RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 A0A1B0GW15 77 aa9.37□□□□□ -0.91
TVP23A-208ENST00000573857 H7C1H1 209 aa9.37□□□□□ -0.91
TVP23A-208ENST00000573857 ATRAIDQ6UW56 229 aa9.37□□□□□ -0.91
TVP23A-208ENST00000573857 TRBV6-8A0A0A6YYG3 113 aa9.36□□□□□ -0.91
TVP23A-208ENST00000573857 SMIM27A0A1W2PRY6 76 aa9.36□□□□□ -0.91
TVP23A-208ENST00000573857 S100A8P05109 93 aa9.36□□□□□ -0.91
TVP23A-208ENST00000573857 RIGQ13278 110 aa9.36□□□□□ -0.91
TVP23A-208ENST00000573857 NDUFA5Q16718 116 aa9.36□□□□□ -0.91
TVP23A-208ENST00000573857 SCXQ7RTU7 201 aa9.36□□□□□ -0.91
TVP23A-208ENST00000573857 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.36□□□□□ -0.91
TVP23A-208ENST00000573857 PGLYRP4Q96LB8 373 aa9.36□□□□□ -0.91
TVP23A-208ENST00000573857 DPH3P1Q9H4G8 78 aa9.36□□□□□ -0.91
TVP23A-208ENST00000573857 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
TVP23A-208ENST00000573857 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
TVP23A-208ENST00000573857 F5H697 171 aa9.35□□□□□ -0.91
TVP23A-208ENST00000573857 J3QL48 77 aa9.35□□□□□ -0.91
TVP23A-208ENST00000573857 SSTP61278 116 aa9.35□□□□□ -0.91
TVP23A-208ENST00000573857 Q0VG73 95 aa9.35□□□□□ -0.91
TVP23A-208ENST00000573857 ZNF56Q15929 161 aa9.35□□□□□ -0.91
TVP23A-208ENST00000573857 NEXN-AS1Q8NBZ9 246 aa9.35□□□□□ -0.91
TVP23A-208ENST00000573857 CTDSP1Q9GZU7 261 aa9.35□□□□□ -0.91
TVP23A-208ENST00000573857 TMEM262E9PQX1 116 aa9.34□□□□□ -0.91
TVP23A-208ENST00000573857 C10orf91Q5T1B1 145 aa9.34□□□□□ -0.91
TVP23A-208ENST00000573857 NUP35Q8NFH5 326 aa9.34□□□□□ -0.91
TVP23A-208ENST00000573857 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
TVP23A-208ENST00000573857 CHAC1Q9BUX1 264 aa9.34□□□□□ -0.91
TVP23A-208ENST00000573857 KIF25-AS1Q9Y6Z4 181 aa9.34□□□□□ -0.91
TVP23A-208ENST00000573857 MPV17L2Q567V2 206 aa9.33□□□□□ -0.92
TVP23A-208ENST00000573857 ENHOQ6UWT2 76 aa9.33□□□□□ -0.92
TVP23A-208ENST00000573857 DEFB104AQ8WTQ1 72 aa9.33□□□□□ -0.92
TVP23A-208ENST00000573857 C1orf43Q9BWL3 253 aa9.33□□□□□ -0.92
TVP23A-208ENST00000573857 TMEM242Q9NWH2 141 aa9.33□□□□□ -0.92
TVP23A-208ENST00000573857 CARHSP1Q9Y2V2 147 aaKnown RBP9.33□□□□□ -0.92
TVP23A-208ENST00000573857 CRPP02741 224 aa9.32□□□□□ -0.92
TVP23A-208ENST00000573857 ADCYAP1P18509 176 aa9.32□□□□□ -0.92
TVP23A-208ENST00000573857 C14orf177Q52M58 125 aa9.32□□□□□ -0.92
TVP23A-208ENST00000573857 ATP5L2Q7Z4Y8 100 aa9.32□□□□□ -0.92
TVP23A-208ENST00000573857 TMEM191AQ9H0A3 160 aa9.32□□□□□ -0.92
TVP23A-208ENST00000573857 LRP1Q07954 4544 aaKnown RBP9.32□□□□□ -0.92
TVP23A-208ENST00000573857 KRTAP29-1A8MX34 341 aaPredicted RBP9.31□□□□□ -0.92
TVP23A-208ENST00000573857 ANGP03950 147 aaKnown RBP9.31□□□□□ -0.92
TVP23A-208ENST00000573857 RHEBQ15382 184 aa9.31□□□□□ -0.92
TVP23A-208ENST00000573857 SVBPQ8N300 66 aa9.31□□□□□ -0.92
TVP23A-208ENST00000573857 CIRBP-AS1Q8TBR5 109 aa9.31□□□□□ -0.92
TVP23A-208ENST00000573857 CHCHD5Q9BSY4 110 aa9.31□□□□□ -0.92
TVP23A-208ENST00000573857 MGPP08493 103 aa9.3□□□□□ -0.92
TVP23A-208ENST00000573857 KRTAP10-4P60372 401 aaPredicted RBP9.3□□□□□ -0.92
TVP23A-208ENST00000573857 PKIAP61925 76 aa9.3□□□□□ -0.92
TVP23A-208ENST00000573857 TMEM97Q5BJF2 176 aa9.3□□□□□ -0.92
TVP23A-208ENST00000573857 TRAV9-1A0A075B6T8 112 aa9.29□□□□□ -0.92
TVP23A-208ENST00000573857 SNAPINO95295 136 aa9.29□□□□□ -0.92
TVP23A-208ENST00000573857 PPP1R17O96001 155 aa9.29□□□□□ -0.92
TVP23A-208ENST00000573857 S100PP25815 95 aa9.29□□□□□ -0.92
TVP23A-208ENST00000573857 RASL11AQ6T310 242 aa9.29□□□□□ -0.92
TVP23A-208ENST00000573857 NTM-AS1Q6ZSK4 140 aa9.29□□□□□ -0.92
TVP23A-208ENST00000573857 BTF3L4Q96K17 158 aa9.29□□□□□ -0.92
TVP23A-208ENST00000573857 USP17L23D6RBM5 183 aa9.28□□□□□ -0.92
TVP23A-208ENST00000573857 M0QY20 66 aa9.28□□□□□ -0.92
TVP23A-208ENST00000573857 HBBP68871 147 aa9.28□□□□□ -0.92
TVP23A-208ENST00000573857 MIAQ16674 131 aa9.28□□□□□ -0.92
TVP23A-208ENST00000573857 NIT2Q9NQR4 276 aa9.28□□□□□ -0.92
TVP23A-208ENST00000573857 FAT3Q8TDW7 4589 aa9.27□□□□□ -0.92
TVP23A-208ENST00000573857 HLA-DQA1P01909 254 aa9.27□□□□□ -0.93
TVP23A-208ENST00000573857 APOC3P02656 99 aa9.27□□□□□ -0.93
TVP23A-208ENST00000573857 SUMO4Q6EEV6 95 aa9.27□□□□□ -0.93
TVP23A-208ENST00000573857 CLRN3Q8NCR9 226 aa9.27□□□□□ -0.93
TVP23A-208ENST00000573857 MRAP2Q96G30 205 aa9.27□□□□□ -0.93
TVP23A-208ENST00000573857 PRR34Q9NV39 138 aa9.27□□□□□ -0.93
TVP23A-208ENST00000573857 TRBV25-1A0A075B6N4 114 aa9.26□□□□□ -0.93
TVP23A-208ENST00000573857 C7orf77A4D0Y5 90 aa9.26□□□□□ -0.93
TVP23A-208ENST00000573857 CAMPP49913 170 aa9.26□□□□□ -0.93
TVP23A-208ENST00000573857 RBX1P62877 108 aa9.26□□□□□ -0.93
TVP23A-208ENST00000573857 CLPSL2Q6UWE3 100 aa9.26□□□□□ -0.93
TVP23A-208ENST00000573857 PKHD1L1Q86WI1 4243 aa9.26□□□□□ -0.93
TVP23A-208ENST00000573857 PRSS1P07477 247 aa9.25□□□□□ -0.93
TVP23A-208ENST00000573857 GAGE6Q13070 117 aa9.25□□□□□ -0.93
TVP23A-208ENST00000573857 IQCJQ1A5X6 159 aa9.25□□□□□ -0.93
TVP23A-208ENST00000573857 KRTAP26-1Q6PEX3 210 aa9.25□□□□□ -0.93
TVP23A-208ENST00000573857 LINC00269Q8N2A0 174 aa9.25□□□□□ -0.93
TVP23A-208ENST00000573857 HMCN2Q8NDA2 5059 aa9.24□□□□□ -0.93
TVP23A-208ENST00000573857 IGHV1-24A0A0C4DH33 117 aa9.24□□□□□ -0.93
TVP23A-208ENST00000573857 A0A1B0GXF2 115 aa9.24□□□□□ -0.93
TVP23A-208ENST00000573857 PPBPP02775 128 aa9.24□□□□□ -0.93
TVP23A-208ENST00000573857 RAB4AP20338 218 aa9.24□□□□□ -0.93
TVP23A-208ENST00000573857 COX19Q49B96 90 aa9.24□□□□□ -0.93
TVP23A-208ENST00000573857 FAM104BQ5XKR9 115 aa9.24□□□□□ -0.93
TVP23A-208ENST00000573857 DGAT2L7PQ6IED9 249 aa9.24□□□□□ -0.93
TVP23A-208ENST00000573857 MRPL54Q6P161 138 aaKnown RBP9.24□□□□□ -0.93
TVP23A-208ENST00000573857 GATD1Q8NB37 220 aa9.24□□□□□ -0.93
TVP23A-208ENST00000573857 RPS10P5Q9NQ39 176 aa9.24□□□□□ -0.93
TVP23A-208ENST00000573857 TRBV6-5A0A0K0K1A5 114 aa9.22□□□□□ -0.93
TVP23A-208ENST00000573857 AMN1Q8IY45 258 aa9.22□□□□□ -0.93
TVP23A-208ENST00000573857 OXTP01178 125 aa9.21□□□□□ -0.94
TVP23A-208ENST00000573857 CKS2P33552 79 aa9.21□□□□□ -0.94
TVP23A-208ENST00000573857 REG3AQ06141 175 aa9.21□□□□□ -0.94
TVP23A-208ENST00000573857 C9orf163Q8N9P6 203 aa9.21□□□□□ -0.94
TVP23A-208ENST00000573857 RNF185Q96GF1 192 aa9.21□□□□□ -0.94
TVP23A-208ENST00000573857 ST20Q9HBF5 79 aa9.21□□□□□ -0.94
TVP23A-208ENST00000573857 TRAV26-2A0A0B4J265 109 aa9.2□□□□□ -0.94
TVP23A-208ENST00000573857 NCR2O95944 276 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms