RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 DOPEY1Q5JWR5 2465 aa13.92□□□□□ -0.18
SCARF1-206ENST00000573852 DEFB131AP59861 70 aa13.91□□□□□ -0.18
SCARF1-206ENST00000573852 Q1RN00 199 aa13.91□□□□□ -0.18
SCARF1-206ENST00000573852 TNFRSF18Q9Y5U5 241 aa13.91□□□□□ -0.18
SCARF1-206ENST00000573852 RBMY1BA6NDE4 496 aaKnown RBP13.91□□□□□ -0.18
SCARF1-206ENST00000573852 RBMY1EA6NEQ0 496 aaKnown RBP13.91□□□□□ -0.18
SCARF1-206ENST00000573852 RBMY1DP0C7P1 496 aaKnown RBP13.91□□□□□ -0.18
SCARF1-206ENST00000573852 MAPK1IP1LQ8NDC0 245 aa13.91□□□□□ -0.18
SCARF1-206ENST00000573852 MXRA5Q9NR99 2828 aa13.91□□□□□ -0.18
SCARF1-206ENST00000573852 ADAMTSL4-AS1Q5T5F5 129 aa13.9□□□□□ -0.18
SCARF1-206ENST00000573852 LINC01356Q8N9X3 169 aa13.9□□□□□ -0.18
SCARF1-206ENST00000573852 A8MZ25 164 aa13.89□□□□□ -0.19
SCARF1-206ENST00000573852 C18orf65Q6ZTR6 163 aa13.89□□□□□ -0.19
SCARF1-206ENST00000573852 UBE2E2Q96LR5 201 aa13.89□□□□□ -0.19
SCARF1-206ENST00000573852 IGHV1-58A0A0C4DH39 117 aa13.89□□□□□ -0.19
SCARF1-206ENST00000573852 PRSS2P07478 247 aa13.89□□□□□ -0.19
SCARF1-206ENST00000573852 DEFB136Q30KP8 78 aa13.89□□□□□ -0.19
SCARF1-206ENST00000573852 DUX3Q96PT4 197 aa13.89□□□□□ -0.19
SCARF1-206ENST00000573852 CHCHD7Q9BUK0 85 aa13.89□□□□□ -0.19
SCARF1-206ENST00000573852 ZNF702PQ9H963 129 aa13.89□□□□□ -0.19
SCARF1-206ENST00000573852 BEX4Q9NWD9 120 aaPredicted RBP13.89□□□□□ -0.19
SCARF1-206ENST00000573852 M0QXV9 152 aa13.88□□□□□ -0.19
SCARF1-206ENST00000573852 SLURP1P55000 103 aa13.88□□□□□ -0.19
SCARF1-206ENST00000573852 H3BMM0 161 aa13.88□□□□□ -0.19
SCARF1-206ENST00000573852 VPREB3Q9UKI3 123 aa13.88□□□□□ -0.19
SCARF1-206ENST00000573852 NDUFA12Q9UI09 145 aa13.87□□□□□ -0.19
SCARF1-206ENST00000573852 TRIAP1O43715 76 aa13.87□□□□□ -0.19
SCARF1-206ENST00000573852 LINC01620Q4KN68 170 aa13.87□□□□□ -0.19
SCARF1-206ENST00000573852 UBE2D4Q9Y2X8 147 aa13.87□□□□□ -0.19
SCARF1-206ENST00000573852 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.87□□□□□ -0.19
SCARF1-206ENST00000573852 IGKV2-29A2NJV5 120 aaPredicted RBP13.87□□□□□ -0.19
SCARF1-206ENST00000573852 ATXN8Q156A1 80 aa13.87□□□□□ -0.19
SCARF1-206ENST00000573852 VSIG2Q96IQ7 327 aa13.87□□□□□ -0.19
SCARF1-206ENST00000573852 TRBV30A0A0K0K1B3 111 aa13.86□□□□□ -0.19
SCARF1-206ENST00000573852 TINCRA0A1B0GVN0 87 aa13.86□□□□□ -0.19
SCARF1-206ENST00000573852 DSCR9P59020 149 aa13.86□□□□□ -0.19
SCARF1-206ENST00000573852 A0A096LNT2 108 aa13.86□□□□□ -0.19
SCARF1-206ENST00000573852 A8MTW9 85 aa13.86□□□□□ -0.19
SCARF1-206ENST00000573852 NTN5Q8WTR8 489 aaPredicted RBP13.85□□□□□ -0.19
SCARF1-206ENST00000573852 NPC2P61916 151 aa13.85□□□□□ -0.19
SCARF1-206ENST00000573852 SPANXDQ9BXN6 97 aa13.85□□□□□ -0.19
SCARF1-206ENST00000573852 SPANXCQ9NY87 97 aa13.85□□□□□ -0.19
SCARF1-206ENST00000573852 POLQO75417 2590 aa13.84□□□□□ -0.19
SCARF1-206ENST00000573852 IGHV3-38A0A0C4DH36 116 aa13.84□□□□□ -0.19
SCARF1-206ENST00000573852 TMEM262E9PQX1 116 aa13.84□□□□□ -0.19
SCARF1-206ENST00000573852 LINC00467Q9BRT7 94 aa13.84□□□□□ -0.19
SCARF1-206ENST00000573852 ANKRD17O75179 2603 aaKnown RBP13.84□□□□□ -0.19
SCARF1-206ENST00000573852 Q6ZSV7 163 aa13.84□□□□□ -0.19
SCARF1-206ENST00000573852 RNF183Q96D59 192 aa13.84□□□□□ -0.19
SCARF1-206ENST00000573852 SPANXA1Q9NS26 97 aa13.84□□□□□ -0.19
SCARF1-206ENST00000573852 ZNF415Q09FC8 603 aa13.83□□□□□ -0.2
SCARF1-206ENST00000573852 MIAQ16674 131 aa13.83□□□□□ -0.2
SCARF1-206ENST00000573852 Q6YL49 198 aa13.82□□□□□ -0.2
SCARF1-206ENST00000573852 TMEM61Q8N0U2 210 aa13.82□□□□□ -0.2
SCARF1-206ENST00000573852 J3QLI3 93 aa13.82□□□□□ -0.2
SCARF1-206ENST00000573852 ICOSQ9Y6W8 199 aa13.82□□□□□ -0.2
SCARF1-206ENST00000573852 IGSF10Q6WRI0 2623 aa13.81□□□□□ -0.2
SCARF1-206ENST00000573852 PIK3CD-AS1Q5SR53 167 aa13.81□□□□□ -0.2
SCARF1-206ENST00000573852 C11orf72Q8NBR9 251 aa13.81□□□□□ -0.2
SCARF1-206ENST00000573852 FBN2P35556 2912 aa13.8□□□□□ -0.2
SCARF1-206ENST00000573852 TRBV10-2A0A0K0K1G8 114 aa13.8□□□□□ -0.2
SCARF1-206ENST00000573852 TEX49A0A1B0GTD5 131 aa13.8□□□□□ -0.2
SCARF1-206ENST00000573852 LINC01587Q99440 93 aa13.8□□□□□ -0.2
SCARF1-206ENST00000573852 LINC01600Q96MT4 127 aa13.8□□□□□ -0.2
SCARF1-206ENST00000573852 CENPEQ02224 2701 aa13.8□□□□□ -0.2
SCARF1-206ENST00000573852 IGHV3-53P01767 116 aa13.79□□□□□ -0.2
SCARF1-206ENST00000573852 ZFAND6Q6FIF0 208 aa13.79□□□□□ -0.2
SCARF1-206ENST00000573852 CDKN2A-AS1Q9UH64 79 aa13.79□□□□□ -0.2
SCARF1-206ENST00000573852 MYO18BQ8IUG5 2567 aa13.79□□□□□ -0.2
SCARF1-206ENST00000573852 CITED1Q99966 193 aa13.78□□□□□ -0.2
SCARF1-206ENST00000573852 MAP6D1Q9H9H5 199 aa13.78□□□□□ -0.2
SCARF1-206ENST00000573852 SS18L2Q9UHA2 77 aa13.78□□□□□ -0.2
SCARF1-206ENST00000573852 FSHBP01225 129 aa13.78□□□□□ -0.2
SCARF1-206ENST00000573852 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.78□□□□□ -0.2
SCARF1-206ENST00000573852 DAND5Q8N907 189 aa13.78□□□□□ -0.2
SCARF1-206ENST00000573852 HIST2H2BDQ6DRA6 164 aa13.77□□□□□ -0.2
SCARF1-206ENST00000573852 RPL13AP40429 203 aaKnown RBP13.77□□□□□ -0.21
SCARF1-206ENST00000573852 BEAN1Q3B7T3 259 aa13.77□□□□□ -0.21
SCARF1-206ENST00000573852 CLEC2BQ92478 149 aa13.77□□□□□ -0.21
SCARF1-206ENST00000573852 H7C423 109 aa13.76□□□□□ -0.21
SCARF1-206ENST00000573852 DNAJC30Q96LL9 226 aa13.76□□□□□ -0.21
SCARF1-206ENST00000573852 TMEM101Q96IK0 257 aa13.76□□□□□ -0.21
SCARF1-206ENST00000573852 PIEZO1Q92508 2521 aa13.75□□□□□ -0.21
SCARF1-206ENST00000573852 MYO9AB2RTY4 2548 aa13.75□□□□□ -0.21
SCARF1-206ENST00000573852 RS1O15537 224 aa13.75□□□□□ -0.21
SCARF1-206ENST00000573852 COX6A2Q02221 97 aa13.75□□□□□ -0.21
SCARF1-206ENST00000573852 C2orf82Q6UX34 121 aa13.75□□□□□ -0.21
SCARF1-206ENST00000573852 TEX29Q8N6K0 151 aa13.75□□□□□ -0.21
SCARF1-206ENST00000573852 ANAPC13Q9BS18 74 aa13.75□□□□□ -0.21
SCARF1-206ENST00000573852 CRLF1O75462 422 aa13.74□□□□□ -0.21
SCARF1-206ENST00000573852 TIMM17BO60830 172 aa13.74□□□□□ -0.21
SCARF1-206ENST00000573852 UBE2WQ96B02 151 aa13.74□□□□□ -0.21
SCARF1-206ENST00000573852 YAE1D1Q9NRH1 226 aa13.74□□□□□ -0.21
SCARF1-206ENST00000573852 PEMTQ9UBM1 199 aa13.74□□□□□ -0.21
SCARF1-206ENST00000573852 TEX15Q9BXT5 2789 aa13.74□□□□□ -0.21
SCARF1-206ENST00000573852 IGLV5-45A0A087WSX0 123 aa13.73□□□□□ -0.21
SCARF1-206ENST00000573852 COX6CP09669 75 aa13.73□□□□□ -0.21
SCARF1-206ENST00000573852 TIRAPP58753 221 aa13.73□□□□□ -0.21
SCARF1-206ENST00000573852 NDUFA1O15239 70 aa13.73□□□□□ -0.21
SCARF1-206ENST00000573852 ACACBO00763 2458 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms