RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 C9orf62Q8N4C0 152 aa9.71□□□□□ -0.86
CTNS-209ENST00000574776 SMIM12Q96EX1 92 aa9.71□□□□□ -0.86
CTNS-209ENST00000574776 AP5S1Q9NUS5 200 aa9.71□□□□□ -0.86
CTNS-209ENST00000574776 PLA2G2DQ9UNK4 145 aa9.71□□□□□ -0.86
CTNS-209ENST00000574776 UBR4Q5T4S7 5183 aa9.71□□□□□ -0.86
CTNS-209ENST00000574776 IGHV3-64A0A075B6Q5 118 aa9.7□□□□□ -0.86
CTNS-209ENST00000574776 PDE6DO43924 150 aa9.7□□□□□ -0.86
CTNS-209ENST00000574776 AMTP48728 403 aa9.7□□□□□ -0.86
CTNS-209ENST00000574776 CIRBPQ14011 172 aaKnown RBP9.7□□□□□ -0.86
CTNS-209ENST00000574776 EIF5AL1Q6IS14 154 aaKnown RBP9.7□□□□□ -0.86
CTNS-209ENST00000574776 NUDT10Q8NFP7 164 aa9.7□□□□□ -0.86
CTNS-209ENST00000574776 NUDT11Q96G61 164 aa9.7□□□□□ -0.86
CTNS-209ENST00000574776 PGLYRP4Q96LB8 373 aa9.7□□□□□ -0.86
CTNS-209ENST00000574776 BIN3Q9NQY0 253 aa9.7□□□□□ -0.86
CTNS-209ENST00000574776 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.69□□□□□ -0.86
CTNS-209ENST00000574776 CHTF8P0CG12 524 aa9.69□□□□□ -0.86
CTNS-209ENST00000574776 SULT1A2P50226 295 aa9.69□□□□□ -0.86
CTNS-209ENST00000574776 COTL1Q14019 142 aa9.69□□□□□ -0.86
CTNS-209ENST00000574776 TWIST1Q15672 202 aa9.69□□□□□ -0.86
CTNS-209ENST00000574776 WDR73Q6P4I2 378 aa9.69□□□□□ -0.86
CTNS-209ENST00000574776 GATD1Q8NB37 220 aa9.68□□□□□ -0.86
CTNS-209ENST00000574776 A0A087WYN8 130 aa9.67□□□□□ -0.86
CTNS-209ENST00000574776 TRAV26-2A0A0B4J265 109 aa9.67□□□□□ -0.86
CTNS-209ENST00000574776 IGKV3OR2-268A0A0C4DH90 116 aa9.67□□□□□ -0.86
CTNS-209ENST00000574776 GAGE12HA6NDE8 117 aa9.67□□□□□ -0.86
CTNS-209ENST00000574776 BCL2P10415 239 aa9.67□□□□□ -0.86
CTNS-209ENST00000574776 CTRLP40313 264 aa9.66□□□□□ -0.86
CTNS-209ENST00000574776 RNASE7Q9H1E1 156 aaKnown RBP9.66□□□□□ -0.86
CTNS-209ENST00000574776 MT1HL1P0DM35 61 aa9.65□□□□□ -0.86
CTNS-209ENST00000574776 CFAP161Q6P656 301 aa9.65□□□□□ -0.86
CTNS-209ENST00000574776 Q6ZRU5 148 aa9.65□□□□□ -0.86
CTNS-209ENST00000574776 C15orf56Q8N910 161 aa9.65□□□□□ -0.86
CTNS-209ENST00000574776 OCC1Q8TAD7 63 aa9.65□□□□□ -0.86
CTNS-209ENST00000574776 SPACA4Q8TDM5 124 aa9.65□□□□□ -0.86
CTNS-209ENST00000574776 RNF185Q96GF1 192 aa9.65□□□□□ -0.86
CTNS-209ENST00000574776 CNFNQ9BYD5 112 aa9.65□□□□□ -0.86
CTNS-209ENST00000574776 K7EN84 100 aa9.64□□□□□ -0.87
CTNS-209ENST00000574776 FOXA3P55318 350 aaPredicted RBP9.64□□□□□ -0.87
CTNS-209ENST00000574776 RPL39LQ96EH5 51 aaKnown RBP9.64□□□□□ -0.87
CTNS-209ENST00000574776 RPP21Q9H633 154 aaKnown RBP9.64□□□□□ -0.87
CTNS-209ENST00000574776 RPS10P46783 165 aaKnown RBP9.63□□□□□ -0.87
CTNS-209ENST00000574776 COX6A2Q02221 97 aa9.63□□□□□ -0.87
CTNS-209ENST00000574776 HIGD2BQ4VC39 106 aa9.63□□□□□ -0.87
CTNS-209ENST00000574776 AMMECR1LQ6DCA0 310 aa9.63□□□□□ -0.87
CTNS-209ENST00000574776 RNASEKQ6P5S7 137 aaKnown RBP9.63□□□□□ -0.87
CTNS-209ENST00000574776 Q6ZNX1 250 aa9.63□□□□□ -0.87
CTNS-209ENST00000574776 PLAC8Q9NZF1 115 aa9.63□□□□□ -0.87
CTNS-209ENST00000574776 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.62□□□□□ -0.87
CTNS-209ENST00000574776 IGKV2-29A2NJV5 120 aaPredicted RBP9.62□□□□□ -0.87
CTNS-209ENST00000574776 PRSS3P2Q8NHM4 247 aa9.62□□□□□ -0.87
CTNS-209ENST00000574776 GTSF1Q8WW33 167 aa9.62□□□□□ -0.87
CTNS-209ENST00000574776 CHCHD10Q8WYQ3 142 aaPredicted RBP9.62□□□□□ -0.87
CTNS-209ENST00000574776 PHOX2AO14813 284 aa9.61□□□□□ -0.87
CTNS-209ENST00000574776 NCR2O95944 276 aa9.61□□□□□ -0.87
CTNS-209ENST00000574776 SMIM15Q7Z3B0 74 aa9.61□□□□□ -0.87
CTNS-209ENST00000574776 SLC51BQ86UW2 128 aa9.61□□□□□ -0.87
CTNS-209ENST00000574776 FGF6P10767 208 aa9.6□□□□□ -0.87
CTNS-209ENST00000574776 TAGLN2P37802 199 aaKnown RBP9.6□□□□□ -0.87
CTNS-209ENST00000574776 MAJINQ3KP22 176 aa9.6□□□□□ -0.87
CTNS-209ENST00000574776 IGKV2-24A0A0C4DH68 120 aa9.59□□□□□ -0.87
CTNS-209ENST00000574776 SDHAF1A6NFY7 115 aa9.59□□□□□ -0.87
CTNS-209ENST00000574776 H7C423 109 aa9.59□□□□□ -0.87
CTNS-209ENST00000574776 GATCO43716 136 aaKnown RBP9.59□□□□□ -0.87
CTNS-209ENST00000574776 NDUFS6O75380 124 aaKnown RBP9.59□□□□□ -0.87
CTNS-209ENST00000574776 APCSP02743 223 aa9.59□□□□□ -0.87
CTNS-209ENST00000574776 TEX261Q6UWH6 196 aa9.59□□□□□ -0.87
CTNS-209ENST00000574776 TCTE3Q8IZS6 198 aa9.59□□□□□ -0.87
CTNS-209ENST00000574776 C7orf33Q8WU49 177 aa9.59□□□□□ -0.87
CTNS-209ENST00000574776 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
CTNS-209ENST00000574776 PMCHP20382 165 aa9.58□□□□□ -0.88
CTNS-209ENST00000574776 GVQW2A0A096LPI5 108 aaPredicted RBP9.57□□□□□ -0.88
CTNS-209ENST00000574776 I3L3M4 83 aa9.57□□□□□ -0.88
CTNS-209ENST00000574776 FOXI1Q12951 378 aa9.57□□□□□ -0.88
CTNS-209ENST00000574776 STPG4Q8N801 248 aa9.57□□□□□ -0.88
CTNS-209ENST00000574776 OR5A1Q8NGJ0 315 aa9.57□□□□□ -0.88
CTNS-209ENST00000574776 LYPD6BQ8NI32 183 aa9.57□□□□□ -0.88
CTNS-209ENST00000574776 A8MWL6 223 aa9.56□□□□□ -0.88
CTNS-209ENST00000574776 GAS8-AS1O95177 125 aa9.56□□□□□ -0.88
CTNS-209ENST00000574776 XCL1P47992 114 aa9.56□□□□□ -0.88
CTNS-209ENST00000574776 BTF3L4Q96K17 158 aa9.56□□□□□ -0.88
CTNS-209ENST00000574776 ZNF25P17030 456 aaPredicted RBP9.55□□□□□ -0.88
CTNS-209ENST00000574776 FAM231DQ6ZW35 169 aa9.55□□□□□ -0.88
CTNS-209ENST00000574776 LINC00526Q96FQ7 95 aa9.55□□□□□ -0.88
CTNS-209ENST00000574776 TMEM101Q96IK0 257 aa9.55□□□□□ -0.88
CTNS-209ENST00000574776 A0A096LNI7 61 aa9.54□□□□□ -0.88
CTNS-209ENST00000574776 TRBV6-5A0A0K0K1A5 114 aa9.54□□□□□ -0.88
CTNS-209ENST00000574776 LINC00959A0A1B0GUT2 108 aa9.54□□□□□ -0.88
CTNS-209ENST00000574776 TMEM250H0YL14 139 aa9.54□□□□□ -0.88
CTNS-209ENST00000574776 CCL25O15444 150 aa9.54□□□□□ -0.88
CTNS-209ENST00000574776 ESDP10768 282 aa9.54□□□□□ -0.88
CTNS-209ENST00000574776 CEBPGP53567 150 aa9.54□□□□□ -0.88
CTNS-209ENST00000574776 TSHBP01222 138 aa9.53□□□□□ -0.88
CTNS-209ENST00000574776 BLOC1S1P78537 153 aa9.53□□□□□ -0.88
CTNS-209ENST00000574776 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
CTNS-209ENST00000574776 ST20Q9HBF5 79 aa9.53□□□□□ -0.88
CTNS-209ENST00000574776 TMEM242Q9NWH2 141 aa9.53□□□□□ -0.88
CTNS-209ENST00000574776 IGHV1-58A0A0C4DH39 117 aa9.52□□□□□ -0.89
CTNS-209ENST00000574776 ALKAL2Q6UX46 152 aa9.52□□□□□ -0.89
CTNS-209ENST00000574776 BORCS7Q96B45 105 aa9.52□□□□□ -0.89
CTNS-209ENST00000574776 TNXBP22105 4242 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms