RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 J3QQQ9 107 aa10.21□□□□□ -0.77
RAB40B-211ENST00000576359 VCX2Q9H322 139 aa10.21□□□□□ -0.77
RAB40B-211ENST00000576359 ITPR2Q14571 2701 aa10.21□□□□□ -0.78
RAB40B-211ENST00000576359 LINC01006Q8NI28 216 aa10.21□□□□□ -0.78
RAB40B-211ENST00000576359 TNFRSF18Q9Y5U5 241 aa10.21□□□□□ -0.78
RAB40B-211ENST00000576359 KMT2BQ9UMN6 2715 aaPredicted RBP10.2□□□□□ -0.78
RAB40B-211ENST00000576359 AMELXQ99217 191 aa10.2□□□□□ -0.78
RAB40B-211ENST00000576359 LINC00467Q9BRT7 94 aa10.2□□□□□ -0.78
RAB40B-211ENST00000576359 NIPBLQ6KC79 2804 aaeCLIP10.2□□□□□ -0.78
RAB40B-211ENST00000576359 A0A0J9YXV3 536 aa10.2□□□□□ -0.78
RAB40B-211ENST00000576359 TMEM223A0PJW6 202 aa10.2□□□□□ -0.78
RAB40B-211ENST00000576359 H3BMG7 143 aa10.2□□□□□ -0.78
RAB40B-211ENST00000576359 J3QKU1 62 aa10.2□□□□□ -0.78
RAB40B-211ENST00000576359 INSP01308 110 aa10.2□□□□□ -0.78
RAB40B-211ENST00000576359 LGALS3P17931 250 aaKnown RBP10.2□□□□□ -0.78
RAB40B-211ENST00000576359 UBE2D1P51668 147 aa10.2□□□□□ -0.78
RAB40B-211ENST00000576359 PIK3CD-AS1Q5SR53 167 aa10.2□□□□□ -0.78
RAB40B-211ENST00000576359 CFAP126Q5VTH2 177 aa10.2□□□□□ -0.78
RAB40B-211ENST00000576359 PGPEP1Q9NXJ5 209 aa10.2□□□□□ -0.78
RAB40B-211ENST00000576359 ACANP16112 2415 aa10.19□□□□□ -0.78
RAB40B-211ENST00000576359 TRAV25A0A0B4J276 109 aa10.19□□□□□ -0.78
RAB40B-211ENST00000576359 SCGB1A1P11684 91 aa10.19□□□□□ -0.78
RAB40B-211ENST00000576359 ZNF22P17026 224 aaPredicted RBP10.19□□□□□ -0.78
RAB40B-211ENST00000576359 MRPL16Q9NX20 251 aaKnown RBP10.19□□□□□ -0.78
RAB40B-211ENST00000576359 XCL2Q9UBD3 114 aa10.19□□□□□ -0.78
RAB40B-211ENST00000576359 RNASE1P07998 156 aaKnown RBP10.18□□□□□ -0.78
RAB40B-211ENST00000576359 AZU1P20160 251 aa10.18□□□□□ -0.78
RAB40B-211ENST00000576359 SLC25A29Q8N8R3 303 aa10.18□□□□□ -0.78
RAB40B-211ENST00000576359 PTH2Q96A98 100 aa10.18□□□□□ -0.78
RAB40B-211ENST00000576359 RHODO00212 210 aa10.18□□□□□ -0.78
RAB40B-211ENST00000576359 FAM104AQ969W3 186 aa10.18□□□□□ -0.78
RAB40B-211ENST00000576359 SPANXB1Q9NS25 103 aaPredicted RBP10.18□□□□□ -0.78
RAB40B-211ENST00000576359 PYGO1Q9Y3Y4 419 aa10.18□□□□□ -0.78
RAB40B-211ENST00000576359 IGHV3-64A0A075B6Q5 118 aa10.17□□□□□ -0.78
RAB40B-211ENST00000576359 LEPROTO15243 131 aa10.17□□□□□ -0.78
RAB40B-211ENST00000576359 RPL24P83731 157 aaKnown RBP10.17□□□□□ -0.78
RAB40B-211ENST00000576359 CEMP1Q6PRD7 247 aaPredicted RBP10.17□□□□□ -0.78
RAB40B-211ENST00000576359 C16orf95Q9H693 158 aa10.17□□□□□ -0.78
RAB40B-211ENST00000576359 TSSC4Q9Y5U2 329 aaPredicted RBP10.17□□□□□ -0.78
RAB40B-211ENST00000576359 APOMO95445 188 aa10.17□□□□□ -0.78
RAB40B-211ENST00000576359 IGHV3-30P01768 117 aa10.17□□□□□ -0.78
RAB40B-211ENST00000576359 IGHV3-30-5P0DP03 117 aa10.17□□□□□ -0.78
RAB40B-211ENST00000576359 STHQ8IWL8 128 aa10.17□□□□□ -0.78
RAB40B-211ENST00000576359 C1orf158Q8N1D5 194 aa10.17□□□□□ -0.78
RAB40B-211ENST00000576359 F8W1H4 67 aa10.16□□□□□ -0.78
RAB40B-211ENST00000576359 WFDC2Q14508 124 aa10.16□□□□□ -0.78
RAB40B-211ENST00000576359 BEAN1Q3B7T3 259 aa10.16□□□□□ -0.78
RAB40B-211ENST00000576359 TEX48A0A1B0GUV7 120 aa10.16□□□□□ -0.78
RAB40B-211ENST00000576359 SPXQ9BT56 116 aa10.16□□□□□ -0.78
RAB40B-211ENST00000576359 TSPAN13O95857 204 aa10.15□□□□□ -0.78
RAB40B-211ENST00000576359 IGHV3-53P01767 116 aa10.15□□□□□ -0.78
RAB40B-211ENST00000576359 RNASE13Q5GAN3 156 aaKnown RBP10.15□□□□□ -0.78
RAB40B-211ENST00000576359 CHCHD7Q9BUK0 85 aa10.15□□□□□ -0.78
RAB40B-211ENST00000576359 HELZ2Q9BYK8 2649 aaKnown RBP10.15□□□□□ -0.79
RAB40B-211ENST00000576359 IGHV3OR16-12A0A075B7B8 117 aa10.14□□□□□ -0.79
RAB40B-211ENST00000576359 SMAGPQ0VAQ4 97 aa10.14□□□□□ -0.79
RAB40B-211ENST00000576359 NDUFA11Q86Y39 141 aa10.14□□□□□ -0.79
RAB40B-211ENST00000576359 MTURNQ8N3F0 131 aa10.14□□□□□ -0.79
RAB40B-211ENST00000576359 SFTA2Q6UW10 78 aa10.14□□□□□ -0.79
RAB40B-211ENST00000576359 IL17DQ8TAD2 202 aa10.14□□□□□ -0.79
RAB40B-211ENST00000576359 GTSF1LQ9H1H1 148 aa10.14□□□□□ -0.79
RAB40B-211ENST00000576359 SETD2Q9BYW2 2564 aaPredicted RBP10.14□□□□□ -0.79
RAB40B-211ENST00000576359 IGHV3-38A0A0C4DH36 116 aa10.13□□□□□ -0.79
RAB40B-211ENST00000576359 RS1O15537 224 aa10.13□□□□□ -0.79
RAB40B-211ENST00000576359 CFC1BP0CG36 223 aa10.13□□□□□ -0.79
RAB40B-211ENST00000576359 CFC1P0CG37 223 aa10.13□□□□□ -0.79
RAB40B-211ENST00000576359 MRPS36P82909 103 aaKnown RBP10.13□□□□□ -0.79
RAB40B-211ENST00000576359 GAGE13Q4V321 117 aa10.13□□□□□ -0.79
RAB40B-211ENST00000576359 OXLD1Q5BKU9 147 aa10.13□□□□□ -0.79
RAB40B-211ENST00000576359 UNC79Q9P2D8 2635 aa10.13□□□□□ -0.79
RAB40B-211ENST00000576359 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.13□□□□□ -0.79
RAB40B-211ENST00000576359 IGKV2-29A2NJV5 120 aaPredicted RBP10.13□□□□□ -0.79
RAB40B-211ENST00000576359 ADARB2-AS1A8MUL3 147 aa10.13□□□□□ -0.79
RAB40B-211ENST00000576359 CRYBA4P53673 196 aa10.13□□□□□ -0.79
RAB40B-211ENST00000576359 SMR3AQ99954 134 aa10.13□□□□□ -0.79
RAB40B-211ENST00000576359 SETXQ7Z333 2677 aaKnown RBP10.13□□□□□ -0.79
RAB40B-211ENST00000576359 MTORP42345 2549 aa10.13□□□□□ -0.79
RAB40B-211ENST00000576359 DNAJC30Q96LL9 226 aa10.12□□□□□ -0.79
RAB40B-211ENST00000576359 SIGMAR1Q99720 223 aa10.12□□□□□ -0.79
RAB40B-211ENST00000576359 WFDC10AQ9H1F0 79 aa10.12□□□□□ -0.79
RAB40B-211ENST00000576359 PRO0461Q9UI25 63 aa10.12□□□□□ -0.79
RAB40B-211ENST00000576359 UBE2D4Q9Y2X8 147 aa10.12□□□□□ -0.79
RAB40B-211ENST00000576359 LOC107984156A0A0G2JMH3 177 aa10.12□□□□□ -0.79
RAB40B-211ENST00000576359 ARL17AQ8IVW1 177 aa10.12□□□□□ -0.79
RAB40B-211ENST00000576359 NOTCH3Q9UM47 2321 aa10.12□□□□□ -0.79
RAB40B-211ENST00000576359 IGHV3-30-3P0DP02 117 aa10.11□□□□□ -0.79
RAB40B-211ENST00000576359 HILS1P60008 231 aa10.11□□□□□ -0.79
RAB40B-211ENST00000576359 ETDBQ3ZM63 59 aa10.11□□□□□ -0.79
RAB40B-211ENST00000576359 SH2D6Q7Z4S9 175 aa10.11□□□□□ -0.79
RAB40B-211ENST00000576359 C10orf126Q8N4M7 172 aa10.11□□□□□ -0.79
RAB40B-211ENST00000576359 SPANXA1Q9NS26 97 aa10.11□□□□□ -0.79
RAB40B-211ENST00000576359 TRAV26-1A0A087WT03 109 aa10.11□□□□□ -0.79
RAB40B-211ENST00000576359 GIG44P09565 113 aaPredicted RBP10.11□□□□□ -0.79
RAB40B-211ENST00000576359 TIMM21Q9BVV7 248 aa10.11□□□□□ -0.79
RAB40B-211ENST00000576359 TRAV8-3A0A0A6YYJ7 113 aa10.1□□□□□ -0.79
RAB40B-211ENST00000576359 CKS1BP61024 79 aa10.1□□□□□ -0.79
RAB40B-211ENST00000576359 UBE2D3P61077 147 aa10.1□□□□□ -0.79
RAB40B-211ENST00000576359 UBE2D2P62837 147 aa10.1□□□□□ -0.79
RAB40B-211ENST00000576359 Q6ZUT4 128 aa10.1□□□□□ -0.79
RAB40B-211ENST00000576359 TRGV1A0A0A0MS02 117 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms