RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 C3orf22Q8N5N4 141 aa10.59□□□□□ -0.71
SMG6-215ENST00000574501 NDUFA7O95182 113 aa10.59□□□□□ -0.71
SMG6-215ENST00000574501 CITED2Q99967 270 aaPredicted RBP10.59□□□□□ -0.71
SMG6-215ENST00000574501 A0A0U1RRA0 63 aa10.58□□□□□ -0.72
SMG6-215ENST00000574501 PROK1P58294 105 aa10.58□□□□□ -0.72
SMG6-215ENST00000574501 CRYBG3Q68DQ2 2970 aa10.58□□□□□ -0.72
SMG6-215ENST00000574501 AKAP6Q13023 2319 aa10.58□□□□□ -0.72
SMG6-215ENST00000574501 CDSNQ15517 529 aa10.58□□□□□ -0.72
SMG6-215ENST00000574501 DCANP1Q8TF63 244 aa10.58□□□□□ -0.72
SMG6-215ENST00000574501 HERVK_113P63121 156 aa10.57□□□□□ -0.72
SMG6-215ENST00000574501 C19orf54Q5BKX5 351 aa10.57□□□□□ -0.72
SMG6-215ENST00000574501 NRGNQ92686 78 aa10.57□□□□□ -0.72
SMG6-215ENST00000574501 IMUPQ9GZP8 106 aa10.57□□□□□ -0.72
SMG6-215ENST00000574501 COL6A6A6NMZ7 2263 aa10.57□□□□□ -0.72
SMG6-215ENST00000574501 MAP1AP78559 2803 aaPredicted RBP10.56□□□□□ -0.72
SMG6-215ENST00000574501 PTPRQQ9UMZ3 2332 aa10.56□□□□□ -0.72
SMG6-215ENST00000574501 NPFFO15130 113 aa10.56□□□□□ -0.72
SMG6-215ENST00000574501 UBTD1Q9HAC8 227 aa10.56□□□□□ -0.72
SMG6-215ENST00000574501 Q9UF83 564 aa10.56□□□□□ -0.72
SMG6-215ENST00000574501 CSDC2Q9Y534 153 aaKnown RBP10.56□□□□□ -0.72
SMG6-215ENST00000574501 SORL1Q92673 2214 aa10.56□□□□□ -0.72
SMG6-215ENST00000574501 ACYP1P07311 99 aa10.56□□□□□ -0.72
SMG6-215ENST00000574501 PF4V1P10720 104 aa10.56□□□□□ -0.72
SMG6-215ENST00000574501 SPINK13Q1W4C9 94 aa10.56□□□□□ -0.72
SMG6-215ENST00000574501 C11orf71Q6IPW1 123 aa10.56□□□□□ -0.72
SMG6-215ENST00000574501 ZNF625Q96I27 306 aaPredicted RBP10.56□□□□□ -0.72
SMG6-215ENST00000574501 DNAJC30Q96LL9 226 aa10.56□□□□□ -0.72
SMG6-215ENST00000574501 MOB4Q9Y3A3 225 aa10.56□□□□□ -0.72
SMG6-215ENST00000574501 SPTAN1Q13813 2472 aaKnown RBP10.56□□□□□ -0.72
SMG6-215ENST00000574501 SPTA1P02549 2419 aa10.55□□□□□ -0.72
SMG6-215ENST00000574501 HTN1P15515 57 aa10.55□□□□□ -0.72
SMG6-215ENST00000574501 DAZ2Q13117 558 aaKnown RBP10.55□□□□□ -0.72
SMG6-215ENST00000574501 DAZ4Q86SG3 579 aaKnown RBP10.55□□□□□ -0.72
SMG6-215ENST00000574501 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
SMG6-215ENST00000574501 DAZ3Q9NR90 486 aaKnown RBP10.55□□□□□ -0.72
SMG6-215ENST00000574501 PYGO1Q9Y3Y4 419 aa10.55□□□□□ -0.72
SMG6-215ENST00000574501 ACACBO00763 2458 aa10.55□□□□□ -0.72
SMG6-215ENST00000574501 UQCRQO14949 82 aa10.55□□□□□ -0.72
SMG6-215ENST00000574501 LINC00643Q86TS7 51 aa10.55□□□□□ -0.72
SMG6-215ENST00000574501 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.54□□□□□ -0.72
SMG6-215ENST00000574501 IGHV1OR15-1A0A075B7D0 117 aa10.54□□□□□ -0.72
SMG6-215ENST00000574501 IGKV2-29A2NJV5 120 aaPredicted RBP10.54□□□□□ -0.72
SMG6-215ENST00000574501 TINCRA0A1B0GVN0 87 aa10.54□□□□□ -0.72
SMG6-215ENST00000574501 IGHG2P01859 326 aa10.54□□□□□ -0.72
SMG6-215ENST00000574501 LY6DQ14210 128 aa10.54□□□□□ -0.72
SMG6-215ENST00000574501 Q8N2B8 174 aa10.54□□□□□ -0.72
SMG6-215ENST00000574501 CCL21O00585 134 aa10.53□□□□□ -0.72
SMG6-215ENST00000574501 LY6EQ16553 131 aa10.53□□□□□ -0.72
SMG6-215ENST00000574501 LINC00526Q96FQ7 95 aa10.53□□□□□ -0.72
SMG6-215ENST00000574501 ATP5J2P56134 94 aa10.53□□□□□ -0.72
SMG6-215ENST00000574501 BRD3OSQ6XYD6 125 aa10.53□□□□□ -0.72
SMG6-215ENST00000574501 CDKN2A-AS1Q9UH64 79 aa10.53□□□□□ -0.72
SMG6-215ENST00000574501 COX7A2LO14548 114 aa10.52□□□□□ -0.73
SMG6-215ENST00000574501 KNCNA6PVL3 124 aa10.52□□□□□ -0.73
SMG6-215ENST00000574501 LINC00308Q8TCZ7 52 aa10.52□□□□□ -0.73
SMG6-215ENST00000574501 BAALC-AS2P0C853 105 aa10.51□□□□□ -0.73
SMG6-215ENST00000574501 EDA2RQ9HAV5 297 aa10.51□□□□□ -0.73
SMG6-215ENST00000574501 PRM2P04554 102 aa10.5□□□□□ -0.73
SMG6-215ENST00000574501 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.5□□□□□ -0.73
SMG6-215ENST00000574501 UBE2D4Q9Y2X8 147 aa10.5□□□□□ -0.73
SMG6-215ENST00000574501 CSMD2Q7Z408 3487 aa10.5□□□□□ -0.73
SMG6-215ENST00000574501 DOPEY2Q9Y3R5 2298 aa10.5□□□□□ -0.73
SMG6-215ENST00000574501 IGHV3-38A0A0C4DH36 116 aa10.5□□□□□ -0.73
SMG6-215ENST00000574501 TIRAPP58753 221 aa10.5□□□□□ -0.73
SMG6-215ENST00000574501 GAGE2AQ6NT46 116 aa10.5□□□□□ -0.73
SMG6-215ENST00000574501 USMG5Q96IX5 58 aa10.5□□□□□ -0.73
SMG6-215ENST00000574501 TIMM17BO60830 172 aa10.49□□□□□ -0.73
SMG6-215ENST00000574501 FAM19A5Q7Z5A7 132 aaPredicted RBP10.49□□□□□ -0.73
SMG6-215ENST00000574501 RS1O15537 224 aa10.49□□□□□ -0.73
SMG6-215ENST00000574501 BLCAPP62952 87 aa10.49□□□□□ -0.73
SMG6-215ENST00000574501 CIRBPQ14011 172 aaKnown RBP10.49□□□□□ -0.73
SMG6-215ENST00000574501 CHCHD7Q9BUK0 85 aa10.49□□□□□ -0.73
SMG6-215ENST00000574501 Q9H8V8 135 aa10.49□□□□□ -0.73
SMG6-215ENST00000574501 C22orf24Q9Y442 160 aa10.49□□□□□ -0.73
SMG6-215ENST00000574501 NDUFA1O15239 70 aa10.48□□□□□ -0.73
SMG6-215ENST00000574501 COX7CP15954 63 aa10.48□□□□□ -0.73
SMG6-215ENST00000574501 SOSTDC1Q6X4U4 206 aa10.48□□□□□ -0.73
SMG6-215ENST00000574501 C5orf38Q86SI9 138 aa10.48□□□□□ -0.73
SMG6-215ENST00000574501 FAM218AQ96MZ4 157 aa10.48□□□□□ -0.73
SMG6-215ENST00000574501 LINC00467Q9BRT7 94 aa10.48□□□□□ -0.73
SMG6-215ENST00000574501 NACAE9PAV3 2078 aa10.48□□□□□ -0.73
SMG6-215ENST00000574501 A0A1W2PPR1 153 aa10.48□□□□□ -0.73
SMG6-215ENST00000574501 Q6ZSN1 163 aa10.48□□□□□ -0.73
SMG6-215ENST00000574501 BPESC1Q9GZL8 116 aa10.48□□□□□ -0.73
SMG6-215ENST00000574501 CUBNO60494 3623 aa10.48□□□□□ -0.73
SMG6-215ENST00000574501 J3KT08 172 aa10.47□□□□□ -0.73
SMG6-215ENST00000574501 COX6A2Q02221 97 aa10.47□□□□□ -0.73
SMG6-215ENST00000574501 BEAN1Q3B7T3 259 aa10.47□□□□□ -0.73
SMG6-215ENST00000574501 C2orf48Q96LS8 159 aa10.47□□□□□ -0.73
SMG6-215ENST00000574501 CYSTM1Q9H1C7 97 aa10.47□□□□□ -0.73
SMG6-215ENST00000574501 Q9HAA7 133 aa10.47□□□□□ -0.73
SMG6-215ENST00000574501 hADV29S1A0JD25 119 aa10.47□□□□□ -0.73
SMG6-215ENST00000574501 SDIM1Q6ZPB5 146 aa10.47□□□□□ -0.73
SMG6-215ENST00000574501 PEMTQ9UBM1 199 aa10.47□□□□□ -0.73
SMG6-215ENST00000574501 LMO4P61968 165 aa10.46□□□□□ -0.73
SMG6-215ENST00000574501 FBXL19-AS1Q494R0 122 aa10.46□□□□□ -0.74
SMG6-215ENST00000574501 PKD1L2Q7Z442 2459 aa10.46□□□□□ -0.74
SMG6-215ENST00000574501 TRAV13-1A0A0B4J241 112 aa10.45□□□□□ -0.74
SMG6-215ENST00000574501 SMIM9A6NGZ8 99 aa10.45□□□□□ -0.74
SMG6-215ENST00000574501 K7ENP7 123 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms