RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 BORCS7-ASMTA0A0B4J1R7 106 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 IGKV3OR2-268A0A0C4DH90 116 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 UBE2L6O14933 153 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 NDUFS6O75380 124 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 LTAP01374 205 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 MGPP08493 103 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 RPS10P46783 165 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 PRR3P79522 188 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 ZNF726P1Q15940 193 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 IQCJQ1A5X6 159 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 HIGD2BQ4VC39 106 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 AKR1C8PQ5T2L2 129 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 SPINK6Q6UWN8 80 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 C20orf203Q8NBC4 194 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 PRSS3P2Q8NHM4 247 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 AQP10Q96PS8 301 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 VAX2Q9UIW0 290 aa4.3□□□□□ -1.72
SMARCE1-212ENST00000577721 GAGE12HA6NDE8 117 aa4.29□□□□□ -1.72
SMARCE1-212ENST00000577721 NKX2-5P52952 324 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1-212ENST00000577721 DEFA1P59665 94 aa4.29□□□□□ -1.72
SMARCE1-212ENST00000577721 KRTAP10-8P60410 259 aa4.29□□□□□ -1.72
SMARCE1-212ENST00000577721 IFITM3Q01628 133 aa4.29□□□□□ -1.72
SMARCE1-212ENST00000577721 RPL7L1Q6DKI1 246 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-212ENST00000577721 INO80EQ8NBZ0 244 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1-212ENST00000577721 AP1S3Q96PC3 154 aa4.29□□□□□ -1.72
SMARCE1-212ENST00000577721 TPPP3Q9BW30 176 aa4.29□□□□□ -1.72
SMARCE1-212ENST00000577721 A0A1B0GUV1 79 aa4.28□□□□□ -1.72
SMARCE1-212ENST00000577721 MAP1LC3B2A6NCE7 125 aa4.28□□□□□ -1.72
SMARCE1-212ENST00000577721 H7C1H1 209 aa4.28□□□□□ -1.72
SMARCE1-212ENST00000577721 SNAI2O43623 268 aa4.28□□□□□ -1.72
SMARCE1-212ENST00000577721 S100A9P06702 114 aaKnown RBP4.28□□□□□ -1.72
SMARCE1-212ENST00000577721 OR5AL1P0C617 328 aa4.28□□□□□ -1.72
SMARCE1-212ENST00000577721 LINC00299Q6ZSB3 139 aa4.28□□□□□ -1.72
SMARCE1-212ENST00000577721 BAGE2Q86Y30 109 aa4.28□□□□□ -1.72
SMARCE1-212ENST00000577721 MAP1LC3BQ9GZQ8 125 aa4.28□□□□□ -1.72
SMARCE1-212ENST00000577721 GFRA4Q9GZZ7 299 aa4.28□□□□□ -1.72
SMARCE1-212ENST00000577721 M0QY20 66 aa4.27□□□□□ -1.73
SMARCE1-212ENST00000577721 PAGE4O60829 102 aa4.27□□□□□ -1.73
SMARCE1-212ENST00000577721 CXCL1P09341 107 aa4.27□□□□□ -1.73
SMARCE1-212ENST00000577721 AMTP48728 403 aa4.27□□□□□ -1.73
SMARCE1-212ENST00000577721 FHITP49789 147 aa4.27□□□□□ -1.73
SMARCE1-212ENST00000577721 COTL1Q14019 142 aa4.27□□□□□ -1.73
SMARCE1-212ENST00000577721 SUMO4Q6EEV6 95 aa4.27□□□□□ -1.73
SMARCE1-212ENST00000577721 C15orf56Q8N910 161 aa4.27□□□□□ -1.73
SMARCE1-212ENST00000577721 TCEAL7Q9BRU2 100 aa4.27□□□□□ -1.73
SMARCE1-212ENST00000577721 MED28Q9H204 178 aa4.27□□□□□ -1.73
SMARCE1-212ENST00000577721 FXYD6-FXYD2A0A087WZ82 144 aa4.26□□□□□ -1.73
SMARCE1-212ENST00000577721 A0A096LNI7 61 aa4.26□□□□□ -1.73
SMARCE1-212ENST00000577721 PFDN1O60925 122 aa4.26□□□□□ -1.73
SMARCE1-212ENST00000577721 Q5BKY6 102 aa4.26□□□□□ -1.73
SMARCE1-212ENST00000577721 AMMECR1LQ6DCA0 310 aa4.26□□□□□ -1.73
SMARCE1-212ENST00000577721 RASL11AQ6T310 242 aa4.26□□□□□ -1.73
SMARCE1-212ENST00000577721 Q6ZRP5 223 aa4.26□□□□□ -1.73
SMARCE1-212ENST00000577721 CHCHD10Q8WYQ3 142 aaPredicted RBP4.26□□□□□ -1.73
SMARCE1-212ENST00000577721 LINC00474Q9P2X8 69 aa4.26□□□□□ -1.73
SMARCE1-212ENST00000577721 PKIGQ9Y2B9 76 aa4.26□□□□□ -1.73
SMARCE1-212ENST00000577721 ALG5Q9Y673 324 aa4.26□□□□□ -1.73
SMARCE1-212ENST00000577721 RNF213Q63HN8 5207 aa4.26□□□□□ -1.73
SMARCE1-212ENST00000577721 A0A1B0GV50 99 aa4.25□□□□□ -1.73
SMARCE1-212ENST00000577721 FAM231BA6NCW3 169 aa4.25□□□□□ -1.73
SMARCE1-212ENST00000577721 CACNG7P62955 275 aa4.25□□□□□ -1.73
SMARCE1-212ENST00000577721 SRSF9Q13242 221 aaKnown RBP eCLIP4.25□□□□□ -1.73
SMARCE1-212ENST00000577721 RNASEKQ6P5S7 137 aaKnown RBP4.25□□□□□ -1.73
SMARCE1-212ENST00000577721 TMUB2Q71RG4 321 aa4.25□□□□□ -1.73
SMARCE1-212ENST00000577721 FER1L6-AS1Q8NA97 138 aa4.25□□□□□ -1.73
SMARCE1-212ENST00000577721 SFT2D1Q8WV19 159 aa4.25□□□□□ -1.73
SMARCE1-212ENST00000577721 NIT2Q9NQR4 276 aa4.25□□□□□ -1.73
SMARCE1-212ENST00000577721 LRP2P98164 4655 aa4.25□□□□□ -1.73
SMARCE1-212ENST00000577721 TRGC1P0CF51 173 aa4.24□□□□□ -1.73
SMARCE1-212ENST00000577721 RPS20P60866 119 aaKnown RBP4.24□□□□□ -1.73
SMARCE1-212ENST00000577721 OR2D3Q8NGH3 330 aa4.24□□□□□ -1.73
SMARCE1-212ENST00000577721 LINC00526Q96FQ7 95 aa4.24□□□□□ -1.73
SMARCE1-212ENST00000577721 PGLYRP4Q96LB8 373 aa4.24□□□□□ -1.73
SMARCE1-212ENST00000577721 MLST8Q9BVC4 326 aa4.24□□□□□ -1.73
SMARCE1-212ENST00000577721 TNXBP22105 4242 aa4.23□□□□□ -1.73
SMARCE1-212ENST00000577721 GVQW2A0A096LPI5 108 aaPredicted RBP4.23□□□□□ -1.73
SMARCE1-212ENST00000577721 XKRY2A2RUG3 117 aa4.23□□□□□ -1.73
SMARCE1-212ENST00000577721 ZNF561-AS1K7EIQ3 104 aa4.23□□□□□ -1.73
SMARCE1-212ENST00000577721 MT-ND6P03923 174 aa4.23□□□□□ -1.73
SMARCE1-212ENST00000577721 GIPP09681 153 aaPredicted RBP4.23□□□□□ -1.73
SMARCE1-212ENST00000577721 XCL1P47992 114 aa4.23□□□□□ -1.73
SMARCE1-212ENST00000577721 GAGE2BQ13066 116 aa4.23□□□□□ -1.73
SMARCE1-212ENST00000577721 KCNRGQ8N5I3 272 aa4.23□□□□□ -1.73
SMARCE1-212ENST00000577721 FAM213BQ8TBF2 198 aa4.23□□□□□ -1.73
SMARCE1-212ENST00000577721 CARD19Q96LW7 228 aa4.23□□□□□ -1.73
SMARCE1-212ENST00000577721 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 TRAV26-2A0A0B4J265 109 aa4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 IGHV1-58A0A0C4DH39 117 aa4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 IGKV2-29A2NJV5 120 aaPredicted RBP4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 F2Z2F3 143 aa4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 IFNA1P01562 189 aa4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 NTF3P20783 257 aa4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 RPL35P42766 123 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 SYCNQ0VAF6 134 aa4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 FOXI1Q12951 378 aa4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 TWIST1Q15672 202 aa4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 LYZL1Q6UWQ5 148 aa4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 ZNF664Q8N3J9 261 aa4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 TMEM101Q96IK0 257 aa4.22□□□□□ -1.73
SMARCE1-212ENST00000577721 BTF3L4Q96K17 158 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms