RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 hDV102S1A0JD36 115 aa13.81□□□□□ -0.2
RPAIN-210ENST00000571613 LINC00587B1AMM8 73 aa13.81□□□□□ -0.2
RPAIN-210ENST00000571613 F8VRH5 84 aa13.81□□□□□ -0.2
RPAIN-210ENST00000571613 DEFB130BP0DP73 79 aa13.81□□□□□ -0.2
RPAIN-210ENST00000571613 DEFB130AP0DP74 79 aa13.81□□□□□ -0.2
RPAIN-210ENST00000571613 FHL2Q14192 279 aa13.81□□□□□ -0.2
RPAIN-210ENST00000571613 MAJINQ3KP22 176 aa13.81□□□□□ -0.2
RPAIN-210ENST00000571613 SAMD5Q5TGI4 173 aa13.81□□□□□ -0.2
RPAIN-210ENST00000571613 PYGO1Q9Y3Y4 419 aa13.81□□□□□ -0.2
RPAIN-210ENST00000571613 MAST4O15021 2626 aa13.8□□□□□ -0.2
RPAIN-210ENST00000571613 IGHV4-28A0A0C4DH34 117 aa13.8□□□□□ -0.2
RPAIN-210ENST00000571613 RPL39P62891 51 aaKnown RBP13.8□□□□□ -0.2
RPAIN-210ENST00000571613 Q9UF83 564 aa13.8□□□□□ -0.2
RPAIN-210ENST00000571613 CHTOPQ9Y3Y2 248 aaKnown RBP13.8□□□□□ -0.2
RPAIN-210ENST00000571613 TEX48A0A1B0GUV7 120 aa13.79□□□□□ -0.2
RPAIN-210ENST00000571613 UBE2D3P61077 147 aa13.79□□□□□ -0.2
RPAIN-210ENST00000571613 UBE2D2P62837 147 aa13.79□□□□□ -0.2
RPAIN-210ENST00000571613 PMVKQ15126 192 aa13.79□□□□□ -0.2
RPAIN-210ENST00000571613 FAM222AQ5U5X8 452 aa13.79□□□□□ -0.2
RPAIN-210ENST00000571613 Q8NAQ8 132 aa13.79□□□□□ -0.2
RPAIN-210ENST00000571613 CRYBA4P53673 196 aa13.79□□□□□ -0.2
RPAIN-210ENST00000571613 DEFA6Q01524 100 aa13.79□□□□□ -0.2
RPAIN-210ENST00000571613 SMAGPQ0VAQ4 97 aa13.79□□□□□ -0.2
RPAIN-210ENST00000571613 MRPL35Q9NZE8 188 aaKnown RBP13.79□□□□□ -0.2
RPAIN-210ENST00000571613 G3V4G9 280 aa13.78□□□□□ -0.2
RPAIN-210ENST00000571613 DEFB104AQ8WTQ1 72 aa13.78□□□□□ -0.2
RPAIN-210ENST00000571613 PHLDA1Q8WV24 401 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-210ENST00000571613 PRSS29PA6NIE9 313 aa13.77□□□□□ -0.21
RPAIN-210ENST00000571613 SPART-AS1P0CW21 52 aa13.77□□□□□ -0.21
RPAIN-210ENST00000571613 SPANXA1Q9NS26 97 aa13.77□□□□□ -0.21
RPAIN-210ENST00000571613 HHLA3Q9XRX5 114 aa13.77□□□□□ -0.21
RPAIN-210ENST00000571613 GAGE12JA6NER3 117 aa13.76□□□□□ -0.21
RPAIN-210ENST00000571613 GAGE1Q13065 139 aa13.76□□□□□ -0.21
RPAIN-210ENST00000571613 GAGE4Q13068 117 aa13.76□□□□□ -0.21
RPAIN-210ENST00000571613 GAGE5Q13069 117 aa13.76□□□□□ -0.21
RPAIN-210ENST00000571613 GAGE13Q4V321 117 aa13.76□□□□□ -0.21
RPAIN-210ENST00000571613 CHCHD7Q9BUK0 85 aa13.76□□□□□ -0.21
RPAIN-210ENST00000571613 GTSF1LQ9H1H1 148 aa13.76□□□□□ -0.21
RPAIN-210ENST00000571613 STAB1Q9NY15 2570 aa13.76□□□□□ -0.21
RPAIN-210ENST00000571613 TMEM97Q5BJF2 176 aa13.75□□□□□ -0.21
RPAIN-210ENST00000571613 IGHV3-38A0A0C4DH36 116 aa13.75□□□□□ -0.21
RPAIN-210ENST00000571613 DAD1P61803 113 aa13.75□□□□□ -0.21
RPAIN-210ENST00000571613 C14orf144Q96I85 54 aa13.75□□□□□ -0.21
RPAIN-210ENST00000571613 CST9LQ9H4G1 147 aa13.75□□□□□ -0.21
RPAIN-210ENST00000571613 PRO0255Q9UI72 69 aa13.75□□□□□ -0.21
RPAIN-210ENST00000571613 TIMM21Q9BVV7 248 aa13.74□□□□□ -0.21
RPAIN-210ENST00000571613 SLC25A34Q6PIV7 304 aa13.73□□□□□ -0.21
RPAIN-210ENST00000571613 MRPL52Q86TS9 123 aaKnown RBP13.73□□□□□ -0.21
RPAIN-210ENST00000571613 VCX2Q9H322 139 aa13.73□□□□□ -0.21
RPAIN-210ENST00000571613 STPG4Q8N801 248 aa13.72□□□□□ -0.21
RPAIN-210ENST00000571613 IGLV4-3A0A075B6K6 122 aa13.72□□□□□ -0.21
RPAIN-210ENST00000571613 COL6A5A8TX70 2615 aa13.72□□□□□ -0.21
RPAIN-210ENST00000571613 COX8AP10176 69 aa13.72□□□□□ -0.21
RPAIN-210ENST00000571613 HNRNPA3P51991 378 aaKnown RBP13.72□□□□□ -0.21
RPAIN-210ENST00000571613 ZC2HC1BQ5TFG8 222 aa13.72□□□□□ -0.21
RPAIN-210ENST00000571613 UBE2D4Q9Y2X8 147 aa13.72□□□□□ -0.21
RPAIN-210ENST00000571613 H7C423 109 aa13.71□□□□□ -0.21
RPAIN-210ENST00000571613 ATP5G1P05496 136 aa13.71□□□□□ -0.21
RPAIN-210ENST00000571613 ANKRD39Q53RE8 183 aa13.71□□□□□ -0.21
RPAIN-210ENST00000571613 LINC00694P0DN24 101 aa13.7□□□□□ -0.22
RPAIN-210ENST00000571613 DEFB4AO15263 64 aa13.69□□□□□ -0.22
RPAIN-210ENST00000571613 MRPS36P82909 103 aaKnown RBP13.69□□□□□ -0.22
RPAIN-210ENST00000571613 MRPS16Q9Y3D3 137 aaKnown RBP13.69□□□□□ -0.22
RPAIN-210ENST00000571613 CSDC2Q9Y534 153 aaKnown RBP13.69□□□□□ -0.22
RPAIN-210ENST00000571613 TRBV25-1A0A075B6N4 114 aa13.69□□□□□ -0.22
RPAIN-210ENST00000571613 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-210ENST00000571613 IGKV2-29A2NJV5 120 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-210ENST00000571613 DGAT2L7PQ6IED9 249 aa13.69□□□□□ -0.22
RPAIN-210ENST00000571613 AMELXQ99217 191 aa13.69□□□□□ -0.22
RPAIN-210ENST00000571613 DLEU1O43261 78 aa13.68□□□□□ -0.22
RPAIN-210ENST00000571613 PAX4O43316 350 aa13.68□□□□□ -0.22
RPAIN-210ENST00000571613 TMEM243Q9BU79 118 aa13.68□□□□□ -0.22
RPAIN-210ENST00000571613 LOC100131303A0A0U1RQF7 123 aa13.67□□□□□ -0.22
RPAIN-210ENST00000571613 NTM-AS1Q6ZSK4 140 aa13.67□□□□□ -0.22
RPAIN-210ENST00000571613 C2orf88Q9BSF0 95 aa13.67□□□□□ -0.22
RPAIN-210ENST00000571613 C11orf68Q9H3H3 251 aaKnown RBP13.67□□□□□ -0.22
RPAIN-210ENST00000571613 IGLV4-69A0A075B6H9 119 aa13.66□□□□□ -0.22
RPAIN-210ENST00000571613 UBE2L6O14933 153 aa13.66□□□□□ -0.22
RPAIN-210ENST00000571613 GYPEP15421 78 aa13.66□□□□□ -0.22
RPAIN-210ENST00000571613 HERVK_113P61574 105 aa13.66□□□□□ -0.22
RPAIN-210ENST00000571613 KPRPQ5T749 579 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-210ENST00000571613 NFE4Q86UQ8 179 aa13.66□□□□□ -0.22
RPAIN-210ENST00000571613 MDFIQ99750 246 aa13.66□□□□□ -0.22
RPAIN-210ENST00000571613 CMYA5Q8N3K9 4069 aa13.66□□□□□ -0.22
RPAIN-210ENST00000571613 NMUP48645 174 aa13.66□□□□□ -0.22
RPAIN-210ENST00000571613 SBSPONQ8IVN8 264 aa13.66□□□□□ -0.22
RPAIN-210ENST00000571613 BOD1L2Q8IYS8 172 aa13.66□□□□□ -0.22
RPAIN-210ENST00000571613 ATP6V0E2Q8NHE4 81 aa13.66□□□□□ -0.22
RPAIN-210ENST00000571613 OPRPNQ99935 248 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-210ENST00000571613 CELA1Q9UNI1 258 aa13.66□□□□□ -0.22
RPAIN-210ENST00000571613 M0R143 59 aa13.65□□□□□ -0.22
RPAIN-210ENST00000571613 LBHQ53QV2 105 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-210ENST00000571613 TRBV6-8A0A0A6YYG3 113 aa13.64□□□□□ -0.23
RPAIN-210ENST00000571613 SIVA1O15304 175 aa13.64□□□□□ -0.23
RPAIN-210ENST00000571613 C11orf86A6NJI1 115 aa13.63□□□□□ -0.23
RPAIN-210ENST00000571613 FGF6P10767 208 aa13.63□□□□□ -0.23
RPAIN-210ENST00000571613 ZNF25P17030 456 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-210ENST00000571613 CTAG1AP78358 180 aa13.63□□□□□ -0.23
RPAIN-210ENST00000571613 TMEM101Q96IK0 257 aa13.63□□□□□ -0.23
RPAIN-210ENST00000571613 AMMECR1LQ6DCA0 310 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms