RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 TWIST1Q15672 202 aa9.67□□□□□ -0.86
MKS1-205ENST00000577315 SMIM15Q7Z3B0 74 aa9.67□□□□□ -0.86
MKS1-205ENST00000577315 TMEM250H0YL14 139 aa9.66□□□□□ -0.86
MKS1-205ENST00000577315 OCC1Q8TAD7 63 aa9.66□□□□□ -0.86
MKS1-205ENST00000577315 AMTP48728 403 aa9.65□□□□□ -0.86
MKS1-205ENST00000577315 TEX261Q6UWH6 196 aa9.65□□□□□ -0.86
MKS1-205ENST00000577315 RNASE7Q9H1E1 156 aaKnown RBP9.65□□□□□ -0.86
MKS1-205ENST00000577315 IGLV4-60A0A075B6I1 120 aa9.64□□□□□ -0.87
MKS1-205ENST00000577315 IGLV10-54A0A075B6I4 117 aa9.64□□□□□ -0.87
MKS1-205ENST00000577315 NCR2O95944 276 aa9.64□□□□□ -0.87
MKS1-205ENST00000577315 CNBPP62633 177 aaKnown RBP9.64□□□□□ -0.87
MKS1-205ENST00000577315 AP5S1Q9NUS5 200 aa9.64□□□□□ -0.87
MKS1-205ENST00000577315 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.63□□□□□ -0.87
MKS1-205ENST00000577315 A8MWL6 223 aa9.63□□□□□ -0.87
MKS1-205ENST00000577315 K7EN84 100 aa9.63□□□□□ -0.87
MKS1-205ENST00000577315 GATCO43716 136 aaKnown RBP9.63□□□□□ -0.87
MKS1-205ENST00000577315 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
MKS1-205ENST00000577315 Q6ZNX1 250 aa9.63□□□□□ -0.87
MKS1-205ENST00000577315 FAM231DQ6ZW35 169 aa9.63□□□□□ -0.87
MKS1-205ENST00000577315 AKAP14Q86UN6 197 aa9.63□□□□□ -0.87
MKS1-205ENST00000577315 GATD1Q8NB37 220 aa9.63□□□□□ -0.87
MKS1-205ENST00000577315 hDV102S1A0JD36 115 aa9.62□□□□□ -0.87
MKS1-205ENST00000577315 H7C423 109 aa9.62□□□□□ -0.87
MKS1-205ENST00000577315 OXTP01178 125 aa9.62□□□□□ -0.87
MKS1-205ENST00000577315 RPL37AP61513 92 aaKnown RBP9.62□□□□□ -0.87
MKS1-205ENST00000577315 CFAP161Q6P656 301 aa9.62□□□□□ -0.87
MKS1-205ENST00000577315 NDUFS6O75380 124 aaKnown RBP9.61□□□□□ -0.87
MKS1-205ENST00000577315 CT83Q5H943 113 aa9.61□□□□□ -0.87
MKS1-205ENST00000577315 AMMECR1LQ6DCA0 310 aa9.61□□□□□ -0.87
MKS1-205ENST00000577315 SDIM1Q6ZPB5 146 aa9.61□□□□□ -0.87
MKS1-205ENST00000577315 LYPD6BQ8NI32 183 aa9.61□□□□□ -0.87
MKS1-205ENST00000577315 BORCS7Q96B45 105 aa9.61□□□□□ -0.87
MKS1-205ENST00000577315 FAM210AQ96ND0 272 aa9.61□□□□□ -0.87
MKS1-205ENST00000577315 IGHV3-64A0A075B6Q5 118 aa9.6□□□□□ -0.87
MKS1-205ENST00000577315 APCSP02743 223 aa9.6□□□□□ -0.87
MKS1-205ENST00000577315 FOXA3P55318 350 aaPredicted RBP9.6□□□□□ -0.87
MKS1-205ENST00000577315 ALKAL2Q6UX46 152 aa9.6□□□□□ -0.87
MKS1-205ENST00000577315 GTSF1Q8WW33 167 aa9.6□□□□□ -0.87
MKS1-205ENST00000577315 GFRA4Q9GZZ7 299 aa9.6□□□□□ -0.87
MKS1-205ENST00000577315 TRAV26-2A0A0B4J265 109 aa9.59□□□□□ -0.87
MKS1-205ENST00000577315 SDHAF1A6NFY7 115 aa9.58□□□□□ -0.88
MKS1-205ENST00000577315 CIRBPQ14011 172 aaKnown RBP9.58□□□□□ -0.88
MKS1-205ENST00000577315 RPL39LQ96EH5 51 aaKnown RBP9.58□□□□□ -0.88
MKS1-205ENST00000577315 RNF185Q96GF1 192 aa9.58□□□□□ -0.88
MKS1-205ENST00000577315 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.58□□□□□ -0.88
MKS1-205ENST00000577315 TRBV6-5A0A0K0K1A5 114 aa9.57□□□□□ -0.88
MKS1-205ENST00000577315 ZNF25P17030 456 aaPredicted RBP9.57□□□□□ -0.88
MKS1-205ENST00000577315 RNASEKQ6P5S7 137 aaKnown RBP9.57□□□□□ -0.88
MKS1-205ENST00000577315 FAM231BA6NCW3 169 aa9.56□□□□□ -0.88
MKS1-205ENST00000577315 GAGE12HA6NDE8 117 aa9.56□□□□□ -0.88
MKS1-205ENST00000577315 I3L3M4 83 aa9.56□□□□□ -0.88
MKS1-205ENST00000577315 PMCHP20382 165 aa9.56□□□□□ -0.88
MKS1-205ENST00000577315 CEBPGP53567 150 aa9.56□□□□□ -0.88
MKS1-205ENST00000577315 SERTAD4-AS1Q5TG53 156 aa9.56□□□□□ -0.88
MKS1-205ENST00000577315 BTF3L4Q96K17 158 aa9.56□□□□□ -0.88
MKS1-205ENST00000577315 SMIM7Q9BQ49 75 aa9.56□□□□□ -0.88
MKS1-205ENST00000577315 EIF5A2Q9GZV4 153 aaKnown RBP9.56□□□□□ -0.88
MKS1-205ENST00000577315 IGKV3OR2-268A0A0C4DH90 116 aa9.55□□□□□ -0.88
MKS1-205ENST00000577315 A0A1B0GUT8 65 aa9.55□□□□□ -0.88
MKS1-205ENST00000577315 FGF6P10767 208 aa9.55□□□□□ -0.88
MKS1-205ENST00000577315 TSKUQ8WUA8 353 aa9.55□□□□□ -0.88
MKS1-205ENST00000577315 CHCHD10Q8WYQ3 142 aaPredicted RBP9.55□□□□□ -0.88
MKS1-205ENST00000577315 DPH3Q96FX2 82 aa9.55□□□□□ -0.88
MKS1-205ENST00000577315 TMEM101Q96IK0 257 aa9.55□□□□□ -0.88
MKS1-205ENST00000577315 TMEM191AQ9H0A3 160 aa9.55□□□□□ -0.88
MKS1-205ENST00000577315 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.54□□□□□ -0.88
MKS1-205ENST00000577315 IGKV2-29A2NJV5 120 aaPredicted RBP9.54□□□□□ -0.88
MKS1-205ENST00000577315 PANO1I0J062 215 aa9.54□□□□□ -0.88
MKS1-205ENST00000577315 RPS10P46783 165 aaKnown RBP9.54□□□□□ -0.88
MKS1-205ENST00000577315 LINC01551Q86U37 167 aa9.54□□□□□ -0.88
MKS1-205ENST00000577315 C15orf56Q8N910 161 aa9.54□□□□□ -0.88
MKS1-205ENST00000577315 OR5A1Q8NGJ0 315 aa9.54□□□□□ -0.88
MKS1-205ENST00000577315 ST20Q9HBF5 79 aa9.54□□□□□ -0.88
MKS1-205ENST00000577315 OSTCQ9NRP0 149 aa9.54□□□□□ -0.88
MKS1-205ENST00000577315 LRP1Q07954 4544 aaKnown RBP9.53□□□□□ -0.88
MKS1-205ENST00000577315 hCG_2014768A0A024R1R8 64 aa9.53□□□□□ -0.88
MKS1-205ENST00000577315 ZNF727A8MUV8 499 aa9.53□□□□□ -0.88
MKS1-205ENST00000577315 HIGD1CA8MV81 97 aa9.53□□□□□ -0.88
MKS1-205ENST00000577315 SLPIP03973 132 aa9.53□□□□□ -0.88
MKS1-205ENST00000577315 MRAP2Q96G30 205 aa9.53□□□□□ -0.88
MKS1-205ENST00000577315 ESDP10768 282 aa9.52□□□□□ -0.89
MKS1-205ENST00000577315 SPACA4Q8TDM5 124 aa9.52□□□□□ -0.89
MKS1-205ENST00000577315 PKIGQ9Y2B9 76 aa9.52□□□□□ -0.89
MKS1-205ENST00000577315 FAT3Q8TDW7 4589 aa9.51□□□□□ -0.89
MKS1-205ENST00000577315 A0A087WYN8 130 aa9.51□□□□□ -0.89
MKS1-205ENST00000577315 PPP1R17O96001 155 aa9.51□□□□□ -0.89
MKS1-205ENST00000577315 GVQW2A0A096LPI5 108 aaPredicted RBP9.5□□□□□ -0.89
MKS1-205ENST00000577315 TRBV27A0A0K0K1C4 114 aa9.5□□□□□ -0.89
MKS1-205ENST00000577315 SRP19P09132 144 aaKnown RBP9.5□□□□□ -0.89
MKS1-205ENST00000577315 RAB4AP20338 218 aa9.5□□□□□ -0.89
MKS1-205ENST00000577315 POLR2KP53803 58 aaKnown RBP9.5□□□□□ -0.89
MKS1-205ENST00000577315 SMAGPQ0VAQ4 97 aa9.5□□□□□ -0.89
MKS1-205ENST00000577315 RIGQ13278 110 aa9.5□□□□□ -0.89
MKS1-205ENST00000577315 HIGD2BQ4VC39 106 aa9.5□□□□□ -0.89
MKS1-205ENST00000577315 FAM74A3Q4VXF1 159 aa9.5□□□□□ -0.89
MKS1-205ENST00000577315 Q6ZRU5 148 aa9.5□□□□□ -0.89
MKS1-205ENST00000577315 PKHD1L1Q86WI1 4243 aa9.49□□□□□ -0.89
MKS1-205ENST00000577315 LINC00959A0A1B0GUT2 108 aa9.49□□□□□ -0.89
MKS1-205ENST00000577315 TSHBP01222 138 aa9.49□□□□□ -0.89
MKS1-205ENST00000577315 FOXI1Q12951 378 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms