RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 DEFA6Q01524 100 aa4.37□□□□□ -1.71
TRAPPC1-204ENST00000571947 DEFB135Q30KP9 77 aa4.37□□□□□ -1.71
TRAPPC1-204ENST00000571947 BAALCQ8WXS3 180 aa4.37□□□□□ -1.71
TRAPPC1-204ENST00000571947 TRGV4A0A0C4DH28 118 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 TRBV6-4A0A1B0GX49 114 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 LYRM9A8MSI8 78 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 F8VRH5 84 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 MIFP14174 115 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 RPL36AP83881 106 aaKnown RBP4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 FHL2Q14192 279 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 PMVKQ15126 192 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 ANKRD39Q53RE8 183 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 SLC25A29Q8N8R3 303 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 OR11H2Q8NH07 326 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 ZNRF2Q8NHG8 242 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 DEFB104AQ8WTQ1 72 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 RPL36ALQ969Q0 106 aaKnown RBP4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 RNF183Q96D59 192 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 C14orf144Q96I85 54 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 CHCHD7Q9BUK0 85 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 MRPL35Q9NZE8 188 aaKnown RBP4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 CHTOPQ9Y3Y2 248 aaKnown RBP4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 PYGO1Q9Y3Y4 419 aa4.36□□□□□ -1.71
TRAPPC1-204ENST00000571947 MAST4O15021 2626 aa4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 PRSS29PA6NIE9 313 aa4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 NPSP0C0P6 89 aa4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 COX8AP10176 69 aa4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 PLNP26678 52 aa4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 EMP1P54849 157 aa4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 UBE2D3P61077 147 aa4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 UBE2D2P62837 147 aa4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 COTL1Q14019 142 aa4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 MRPL52Q86TS9 123 aaKnown RBP4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 STPG4Q8N801 248 aa4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 PHLDA1Q8WV24 401 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 HHLA3Q9XRX5 114 aa4.35□□□□□ -1.71
TRAPPC1-204ENST00000571947 IGLV4-3A0A075B6K6 122 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 IGHV4-28A0A0C4DH34 117 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 IGHV3-38A0A0C4DH36 116 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 GAGE12JA6NER3 117 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 LINC00694P0DN24 101 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 DEFB130BP0DP73 79 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 DEFB130AP0DP74 79 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 HNRNPA3P51991 378 aaKnown RBP4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 CRYBA4P53673 196 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 GAGE1Q13065 139 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 GAGE4Q13068 117 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 GAGE5Q13069 117 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 GAGE13Q4V321 117 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 PAPPA-AS1Q5QFB9 102 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 SAMD5Q5TGI4 173 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 FAM222AQ5U5X8 452 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 SLC25A34Q6PIV7 304 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 DAZ4Q86SG3 579 aaKnown RBP4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 Q8NAQ8 132 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 PRADC1Q9BSG0 188 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 TIMM21Q9BVV7 248 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 CST9LQ9H4G1 147 aa4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 DAZ3Q9NR90 486 aaKnown RBP4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 MRPS16Q9Y3D3 137 aaKnown RBP4.34□□□□□ -1.71
TRAPPC1-204ENST00000571947 COL6A5A8TX70 2615 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 IGLV4-69A0A075B6H9 119 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 LOC100131303A0A0U1RQF7 123 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 G3V4G9 280 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 DLEU1O43261 78 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 FGF6P10767 208 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 CTAG1AP78358 180 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 ZC2HC1BQ5TFG8 222 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 NTM-AS1Q6ZSK4 140 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 SBSPONQ8IVN8 264 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 BOD1L2Q8IYS8 172 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 AMELXQ99217 191 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 OPRPNQ99935 248 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 GTSF1LQ9H1H1 148 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 VCX2Q9H322 139 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 SPANXA1Q9NS26 97 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 UBE2D4Q9Y2X8 147 aa4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 FBN1P35555 2871 aaKnown RBP4.33□□□□□ -1.72
TRAPPC1-204ENST00000571947 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 IGKV2D-26A0A0A0MRZ7 120 aa4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 IGKV2-29A2NJV5 120 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 C11orf86A6NJI1 115 aa4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 M0R143 59 aa4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 SPART-AS1P0CW21 52 aa4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 DAD1P61803 113 aa4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 MRPS36P82909 103 aaKnown RBP4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 SMAGPQ0VAQ4 97 aa4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 LBHQ53QV2 105 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 TMEM97Q5BJF2 176 aa4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 NFE4Q86UQ8 179 aa4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 FAM104AQ969W3 186 aa4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 SNHG12Q9BXW3 62 aa4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 PRO0255Q9UI72 69 aa4.32□□□□□ -1.72
TRAPPC1-204ENST00000571947 TEX48A0A1B0GUV7 120 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 E9PLD3 99 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 H7C423 109 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 EREGO14944 169 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 DEFB4AO15263 64 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 SIVA1O15304 175 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 NMUP48645 174 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms