RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 PGLYRP4Q96LB8 373 aa8.89□□□□□ -0.99
PRPF8-202ENST00000571346 CNFNQ9BYD5 112 aa8.89□□□□□ -0.99
PRPF8-202ENST00000571346 GATCO43716 136 aaKnown RBP8.88□□□□□ -0.99
PRPF8-202ENST00000571346 GTSF1Q8WW33 167 aa8.88□□□□□ -0.99
PRPF8-202ENST00000571346 CHAC1Q9BUX1 264 aa8.88□□□□□ -0.99
PRPF8-202ENST00000571346 PKHD1L1Q86WI1 4243 aa8.88□□□□□ -0.99
PRPF8-202ENST00000571346 IGLV4-60A0A075B6I1 120 aa8.87□□□□□ -0.99
PRPF8-202ENST00000571346 PRSS1P07477 247 aa8.87□□□□□ -0.99
PRPF8-202ENST00000571346 WDR73Q6P4I2 378 aa8.87□□□□□ -0.99
PRPF8-202ENST00000571346 C20orf203Q8NBC4 194 aa8.87□□□□□ -0.99
PRPF8-202ENST00000571346 EIF5A2Q9GZV4 153 aaKnown RBP8.87□□□□□ -0.99
PRPF8-202ENST00000571346 GATD1Q8NB37 220 aa8.86□□□□□ -0.99
PRPF8-202ENST00000571346 CIRBP-AS1Q8TBR5 109 aa8.86□□□□□ -0.99
PRPF8-202ENST00000571346 RPL39LQ96EH5 51 aaKnown RBP8.86□□□□□ -0.99
PRPF8-202ENST00000571346 SMIM7Q9BQ49 75 aa8.86□□□□□ -0.99
PRPF8-202ENST00000571346 GFRA4Q9GZZ7 299 aa8.86□□□□□ -0.99
PRPF8-202ENST00000571346 IGKV3OR2-268A0A0C4DH90 116 aa8.85□□□□□ -0.99
PRPF8-202ENST00000571346 FOXA3P55318 350 aaPredicted RBP8.85□□□□□ -0.99
PRPF8-202ENST00000571346 BORCS7Q96B45 105 aa8.85□□□□□ -0.99
PRPF8-202ENST00000571346 TRAV8-4A0A0B4J246 113 aa8.84□□□□□ -0.99
PRPF8-202ENST00000571346 A0A1B0GUV1 79 aa8.84□□□□□ -0.99
PRPF8-202ENST00000571346 hDV102S1A0JD36 115 aa8.84□□□□□ -0.99
PRPF8-202ENST00000571346 A8MWL6 223 aa8.84□□□□□ -0.99
PRPF8-202ENST00000571346 J3QL48 77 aa8.84□□□□□ -0.99
PRPF8-202ENST00000571346 APCSP02743 223 aa8.84□□□□□ -0.99
PRPF8-202ENST00000571346 KRTAP26-1Q6PEX3 210 aa8.84□□□□□ -0.99
PRPF8-202ENST00000571346 FAM231DQ6ZW35 169 aa8.84□□□□□ -0.99
PRPF8-202ENST00000571346 LYPD6BQ8NI32 183 aa8.84□□□□□ -0.99
PRPF8-202ENST00000571346 FAT3Q8TDW7 4589 aa8.84□□□□□ -0.99
PRPF8-202ENST00000571346 CT83Q5H943 113 aa8.83□□□□□ -1
PRPF8-202ENST00000571346 AMMECR1LQ6DCA0 310 aa8.83□□□□□ -1
PRPF8-202ENST00000571346 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.82□□□□□ -1
PRPF8-202ENST00000571346 IGKV2-29A2NJV5 120 aaPredicted RBP8.82□□□□□ -1
PRPF8-202ENST00000571346 SDHAF1A6NFY7 115 aa8.82□□□□□ -1
PRPF8-202ENST00000571346 ZNF727A8MUV8 499 aa8.82□□□□□ -1
PRPF8-202ENST00000571346 DGAT2L7PQ6IED9 249 aa8.82□□□□□ -1
PRPF8-202ENST00000571346 RNASEKQ6P5S7 137 aaKnown RBP8.82□□□□□ -1
PRPF8-202ENST00000571346 TEX261Q6UWH6 196 aa8.82□□□□□ -1
PRPF8-202ENST00000571346 LINC01551Q86U37 167 aa8.82□□□□□ -1
PRPF8-202ENST00000571346 FAM210AQ96ND0 272 aa8.82□□□□□ -1
PRPF8-202ENST00000571346 LRP1Q07954 4544 aaKnown RBP8.81□□□□□ -1
PRPF8-202ENST00000571346 HIGD1CA8MV81 97 aa8.81□□□□□ -1
PRPF8-202ENST00000571346 C9orf163Q8N9P6 203 aa8.81□□□□□ -1
PRPF8-202ENST00000571346 CLRN3Q8NCR9 226 aa8.81□□□□□ -1
PRPF8-202ENST00000571346 AP5S1Q9NUS5 200 aa8.81□□□□□ -1
PRPF8-202ENST00000571346 GAGE12HA6NDE8 117 aa8.8□□□□□ -1
PRPF8-202ENST00000571346 NCR2O95944 276 aa8.8□□□□□ -1
PRPF8-202ENST00000571346 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.8□□□□□ -1
PRPF8-202ENST00000571346 A0A1B0GUT8 65 aa8.79□□□□□ -1
PRPF8-202ENST00000571346 SRP19P09132 144 aaKnown RBP8.79□□□□□ -1
PRPF8-202ENST00000571346 CNBPP62633 177 aaKnown RBP8.79□□□□□ -1
PRPF8-202ENST00000571346 TSKUQ8WUA8 353 aa8.79□□□□□ -1
PRPF8-202ENST00000571346 TMEM242Q9NWH2 141 aa8.79□□□□□ -1
PRPF8-202ENST00000571346 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.78□□□□□ -1
PRPF8-202ENST00000571346 I3L3M4 83 aa8.78□□□□□ -1
PRPF8-202ENST00000571346 FGF6P10767 208 aa8.78□□□□□ -1
PRPF8-202ENST00000571346 PMCHP20382 165 aa8.78□□□□□ -1
PRPF8-202ENST00000571346 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
PRPF8-202ENST00000571346 ST20Q9HBF5 79 aa8.78□□□□□ -1
PRPF8-202ENST00000571346 PANO1I0J062 215 aa8.77□□□□□ -1.01
PRPF8-202ENST00000571346 GAS8-AS1O95177 125 aa8.77□□□□□ -1.01
PRPF8-202ENST00000571346 HIGD2BQ4VC39 106 aa8.77□□□□□ -1.01
PRPF8-202ENST00000571346 CHCHD10Q8WYQ3 142 aaPredicted RBP8.77□□□□□ -1.01
PRPF8-202ENST00000571346 BTF3L4Q96K17 158 aa8.77□□□□□ -1.01
PRPF8-202ENST00000571346 TMEM191AQ9H0A3 160 aa8.77□□□□□ -1.01
PRPF8-202ENST00000571346 OSTCQ9NRP0 149 aa8.77□□□□□ -1.01
PRPF8-202ENST00000571346 IGHV3-64A0A075B6Q5 118 aa8.76□□□□□ -1.01
PRPF8-202ENST00000571346 H7C423 109 aa8.76□□□□□ -1.01
PRPF8-202ENST00000571346 NDUFS6O75380 124 aaKnown RBP8.76□□□□□ -1.01
PRPF8-202ENST00000571346 KRTAP10-4P60372 401 aaPredicted RBP8.76□□□□□ -1.01
PRPF8-202ENST00000571346 ADIRFQ15847 76 aa8.76□□□□□ -1.01
PRPF8-202ENST00000571346 AMN1Q8IY45 258 aa8.76□□□□□ -1.01
PRPF8-202ENST00000571346 C15orf56Q8N910 161 aa8.76□□□□□ -1.01
PRPF8-202ENST00000571346 MRAP2Q96G30 205 aa8.76□□□□□ -1.01
PRPF8-202ENST00000571346 TMEM101Q96IK0 257 aa8.76□□□□□ -1.01
PRPF8-202ENST00000571346 TRBV6-5A0A0K0K1A5 114 aa8.75□□□□□ -1.01
PRPF8-202ENST00000571346 FAM231BA6NCW3 169 aa8.75□□□□□ -1.01
PRPF8-202ENST00000571346 TSHBP01222 138 aa8.75□□□□□ -1.01
PRPF8-202ENST00000571346 CHTF8P0CG12 524 aa8.75□□□□□ -1.01
PRPF8-202ENST00000571346 ZNF25P17030 456 aaPredicted RBP8.75□□□□□ -1.01
PRPF8-202ENST00000571346 RPS10P46783 165 aaKnown RBP8.75□□□□□ -1.01
PRPF8-202ENST00000571346 CFAP161Q6P656 301 aa8.75□□□□□ -1.01
PRPF8-202ENST00000571346 SDIM1Q6ZPB5 146 aa8.75□□□□□ -1.01
PRPF8-202ENST00000571346 OR5A1Q8NGJ0 315 aa8.75□□□□□ -1.01
PRPF8-202ENST00000571346 ISOC2Q96AB3 205 aa8.75□□□□□ -1.01
PRPF8-202ENST00000571346 V9GYV3 84 aa8.75□□□□□ -1.01
PRPF8-202ENST00000571346 SMKR1H3BMG3 65 aa8.74□□□□□ -1.01
PRPF8-202ENST00000571346 SLPIP03973 132 aa8.74□□□□□ -1.01
PRPF8-202ENST00000571346 XCL1P47992 114 aa8.74□□□□□ -1.01
PRPF8-202ENST00000571346 RIGQ13278 110 aa8.74□□□□□ -1.01
PRPF8-202ENST00000571346 NUP35Q8NFH5 326 aa8.74□□□□□ -1.01
PRPF8-202ENST00000571346 RNF185Q96GF1 192 aa8.74□□□□□ -1.01
PRPF8-202ENST00000571346 C7orf77A4D0Y5 90 aa8.73□□□□□ -1.01
PRPF8-202ENST00000571346 KRTAP29-1A8MX34 341 aaPredicted RBP8.73□□□□□ -1.01
PRPF8-202ENST00000571346 RAB4AP20338 218 aa8.73□□□□□ -1.01
PRPF8-202ENST00000571346 RPL23P62829 140 aaKnown RBP8.73□□□□□ -1.01
PRPF8-202ENST00000571346 TMEM241Q24JQ0 296 aa8.73□□□□□ -1.01
PRPF8-202ENST00000571346 FAM74A3Q4VXF1 159 aa8.73□□□□□ -1.01
PRPF8-202ENST00000571346 DPH3Q96FX2 82 aa8.73□□□□□ -1.01
PRPF8-202ENST00000571346 NAT8Q9UHE5 227 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms