RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 C20orf78Q9BR46 151 aa14.95□□□□□ -0.02
RAB40B-207ENST00000572603 TRBV25-1A0A075B6N4 114 aa14.94□□□□□ -0.02
RAB40B-207ENST00000572603 I3L3M4 83 aa14.94□□□□□ -0.02
RAB40B-207ENST00000572603 RPL32P62910 135 aaKnown RBP14.94□□□□□ -0.02
RAB40B-207ENST00000572603 SMCO4Q9NRQ5 59 aa14.94□□□□□ -0.02
RAB40B-207ENST00000572603 FAT2Q9NYQ8 4349 aa14.93□□□□□ -0.02
RAB40B-207ENST00000572603 IGHV3-30P01768 117 aa14.93□□□□□ -0.02
RAB40B-207ENST00000572603 IGHV3-33P01772 117 aa14.93□□□□□ -0.02
RAB40B-207ENST00000572603 IGHV3-30-3P0DP02 117 aa14.93□□□□□ -0.02
RAB40B-207ENST00000572603 IGHV3-30-5P0DP03 117 aa14.93□□□□□ -0.02
RAB40B-207ENST00000572603 APCSP02743 223 aa14.92□□□□□ -0.02
RAB40B-207ENST00000572603 MT-ND6P03923 174 aa14.92□□□□□ -0.02
RAB40B-207ENST00000572603 PMCHP20382 165 aa14.92□□□□□ -0.02
RAB40B-207ENST00000572603 AMTP48728 403 aa14.92□□□□□ -0.02
RAB40B-207ENST00000572603 CHCHD5Q9BSY4 110 aa14.92□□□□□ -0.02
RAB40B-207ENST00000572603 SMIM2Q9BVW6 85 aa14.92□□□□□ -0.02
RAB40B-207ENST00000572603 LAMTOR2Q9Y2Q5 125 aa14.92□□□□□ -0.02
RAB40B-207ENST00000572603 KIAA1644Q3SXP7 199 aa14.91□□□□□ -0.02
RAB40B-207ENST00000572603 TMEM243Q9BU79 118 aa14.91□□□□□ -0.02
RAB40B-207ENST00000572603 CHCHD7Q9BUK0 85 aa14.91□□□□□ -0.02
RAB40B-207ENST00000572603 MRPL18Q9H0U6 180 aaKnown RBP14.91□□□□□ -0.02
RAB40B-207ENST00000572603 K7EP13 123 aa14.9□□□□□ -0.02
RAB40B-207ENST00000572603 VCYO14598 125 aa14.9□□□□□ -0.02
RAB40B-207ENST00000572603 MPV17L2Q567V2 206 aa14.9□□□□□ -0.02
RAB40B-207ENST00000572603 ESDP10768 282 aa14.89□□□□□ -0.03
RAB40B-207ENST00000572603 GAGE6Q13070 117 aa14.89□□□□□ -0.03
RAB40B-207ENST00000572603 PRSS47A8MTI9 375 aa14.88□□□□□ -0.03
RAB40B-207ENST00000572603 C10orf126Q8N4M7 172 aa14.88□□□□□ -0.03
RAB40B-207ENST00000572603 TRAV9-2A0A087WT02 112 aa14.86□□□□□ -0.03
RAB40B-207ENST00000572603 IBA57-AS1B1ANH7 110 aa14.86□□□□□ -0.03
RAB40B-207ENST00000572603 RTL8CO15255 209 aa14.86□□□□□ -0.03
RAB40B-207ENST00000572603 SCO1O75880 301 aa14.86□□□□□ -0.03
RAB40B-207ENST00000572603 PKIAP61925 76 aa14.86□□□□□ -0.03
RAB40B-207ENST00000572603 C6orf223Q8N319 242 aa14.86□□□□□ -0.03
RAB40B-207ENST00000572603 ALKBH7Q9BT30 221 aaPredicted RBP14.86□□□□□ -0.03
RAB40B-207ENST00000572603 MAP1LC3AQ9H492 121 aa14.86□□□□□ -0.03
RAB40B-207ENST00000572603 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.85□□□□□ -0.03
RAB40B-207ENST00000572603 A0A087WX48 190 aa14.85□□□□□ -0.03
RAB40B-207ENST00000572603 IGKV2-29A2NJV5 120 aaPredicted RBP14.85□□□□□ -0.03
RAB40B-207ENST00000572603 RBX1P62877 108 aa14.85□□□□□ -0.03
RAB40B-207ENST00000572603 FABP9Q0Z7S8 132 aa14.85□□□□□ -0.03
RAB40B-207ENST00000572603 Q8N976 141 aa14.85□□□□□ -0.03
RAB40B-207ENST00000572603 KIR2DL4Q99706 377 aa14.85□□□□□ -0.03
RAB40B-207ENST00000572603 TMEM262E9PQX1 116 aa14.84□□□□□ -0.03
RAB40B-207ENST00000572603 ATP6V1G1O75348 118 aa14.84□□□□□ -0.03
RAB40B-207ENST00000572603 BTF3P20290 206 aaKnown RBP14.84□□□□□ -0.03
RAB40B-207ENST00000572603 LAGE3Q14657 143 aa14.84□□□□□ -0.03
RAB40B-207ENST00000572603 C1orf134Q5TEV5 83 aa14.84□□□□□ -0.03
RAB40B-207ENST00000572603 TRAPPC1Q9Y5R8 145 aa14.84□□□□□ -0.03
RAB40B-207ENST00000572603 FCER1GP30273 86 aa14.83□□□□□ -0.04
RAB40B-207ENST00000572603 Q6ZRN7 208 aaPredicted RBP14.83□□□□□ -0.04
RAB40B-207ENST00000572603 LOC389332A0A1B0GUA5 103 aa14.82□□□□□ -0.04
RAB40B-207ENST00000572603 H7C423 109 aa14.82□□□□□ -0.04
RAB40B-207ENST00000572603 UBE2L6O14933 153 aa14.82□□□□□ -0.04
RAB40B-207ENST00000572603 TCAPO15273 167 aa14.82□□□□□ -0.04
RAB40B-207ENST00000572603 C20orf203Q8NBC4 194 aa14.82□□□□□ -0.04
RAB40B-207ENST00000572603 KLK12Q9UKR0 248 aa14.82□□□□□ -0.04
RAB40B-207ENST00000572603 DNAH11Q96DT5 4516 aa14.82□□□□□ -0.04
RAB40B-207ENST00000572603 IGLV4-60A0A075B6I1 120 aa14.81□□□□□ -0.04
RAB40B-207ENST00000572603 A0A1B0GUV1 79 aa14.81□□□□□ -0.04
RAB40B-207ENST00000572603 COLCA2A8K830 154 aa14.81□□□□□ -0.04
RAB40B-207ENST00000572603 Q8N8P6 123 aa14.81□□□□□ -0.04
RAB40B-207ENST00000572603 FGF6P10767 208 aa14.79□□□□□ -0.04
RAB40B-207ENST00000572603 HECTD4Q9Y4D8 3996 aa14.78□□□□□ -0.04
RAB40B-207ENST00000572603 ANGP03950 147 aaKnown RBP14.78□□□□□ -0.04
RAB40B-207ENST00000572603 IFI27P40305 119 aaPredicted RBP14.78□□□□□ -0.04
RAB40B-207ENST00000572603 Q9HAA7 133 aa14.78□□□□□ -0.04
RAB40B-207ENST00000572603 S100A1P23297 94 aa14.77□□□□□ -0.05
RAB40B-207ENST00000572603 ENHOQ6UWT2 76 aa14.77□□□□□ -0.05
RAB40B-207ENST00000572603 MRPL52Q86TS9 123 aaKnown RBP14.77□□□□□ -0.05
RAB40B-207ENST00000572603 NXT2Q9NPJ8 142 aaKnown RBP14.77□□□□□ -0.05
RAB40B-207ENST00000572603 PRR34Q9NV39 138 aa14.77□□□□□ -0.05
RAB40B-207ENST00000572603 PKD1P98161 4303 aa14.77□□□□□ -0.05
RAB40B-207ENST00000572603 UBE2WQ96B02 151 aa14.76□□□□□ -0.05
RAB40B-207ENST00000572603 ZNF25P17030 456 aaPredicted RBP14.75□□□□□ -0.05
RAB40B-207ENST00000572603 AMMECR1LQ6DCA0 310 aa14.75□□□□□ -0.05
RAB40B-207ENST00000572603 NFE4Q86UQ8 179 aa14.75□□□□□ -0.05
RAB40B-207ENST00000572603 C18orf32Q8TCD1 76 aa14.75□□□□□ -0.05
RAB40B-207ENST00000572603 UBE2D4Q9Y2X8 147 aa14.75□□□□□ -0.05
RAB40B-207ENST00000572603 TRAV8-3A0A0A6YYJ7 113 aa14.74□□□□□ -0.05
RAB40B-207ENST00000572603 RAB5AP20339 215 aa14.74□□□□□ -0.05
RAB40B-207ENST00000572603 RPL39P62891 51 aaKnown RBP14.74□□□□□ -0.05
RAB40B-207ENST00000572603 RNASEKQ6P5S7 137 aaKnown RBP14.74□□□□□ -0.05
RAB40B-207ENST00000572603 CLPSL2Q6UWE3 100 aa14.74□□□□□ -0.05
RAB40B-207ENST00000572603 LINC00269Q8N2A0 174 aa14.74□□□□□ -0.05
RAB40B-207ENST00000572603 LINC01546A6NGU7 62 aa14.73□□□□□ -0.05
RAB40B-207ENST00000572603 K7EMI3 77 aa14.73□□□□□ -0.05
RAB40B-207ENST00000572603 LINC00336Q6ZUF6 198 aa14.73□□□□□ -0.05
RAB40B-207ENST00000572603 CRPP02741 224 aa14.72□□□□□ -0.05
RAB40B-207ENST00000572603 TNP2Q05952 138 aa14.72□□□□□ -0.05
RAB40B-207ENST00000572603 TIMM21Q9BVV7 248 aa14.72□□□□□ -0.05
RAB40B-207ENST00000572603 TRGC2P03986 189 aa14.71□□□□□ -0.05
RAB40B-207ENST00000572603 REG3AQ06141 175 aa14.71□□□□□ -0.05
RAB40B-207ENST00000572603 URB1-AS1Q96HZ7 61 aa14.71□□□□□ -0.05
RAB40B-207ENST00000572603 CSDC2Q9Y534 153 aaKnown RBP14.71□□□□□ -0.05
RAB40B-207ENST00000572603 Q0VG73 95 aa14.7□□□□□ -0.06
RAB40B-207ENST00000572603 ORMDL2Q53FV1 153 aa14.7□□□□□ -0.06
RAB40B-207ENST00000572603 OR5A1Q8NGJ0 315 aa14.7□□□□□ -0.06
RAB40B-207ENST00000572603 PRSS3P2Q8NHM4 247 aa14.7□□□□□ -0.06
RAB40B-207ENST00000572603 FAM104AQ969W3 186 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms