RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 SNX29P2Q8IUI4 249 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 USMG5Q96IX5 58 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 SLC35B3Q9H1N7 401 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 RPRMQ9NS64 109 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 CBLN4Q9NTU7 201 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 ARL2BPQ9Y2Y0 163 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 NOP16Q9Y3C1 178 aaKnown RBP-0.9□□□□□ -2.55
CDH8-204ENST00000577536 R4GMQ9 66 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 PTPN23Q9H3S7 1636 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 LRRK2Q5S007 2527 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 COL12A1Q99715 3063 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 A2MP01023 1474 aa-0.91□□□□□ -2.55
CDH8-204ENST00000577536 POLA1P09884 1462 aaPredicted RBP-0.91□□□□□ -2.55
CDH8-204ENST00000577536 SACSQ9NZJ4 4579 aa-0.91□□□□□ -2.55
CDH8-204ENST00000577536 MTORP42345 2549 aa-0.91□□□□□ -2.55
CDH8-204ENST00000577536 UTP20O75691 2785 aaKnown RBP-0.91□□□□□ -2.56
CDH8-204ENST00000577536 REV3LO60673 3130 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 BORCS7-ASMTA0A0B4J1R7 106 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 TRBV7-4A0A0J9YYF1 115 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 CTXND1A0A1B0GTU2 59 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 C9orf92A6NGG3 77 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 IFNA17P01571 189 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 HSD11B1P28845 292 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 PSPHP78330 225 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 COX17Q14061 63 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 C9orf116Q5BN46 136 aaPredicted RBP-0.91□□□□□ -2.56
CDH8-204ENST00000577536 ZNF818PQ6ZRF7 136 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 OR13C6PQ8NH95 151 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 LRRC37A3O60309 1634 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 TRANK1O15050 2925 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 APOBP04114 4563 aaKnown RBP-0.91□□□□□ -2.56
CDH8-204ENST00000577536 COL4A6Q14031 1691 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 RELNP78509 3460 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 ADAMTS12P58397 1594 aa-0.91□□□□□ -2.56
CDH8-204ENST00000577536 TRIOO75962 3097 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 CCDC168Q8NDH2 2452 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 FER1L6Q2WGJ9 1857 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 A6NIN4 97 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 J3QLW9 94 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 M0QZK8 103 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 PITX3O75364 302 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 PPP1R17O96001 155 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 IFNA1P01562 189 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 RBP4P02753 201 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 TCRAP04437 139 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 SCIMPQ6UWF3 145 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 TMED4Q7Z7H5 227 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 FAM24BQ8N5W8 94 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 DYDC1Q8WWB3 177 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 GINS3Q9BRX5 216 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 NAA60Q9H7X0 242 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 SS18L2Q9UHA2 77 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 NDUFA12Q9UI09 145 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 DNAJC15Q9Y5T4 150 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 CMYA5Q8N3K9 4069 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 FRYQ5TBA9 3013 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 FAM186AA6NE01 2351 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 SHANK2Q9UPX8 1470 aa-0.92□□□□□ -2.56
CDH8-204ENST00000577536 SLIT1O75093 1534 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 NBEAL2Q6ZNJ1 2754 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 GCN1Q92616 2671 aaKnown RBP-0.93□□□□□ -2.56
CDH8-204ENST00000577536 F8VRH5 84 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 SSSCA1O60232 199 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 NIPSNAP2O75323 286 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 FAM107AO95990 144 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 RGS21Q2M5E4 152 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 SPANXN1Q5VSR9 72 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 LINC01545Q5VT33 79 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 RPL7L1Q6DKI1 246 aaKnown RBP-0.93□□□□□ -2.56
CDH8-204ENST00000577536 VSTM2AQ8TAG5 236 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 C10orf82Q8WW14 230 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 AMELXQ99217 191 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 CCDC32Q9BV29 185 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 NDUFA4L2Q9NRX3 87 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 MED31Q9Y3C7 131 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 LINC00312Q9Y6C7 94 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 MYOM3Q5VTT5 1437 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 DYNC1H1Q14204 4646 aaKnown RBP-0.93□□□□□ -2.56
CDH8-204ENST00000577536 PLB1Q6P1J6 1458 aa-0.93□□□□□ -2.56
CDH8-204ENST00000577536 SBF2Q86WG5 1849 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 TULP4Q9NRJ4 1543 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 ADCY9O60503 1353 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 PCF11O94913 1555 aaKnown RBP-0.94□□□□□ -2.56
CDH8-204ENST00000577536 SETBP1Q9Y6X0 1596 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 YTHDC2Q9H6S0 1430 aaKnown RBP-0.94□□□□□ -2.56
CDH8-204ENST00000577536 E7EQ34 232 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 K7EP34 96 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 UQCR11O14957 56 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 ARPC5O15511 151 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 PFDN1O60925 122 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 SMIM24O75264 130 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 HLA-DRB4P13762 266 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 S100A5P33763 92 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 TCTAP57738 103 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 UBE2G1P62253 170 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 Q6AWC8 147 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 PTRHD1Q6GMV3 140 aaKnown RBP-0.94□□□□□ -2.56
CDH8-204ENST00000577536 DCUN1D2Q6PH85 259 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 DHRS4L2Q6PKH6 230 aa-0.94□□□□□ -2.56
CDH8-204ENST00000577536 HRCT1Q6UXD1 115 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms