RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 HIST1H2BCP62807 126 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 UBE2D2P62837 147 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 RPL32P62910 135 aaKnown RBP9.48□□□□□ -0.89
RPAIN-209ENST00000571558 RPL36AP83881 106 aaKnown RBP9.48□□□□□ -0.89
RPAIN-209ENST00000571558 HIST2H2BEQ16778 126 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.48□□□□□ -0.89
RPAIN-209ENST00000571558 ZNRF2Q8NHG8 242 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 HIST1H2BHQ93079 126 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 RPL36ALQ969Q0 106 aaKnown RBP9.48□□□□□ -0.89
RPAIN-209ENST00000571558 HIST1H2BNQ99877 126 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 HIST1H2BMQ99879 126 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 ST20Q9HBF5 79 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 TNFRSF18Q9Y5U5 241 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 IGLV2-18A0A075B6J9 118 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 TRBV27A0A0K0K1C4 114 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 GAGE12JA6NER3 117 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 SDHAF1A6NFY7 115 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 C1orf196B1AJZ1 125 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 GAGE1Q13065 139 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 GAGE4Q13068 117 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 GAGE5Q13069 117 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 GAGE13Q4V321 117 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 Q0VG73 95 aa9.47□□□□□ -0.89
RPAIN-209ENST00000571558 IQCJQ1A5X6 159 aa9.47□□□□□ -0.89
RPAIN-209ENST00000571558 SMIM2Q9BVW6 85 aa9.47□□□□□ -0.89
RPAIN-209ENST00000571558 MAP1LC3AQ9H492 121 aa9.47□□□□□ -0.89
RPAIN-209ENST00000571558 A0A096LPF7 62 aa9.46□□□□□ -0.9
RPAIN-209ENST00000571558 URB1-AS1Q96HZ7 61 aa9.46□□□□□ -0.9
RPAIN-209ENST00000571558 LOC389332A0A1B0GUA5 103 aa9.45□□□□□ -0.9
RPAIN-209ENST00000571558 VCYO14598 125 aa9.45□□□□□ -0.9
RPAIN-209ENST00000571558 RAB5BP61020 215 aa9.45□□□□□ -0.9
RPAIN-209ENST00000571558 MRPL23Q16540 153 aaKnown RBP9.45□□□□□ -0.9
RPAIN-209ENST00000571558 NEGR1Q7Z3B1 354 aa9.45□□□□□ -0.9
RPAIN-209ENST00000571558 DAZ4Q86SG3 579 aaKnown RBP9.45□□□□□ -0.9
RPAIN-209ENST00000571558 Q8N8P6 123 aa9.45□□□□□ -0.9
RPAIN-209ENST00000571558 DAZ3Q9NR90 486 aaKnown RBP9.45□□□□□ -0.9
RPAIN-209ENST00000571558 ICOSQ9Y6W8 199 aa9.45□□□□□ -0.9
RPAIN-209ENST00000571558 LINC01546A6NGU7 62 aa9.44□□□□□ -0.9
RPAIN-209ENST00000571558 IFI27P40305 119 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-209ENST00000571558 NXT2Q9NPJ8 142 aaKnown RBP9.44□□□□□ -0.9
RPAIN-209ENST00000571558 DMBT1Q9UGM3 2413 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-209ENST00000571558 LRP1BQ9NZR2 4599 aa9.43□□□□□ -0.9
RPAIN-209ENST00000571558 IGHV3-38A0A0C4DH36 116 aa9.43□□□□□ -0.9
RPAIN-209ENST00000571558 I3L3M4 83 aa9.43□□□□□ -0.9
RPAIN-209ENST00000571558 TSHBP01222 138 aa9.43□□□□□ -0.9
RPAIN-209ENST00000571558 PMCHP20382 165 aa9.43□□□□□ -0.9
RPAIN-209ENST00000571558 LINC00310P59036 64 aa9.43□□□□□ -0.9
RPAIN-209ENST00000571558 C15orf53Q8NAA6 179 aa9.43□□□□□ -0.9
RPAIN-209ENST00000571558 TNP2Q05952 138 aa9.42□□□□□ -0.9
RPAIN-209ENST00000571558 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
RPAIN-209ENST00000571558 NTM-AS1Q6ZSK4 140 aa9.42□□□□□ -0.9
RPAIN-209ENST00000571558 SH2D6Q7Z4S9 175 aa9.42□□□□□ -0.9
RPAIN-209ENST00000571558 NIT1Q86X76 327 aa9.42□□□□□ -0.9
RPAIN-209ENST00000571558 ATP6V0E2Q8NHE4 81 aa9.42□□□□□ -0.9
RPAIN-209ENST00000571558 PRSS3P2Q8NHM4 247 aa9.42□□□□□ -0.9
RPAIN-209ENST00000571558 NUDT3O95989 172 aa9.41□□□□□ -0.9
RPAIN-209ENST00000571558 DEFB104AQ8WTQ1 72 aa9.41□□□□□ -0.9
RPAIN-209ENST00000571558 APOBP04114 4563 aaKnown RBP9.41□□□□□ -0.9
RPAIN-209ENST00000571558 K7EMI3 77 aa9.4□□□□□ -0.9
RPAIN-209ENST00000571558 TCAPO15273 167 aa9.4□□□□□ -0.9
RPAIN-209ENST00000571558 LINC00614P0C842 121 aa9.4□□□□□ -0.9
RPAIN-209ENST00000571558 BAGE3Q86Y29 109 aa9.4□□□□□ -0.9
RPAIN-209ENST00000571558 KIR2DL4Q99706 377 aa9.4□□□□□ -0.9
RPAIN-209ENST00000571558 GTSF1LQ9H1H1 148 aa9.4□□□□□ -0.9
RPAIN-209ENST00000571558 SERF1AO75920 110 aa9.39□□□□□ -0.91
RPAIN-209ENST00000571558 TIRAPP58753 221 aa9.39□□□□□ -0.91
RPAIN-209ENST00000571558 COTL1Q14019 142 aa9.39□□□□□ -0.91
RPAIN-209ENST00000571558 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
RPAIN-209ENST00000571558 LYPD5Q6UWN5 251 aa9.39□□□□□ -0.91
RPAIN-209ENST00000571558 FA2HQ7L5A8 372 aa9.39□□□□□ -0.91
RPAIN-209ENST00000571558 C6orf223Q8N319 242 aa9.39□□□□□ -0.91
RPAIN-209ENST00000571558 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
RPAIN-209ENST00000571558 TRBV6-8A0A0A6YYG3 113 aa9.39□□□□□ -0.91
RPAIN-209ENST00000571558 NUPR1O60356 82 aa9.39□□□□□ -0.91
RPAIN-209ENST00000571558 ESDP10768 282 aa9.39□□□□□ -0.91
RPAIN-209ENST00000571558 RNASEKQ6P5S7 137 aaKnown RBP9.39□□□□□ -0.91
RPAIN-209ENST00000571558 AP5S1Q9NUS5 200 aa9.39□□□□□ -0.91
RPAIN-209ENST00000571558 NBDYA0A0U1RRE5 68 aa9.38□□□□□ -0.91
RPAIN-209ENST00000571558 LOC105371267A0A1B0GV96 52 aa9.38□□□□□ -0.91
RPAIN-209ENST00000571558 FCER1GP30273 86 aa9.38□□□□□ -0.91
RPAIN-209ENST00000571558 NDUFA6P56556 154 aa9.38□□□□□ -0.91
RPAIN-209ENST00000571558 LAGE3Q14657 143 aa9.38□□□□□ -0.91
RPAIN-209ENST00000571558 ESRGQ1W209 222 aa9.38□□□□□ -0.91
RPAIN-209ENST00000571558 TMEM97Q5BJF2 176 aa9.38□□□□□ -0.91
RPAIN-209ENST00000571558 CHCHD7Q9BUK0 85 aa9.38□□□□□ -0.91
RPAIN-209ENST00000571558 DNAH5Q8TE73 4624 aa9.37□□□□□ -0.91
RPAIN-209ENST00000571558 A0A096LNJ9 63 aa9.37□□□□□ -0.91
RPAIN-209ENST00000571558 ORMDL2Q53FV1 153 aa9.37□□□□□ -0.91
RPAIN-209ENST00000571558 IGHV1-24A0A0C4DH33 117 aa9.36□□□□□ -0.91
RPAIN-209ENST00000571558 S100A6P06703 90 aa9.36□□□□□ -0.91
RPAIN-209ENST00000571558 AMTP48728 403 aa9.36□□□□□ -0.91
RPAIN-209ENST00000571558 LELP1Q5T871 98 aa9.36□□□□□ -0.91
RPAIN-209ENST00000571558 TRBV25-1A0A075B6N4 114 aa9.35□□□□□ -0.91
RPAIN-209ENST00000571558 C20orf203Q8NBC4 194 aa9.35□□□□□ -0.91
RPAIN-209ENST00000571558 EPM2AB3EWF7 344 aa9.34□□□□□ -0.91
RPAIN-209ENST00000571558 PMCHL1Q16048 86 aa9.34□□□□□ -0.91
RPAIN-209ENST00000571558 C5orf52A6NGY3 159 aa9.33□□□□□ -0.92
RPAIN-209ENST00000571558 HSBP1O75506 76 aa9.33□□□□□ -0.92
RPAIN-209ENST00000571558 SPATA12Q7Z6I5 190 aa9.33□□□□□ -0.92
RPAIN-209ENST00000571558 TMEM243Q9BU79 118 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms