RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 LRP1BQ9NZR2 4599 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 BIRC6Q9NR09 4857 aa2.56□□□□□ -2
SMARCE1-215ENST00000578995 IGLV2-18A0A075B6J9 118 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 TRBV7-3A0A075B6L6 115 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 TRBV24-1A0A075B6N3 115 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 TRAV9-1A0A075B6T8 112 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 GAGE12JA6NER3 117 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 SMKR1H3BMG3 65 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 RTL8CO15255 209 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 LY6G6CO95867 125 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 MT-ND4LP03901 98 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 TRGC1P0CF51 173 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 SRIP30626 198 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 POLR2KP53803 58 aaKnown RBP2.55□□□□□ -2
SMARCE1-215ENST00000578995 SSTP61278 116 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 GAGE1Q13065 139 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 GAGE4Q13068 117 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 GAGE5Q13069 117 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 RHEBQ15382 184 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 TWIST1Q15672 202 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 ZNF56Q15929 161 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 KIAA1109Q2LD37 5005 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 MRPL51Q4U2R6 128 aaKnown RBP2.55□□□□□ -2
SMARCE1-215ENST00000578995 GAGE13Q4V321 117 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 LELP1Q5T871 98 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 MRPL54Q6P161 138 aaKnown RBP2.55□□□□□ -2
SMARCE1-215ENST00000578995 RASL11AQ6T310 242 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 TMEM136Q6ZRR5 245 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 ATP6V0E2Q8NHE4 81 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 FAM104AQ969W3 186 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 DNAJC30Q96LL9 226 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 CTDSP1Q9GZU7 261 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 NIT2Q9NQR4 276 aa2.55□□□□□ -2
SMARCE1-215ENST00000578995 TRBV6-8A0A0A6YYG3 113 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 IGHV3-38A0A0C4DH36 116 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 TRBV27A0A0K0K1C4 114 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 NBDYA0A0U1RRE5 68 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 A0A1B0GVY2 172 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 A0A1B0GW15 77 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 PRSS47A8MTI9 375 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 PHOX2AO14813 284 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 NCR2O95944 276 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 TSHBP01222 138 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 NPYP01303 97 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 APOC3P02656 99 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 MGPP08493 103 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 ESDP10768 282 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 RPL32P62910 135 aaKnown RBP2.54□□□□□ -2
SMARCE1-215ENST00000578995 HBBP68871 147 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 RIGQ13278 110 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 ELOBQ15370 118 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 IQCJQ1A5X6 159 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 LINC01556Q5JQF7 62 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 KRTAP26-1Q6PEX3 210 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 SH2D6Q7Z4S9 175 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 NIT1Q86X76 327 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 MRAP2Q96G30 205 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 BTF3L4Q96K17 158 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 PRADC1Q9BSG0 188 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 TMEM70Q9BUB7 260 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 CHCHD7Q9BUK0 85 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 GTSF1LQ9H1H1 148 aa2.54□□□□□ -2
SMARCE1-215ENST00000578995 TGIF2-C20orf24A0A0A6YYL0 155 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 GAGE12HA6NDE8 117 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 SDHAF1A6NFY7 115 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 F5H697 171 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 SIVA1O15304 175 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 CAMPP49913 170 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 CCL18P55774 89 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 RPL36AP83881 106 aaKnown RBP2.53□□□□□ -2
SMARCE1-215ENST00000578995 NDUFA5Q16718 116 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 DAZ4Q86SG3 579 aaKnown RBP2.53□□□□□ -2
SMARCE1-215ENST00000578995 CBLN2Q8IUK8 224 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 SVBPQ8N300 66 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 RPL36ALQ969Q0 106 aaKnown RBP2.53□□□□□ -2
SMARCE1-215ENST00000578995 URB1-AS1Q96HZ7 61 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 Q9H8V8 135 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 DAZ3Q9NR90 486 aaKnown RBP2.53□□□□□ -2
SMARCE1-215ENST00000578995 HSPG2P98160 4391 aa2.53□□□□□ -2
SMARCE1-215ENST00000578995 RYR1P21817 5038 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 LINC01546A6NGU7 62 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 COLCA2A8K830 154 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 IBA57-AS1B1ANH7 110 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 D6R8Y8 96 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 H7C1H1 209 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 SNAPINO95295 136 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 TNFRSF6BO95407 300 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 SMIM17P0DL12 118 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 SUMO2P61956 95 aaKnown RBP2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 MPV17L2Q567V2 206 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 OR10J3Q5JRS4 329 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 UBE2DNLQ8IWF7 75 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 MAPKAPK5-AS1Q8N8E1 139 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 C20orf203Q8NBC4 194 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 DEFB104AQ8WTQ1 72 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 BORCS7Q96B45 105 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 C20orf78Q9BR46 151 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 ALKBH7Q9BT30 221 aaPredicted RBP2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 SMIM2Q9BVW6 85 aa2.52□□□□□ -2.01
SMARCE1-215ENST00000578995 GNB1LQ9BYB4 327 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms