RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 MRAP2Q96G30 205 aa9.6□□□□□ -0.87
MKS1-207ENST00000578789 A0A1B0GW15 77 aa9.59□□□□□ -0.87
MKS1-207ENST00000578789 NCR2O95944 276 aa9.59□□□□□ -0.87
MKS1-207ENST00000578789 ANGP03950 147 aaKnown RBP9.59□□□□□ -0.87
MKS1-207ENST00000578789 AMTP48728 403 aa9.59□□□□□ -0.87
MKS1-207ENST00000578789 ENHOQ6UWT2 76 aa9.59□□□□□ -0.87
MKS1-207ENST00000578789 Q8N814 137 aa9.59□□□□□ -0.87
MKS1-207ENST00000578789 PRR34Q9NV39 138 aa9.59□□□□□ -0.87
MKS1-207ENST00000578789 SDHAF1A6NFY7 115 aa9.58□□□□□ -0.88
MKS1-207ENST00000578789 PPP1R2P9O14990 202 aa9.58□□□□□ -0.88
MKS1-207ENST00000578789 CDK2AP2O75956 126 aa9.58□□□□□ -0.88
MKS1-207ENST00000578789 GAS8-AS1O95177 125 aa9.58□□□□□ -0.88
MKS1-207ENST00000578789 CRPP02741 224 aa9.58□□□□□ -0.88
MKS1-207ENST00000578789 UQCC3Q6UW78 93 aa9.58□□□□□ -0.88
MKS1-207ENST00000578789 MAPKAPK5-AS1Q8N8E1 139 aa9.58□□□□□ -0.88
MKS1-207ENST00000578789 NTN5Q8WTR8 489 aaPredicted RBP9.58□□□□□ -0.88
MKS1-207ENST00000578789 IGKV2D-24A0A075B6R9 120 aa9.57□□□□□ -0.88
MKS1-207ENST00000578789 A0A1B0GUV1 79 aa9.57□□□□□ -0.88
MKS1-207ENST00000578789 A0A1B0GXF2 115 aa9.57□□□□□ -0.88
MKS1-207ENST00000578789 FUSP35637 526 aaKnown RBP eCLIP9.57□□□□□ -0.88
MKS1-207ENST00000578789 RPS10P46783 165 aaKnown RBP9.57□□□□□ -0.88
MKS1-207ENST00000578789 WFDC2Q14508 124 aa9.57□□□□□ -0.88
MKS1-207ENST00000578789 C20orf203Q8NBC4 194 aa9.57□□□□□ -0.88
MKS1-207ENST00000578789 APOBP04114 4563 aaKnown RBP9.56□□□□□ -0.88
MKS1-207ENST00000578789 MIAQ16674 131 aa9.56□□□□□ -0.88
MKS1-207ENST00000578789 LCE2AQ5TA79 106 aaPredicted RBP9.56□□□□□ -0.88
MKS1-207ENST00000578789 FAM104BQ5XKR9 115 aa9.56□□□□□ -0.88
MKS1-207ENST00000578789 DEFB104AQ8WTQ1 72 aa9.56□□□□□ -0.88
MKS1-207ENST00000578789 TMEM70Q9BUB7 260 aa9.56□□□□□ -0.88
MKS1-207ENST00000578789 C1orf43Q9BWL3 253 aa9.56□□□□□ -0.88
MKS1-207ENST00000578789 ST20Q9HBF5 79 aa9.56□□□□□ -0.88
MKS1-207ENST00000578789 I3L3M4 83 aa9.55□□□□□ -0.88
MKS1-207ENST00000578789 UBE2L6O14933 153 aa9.55□□□□□ -0.88
MKS1-207ENST00000578789 APCSP02743 223 aa9.55□□□□□ -0.88
MKS1-207ENST00000578789 S100A8P05109 93 aa9.55□□□□□ -0.88
MKS1-207ENST00000578789 ADCYAP1P18509 176 aa9.55□□□□□ -0.88
MKS1-207ENST00000578789 POLR2KP53803 58 aaKnown RBP9.55□□□□□ -0.88
MKS1-207ENST00000578789 HBBP68871 147 aa9.55□□□□□ -0.88
MKS1-207ENST00000578789 MRPL54Q6P161 138 aaKnown RBP9.55□□□□□ -0.88
MKS1-207ENST00000578789 ANAPC16Q96DE5 110 aa9.55□□□□□ -0.88
MKS1-207ENST00000578789 IGLV4-60A0A075B6I1 120 aa9.54□□□□□ -0.88
MKS1-207ENST00000578789 TRBV27A0A0K0K1C4 114 aa9.54□□□□□ -0.88
MKS1-207ENST00000578789 SMKR1H3BMG3 65 aa9.54□□□□□ -0.88
MKS1-207ENST00000578789 H7C423 109 aa9.54□□□□□ -0.88
MKS1-207ENST00000578789 PPP1R17O96001 155 aa9.54□□□□□ -0.88
MKS1-207ENST00000578789 MT-ND4LP03901 98 aa9.54□□□□□ -0.88
MKS1-207ENST00000578789 PMCHP20382 165 aa9.54□□□□□ -0.88
MKS1-207ENST00000578789 CAMPP49913 170 aa9.54□□□□□ -0.88
MKS1-207ENST00000578789 MRPL51Q4U2R6 128 aaKnown RBP9.54□□□□□ -0.88
MKS1-207ENST00000578789 ATP5L2Q7Z4Y8 100 aa9.54□□□□□ -0.88
MKS1-207ENST00000578789 LINC00269Q8N2A0 174 aa9.54□□□□□ -0.88
MKS1-207ENST00000578789 NRACQ8N912 160 aa9.54□□□□□ -0.88
MKS1-207ENST00000578789 BAALCQ8WXS3 180 aa9.54□□□□□ -0.88
MKS1-207ENST00000578789 IGLV5-52A0A0A0MRZ9 124 aa9.53□□□□□ -0.88
MKS1-207ENST00000578789 TMEM218A2RU14 115 aa9.53□□□□□ -0.88
MKS1-207ENST00000578789 TSHBP01222 138 aa9.53□□□□□ -0.88
MKS1-207ENST00000578789 REG3AQ06141 175 aa9.53□□□□□ -0.88
MKS1-207ENST00000578789 CLPSL2Q6UWE3 100 aa9.53□□□□□ -0.88
MKS1-207ENST00000578789 HSPG2P98160 4391 aa9.53□□□□□ -0.88
MKS1-207ENST00000578789 LINC00862A6NCI5 91 aa9.52□□□□□ -0.89
MKS1-207ENST00000578789 F8W036 122 aa9.52□□□□□ -0.89
MKS1-207ENST00000578789 LECT2O14960 151 aa9.52□□□□□ -0.89
MKS1-207ENST00000578789 ESDP10768 282 aa9.52□□□□□ -0.89
MKS1-207ENST00000578789 KRTAP10-1P60331 282 aa9.52□□□□□ -0.89
MKS1-207ENST00000578789 KRTAP26-1Q6PEX3 210 aa9.52□□□□□ -0.89
MKS1-207ENST00000578789 TMEM242Q9NWH2 141 aa9.52□□□□□ -0.89
MKS1-207ENST00000578789 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.51□□□□□ -0.89
MKS1-207ENST00000578789 IGKV2-29A2NJV5 120 aaPredicted RBP9.51□□□□□ -0.89
MKS1-207ENST00000578789 GCSHP23434 173 aa9.51□□□□□ -0.89
MKS1-207ENST00000578789 SUMO2P61956 95 aaKnown RBP9.51□□□□□ -0.89
MKS1-207ENST00000578789 COMMD7Q86VX2 200 aa9.51□□□□□ -0.89
MKS1-207ENST00000578789 TRBV24-1A0A075B6N3 115 aa9.5□□□□□ -0.89
MKS1-207ENST00000578789 TRAV8-4A0A0B4J246 113 aa9.5□□□□□ -0.89
MKS1-207ENST00000578789 VCYO14598 125 aa9.5□□□□□ -0.89
MKS1-207ENST00000578789 FGF6P10767 208 aa9.5□□□□□ -0.89
MKS1-207ENST00000578789 RPL32P62910 135 aaKnown RBP9.5□□□□□ -0.89
MKS1-207ENST00000578789 HLA-DQA1P01909 254 aa9.49□□□□□ -0.89
MKS1-207ENST00000578789 ZNF25P17030 456 aaPredicted RBP9.49□□□□□ -0.89
MKS1-207ENST00000578789 CKS2P33552 79 aa9.49□□□□□ -0.89
MKS1-207ENST00000578789 C14orf177Q52M58 125 aa9.49□□□□□ -0.89
MKS1-207ENST00000578789 AMMECR1LQ6DCA0 310 aa9.49□□□□□ -0.89
MKS1-207ENST00000578789 C20orf78Q9BR46 151 aa9.49□□□□□ -0.89
MKS1-207ENST00000578789 SEC11CQ9BY50 192 aa9.49□□□□□ -0.89
MKS1-207ENST00000578789 C7orf77A4D0Y5 90 aa9.48□□□□□ -0.89
MKS1-207ENST00000578789 D6R8Y8 96 aa9.48□□□□□ -0.89
MKS1-207ENST00000578789 PHOX2AO14813 284 aa9.48□□□□□ -0.89
MKS1-207ENST00000578789 PPBPP02775 128 aa9.48□□□□□ -0.89
MKS1-207ENST00000578789 IMMP2LQ96T52 175 aa9.48□□□□□ -0.89
MKS1-207ENST00000578789 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.47□□□□□ -0.89
MKS1-207ENST00000578789 USP17L23D6RBM5 183 aa9.47□□□□□ -0.89
MKS1-207ENST00000578789 TNFRSF6BO95407 300 aa9.47□□□□□ -0.89
MKS1-207ENST00000578789 RNASEKQ6P5S7 137 aaKnown RBP9.47□□□□□ -0.89
MKS1-207ENST00000578789 MRPL52Q86TS9 123 aaKnown RBP9.47□□□□□ -0.89
MKS1-207ENST00000578789 BTF3L4Q96K17 158 aa9.47□□□□□ -0.89
MKS1-207ENST00000578789 KIR2DL4Q99706 377 aa9.47□□□□□ -0.89
MKS1-207ENST00000578789 CTDSP1Q9GZU7 261 aa9.47□□□□□ -0.89
MKS1-207ENST00000578789 IGLV10-54A0A075B6I4 117 aa9.46□□□□□ -0.9
MKS1-207ENST00000578789 NPYP01303 97 aa9.46□□□□□ -0.9
MKS1-207ENST00000578789 FCER1GP30273 86 aa9.46□□□□□ -0.9
MKS1-207ENST00000578789 C10orf91Q5T1B1 145 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms