASC3-206ENST00000579238 XKRY2A2RUG3 117 aa5.32□□□□□ -1.56
CASC3-206ENST00000579238 C19orf71A6NCJ1 209 aa5.32□□□□□ -1.56
CASC3-206ENST00000579238 SRSF9Q13242 221 aaKnown RBP eCLIP5.32□□□□□ -1.56
CASC3-206ENST00000579238 CENPWQ5EE01 88 aa5.32□□□□□ -1.56
CASC3-206ENST00000579238 C11orf52Q96A22 123 aa5.32□□□□□ -1.56
CASC3-206ENST00000579238 GAS8-AS1O95177 125 aa5.31□□□□□ -1.56
CASC3-206ENST00000579238 H2AFB1P0C5Y9 115 aa5.31□□□□□ -1.56
CASC3-206ENST00000579238 NTF3P20783 257 aa5.31□□□□□ -1.56
CASC3-206ENST00000579238 AMMECR1LQ6DCA0 310 aa5.31□□□□□ -1.56
CASC3-206ENST00000579238 LYZL1Q6UWQ5 148 aa5.31□□□□□ -1.56
CASC3-206ENST00000579238 Q6ZRP5 223 aa5.31□□□□□ -1.56
CASC3-206ENST00000579238 SMIM12Q96EX1 92 aa5.31□□□□□ -1.56
CASC3-206ENST00000579238 MANBALQ9NQG1 85 aa5.31□□□□□ -1.56
CASC3-206ENST00000579238 H7C423 109 aa5.3□□□□□ -1.56
CASC3-206ENST00000579238 NCR2O95944 276 aa5.3□□□□□ -1.56
CASC3-206ENST00000579238 IFNA1P01562 189 aa5.3□□□□□ -1.56
CASC3-206ENST00000579238 FOXI1Q12951 378 aa5.3□□□□□ -1.56
CASC3-206ENST00000579238 ZNF345Q14585 488 aa5.3□□□□□ -1.56
CASC3-206ENST00000579238 RNASEKQ6P5S7 137 aaKnown RBP5.3□□□□□ -1.56
CASC3-206ENST00000579238 Q6ZNX1 250 aa5.3□□□□□ -1.56
CASC3-206ENST00000579238 C9orf62Q8N4C0 152 aa5.3□□□□□ -1.56
CASC3-206ENST00000579238 GATD1Q8NB37 220 aa5.3□□□□□ -1.56
CASC3-206ENST00000579238 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.29□□□□□ -1.56
CASC3-206ENST00000579238 IGHV1-58A0A0C4DH39 117 aa5.29□□□□□ -1.56
CASC3-206ENST00000579238 IGKV2-29A2NJV5 120 aaPredicted RBP5.29□□□□□ -1.56
CASC3-206ENST00000579238 FGF6P10767 208 aa5.29□□□□□ -1.56
CASC3-206ENST00000579238 CTRLP40313 264 aa5.29□□□□□ -1.56
CASC3-206ENST00000579238 GNG4P50150 75 aa5.29□□□□□ -1.56
CASC3-206ENST00000579238 CCL20P78556 96 aa5.29□□□□□ -1.56
CASC3-206ENST00000579238 OR5A1Q8NGJ0 315 aa5.29□□□□□ -1.56
CASC3-206ENST00000579238 CARD19Q96LW7 228 aa5.29□□□□□ -1.56
CASC3-206ENST00000579238 BIN3Q9NQY0 253 aa5.29□□□□□ -1.56
CASC3-206ENST00000579238 GNG13Q9P2W3 67 aa5.29□□□□□ -1.56
CASC3-206ENST00000579238 TRAV26-2A0A0B4J265 109 aa5.28□□□□□ -1.56
CASC3-206ENST00000579238 RAB19A4D1S5 217 aa5.28□□□□□ -1.56
CASC3-206ENST00000579238 APCSP02743 223 aa5.28□□□□□ -1.56
CASC3-206ENST00000579238 ZNF25P17030 456 aaPredicted RBP5.28□□□□□ -1.56
CASC3-206ENST00000579238 XCL1P47992 114 aa5.28□□□□□ -1.56
CASC3-206ENST00000579238 TWIST1Q15672 202 aa5.28□□□□□ -1.56
CASC3-206ENST00000579238 CNFNQ9BYD5 112 aa5.28□□□□□ -1.56
CASC3-206ENST00000579238 TRAV1-1A0A0B4J248 108 aa5.27□□□□□ -1.57
CASC3-206ENST00000579238 LINC00959A0A1B0GUT2 108 aa5.27□□□□□ -1.57
CASC3-206ENST00000579238 KANTRA0A1W2PQU2 76 aa5.27□□□□□ -1.57
CASC3-206ENST00000579238 SMLR1H3BR10 107 aa5.27□□□□□ -1.57
CASC3-206ENST00000579238 CCL25O15444 150 aa5.27□□□□□ -1.57
CASC3-206ENST00000579238 EIF5AP63241 154 aaKnown RBP5.27□□□□□ -1.57
CASC3-206ENST00000579238 SYCNQ0VAF6 134 aa5.27□□□□□ -1.57
CASC3-206ENST00000579238 RPL39LQ96EH5 51 aaKnown RBP5.27□□□□□ -1.57
CASC3-206ENST00000579238 LINC00526Q96FQ7 95 aa5.27□□□□□ -1.57
CASC3-206ENST00000579238 BTF3L4Q96K17 158 aa5.27□□□□□ -1.57
CASC3-206ENST00000579238 LPAP08519 4548 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 TRBV20OR9-2A0A075B6H5 130 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 FAM231BA6NCW3 169 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 SDHAF1A6NFY7 115 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 HMSDA8MTL9 139 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 ZNF561-AS1K7EIQ3 104 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 BCL2L11O43521 198 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 PDE6DO43924 150 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 PTTG1IPP53801 180 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 TEX261Q6UWH6 196 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 SMIM15Q7Z3B0 74 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 NUDT10Q8NFP7 164 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 NUDT11Q96G61 164 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 TMEM101Q96IK0 257 aa5.26□□□□□ -1.57
CASC3-206ENST00000579238 LOC107984640A0A0U1RRK4 108 aa5.25□□□□□ -1.57
CASC3-206ENST00000579238 TEX46H3BTG2 121 aa5.25□□□□□ -1.57
CASC3-206ENST00000579238 I3L3M4 83 aa5.25□□□□□ -1.57
CASC3-206ENST00000579238 ESDP10768 282 aa5.25□□□□□ -1.57
CASC3-206ENST00000579238 PMCHP20382 165 aa5.25□□□□□ -1.57
CASC3-206ENST00000579238 CAMPP49913 170 aa5.25□□□□□ -1.57
CASC3-206ENST00000579238 MEF2BQ02080 365 aaPredicted RBP5.25□□□□□ -1.57
CASC3-206ENST00000579238 GAGE2BQ13066 116 aa5.25□□□□□ -1.57
CASC3-206ENST00000579238 SS18Q15532 418 aa5.25□□□□□ -1.57
CASC3-206ENST00000579238 CD164L2Q6UWJ8 174 aa5.25□□□□□ -1.57
CASC3-206ENST00000579238 ZNF664Q8N3J9 261 aa5.25□□□□□ -1.57
CASC3-206ENST00000579238 ISOC2Q96AB3 205 aa5.25□□□□□ -1.57
CASC3-206ENST00000579238 RPP21Q9H633 154 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms