RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 TCL1AP56279 114 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 RPS20P60866 119 aaKnown RBP4.55□□□□□ -1.68
CHD3-213ENST00000571249 HBBP68871 147 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 C6orf226Q5I0X4 101 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 OR10J3Q5JRS4 329 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 FAM162BQ5T6X4 162 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 RNASEKQ6P5S7 137 aaKnown RBP4.55□□□□□ -1.68
CHD3-213ENST00000571249 OR2D3Q8NGH3 330 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 C8orf49Q96NF6 230 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 HIST1H2BLQ99880 126 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 VGLL1Q99990 258 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 CNFNQ9BYD5 112 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 AGPAT4-IT1Q9H0P7 198 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 GEMIN7Q9H840 131 aaKnown RBP4.55□□□□□ -1.68
CHD3-213ENST00000571249 NRN1Q9NPD7 142 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 TP53TG3Q9ULZ0 132 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 FABP5P3A8MUU1 101 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 SH2D1AO60880 128 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 APCSP02743 223 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 IGLC6P0CF74 106 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 S100A2P29034 98 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 CTRLP40313 264 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 ZNF80P51504 273 aaPredicted RBP4.54□□□□□ -1.68
CHD3-213ENST00000571249 ZNF138P52744 262 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 HIST1H1AQ02539 215 aaPredicted RBP4.54□□□□□ -1.68
CHD3-213ENST00000571249 IGFL4Q6B9Z1 124 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 MRPL54Q6P161 138 aaKnown RBP4.54□□□□□ -1.68
CHD3-213ENST00000571249 FOXI2Q6ZQN5 318 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 ZNF493Q6ZR52 646 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 FAM19A4Q96LR4 140 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 LINC00477Q96M19 166 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 C12orf57Q99622 126 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 NDFIP1Q9BT67 221 aa4.54□□□□□ -1.68
CHD3-213ENST00000571249 A0A1B0GUT8 65 aa4.53□□□□□ -1.68
CHD3-213ENST00000571249 TSPOP30536 169 aa4.53□□□□□ -1.68
CHD3-213ENST00000571249 SLAQ13239 276 aa4.53□□□□□ -1.68
CHD3-213ENST00000571249 RIGQ13278 110 aa4.53□□□□□ -1.68
CHD3-213ENST00000571249 TMEM78Q5T7P6 136 aa4.53□□□□□ -1.68
CHD3-213ENST00000571249 RNF182Q8N6D2 247 aa4.53□□□□□ -1.68
CHD3-213ENST00000571249 NEXN-AS1Q8NBZ9 246 aa4.53□□□□□ -1.68
CHD3-213ENST00000571249 OR10J6PQ8NGY7 276 aa4.53□□□□□ -1.68
CHD3-213ENST00000571249 PGLYRP4Q96LB8 373 aa4.53□□□□□ -1.68
CHD3-213ENST00000571249 C20orf173Q96LM9 149 aa4.53□□□□□ -1.68
CHD3-213ENST00000571249 DPH3P1Q9H4G8 78 aa4.53□□□□□ -1.68
CHD3-213ENST00000571249 NOP10Q9NPE3 64 aaKnown RBP4.53□□□□□ -1.68
CHD3-213ENST00000571249 F6UB75 175 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 NUPR1O60356 82 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 SPINK4O60575 86 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 FABP4P15090 132 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 EVI2AP22794 236 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 SRIP30626 198 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 ID1P41134 155 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 S100A12P80511 92 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 ERCC8Q13216 396 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 JOSD1Q15040 202 aaPredicted RBP4.52□□□□□ -1.69
CHD3-213ENST00000571249 PYY3Q5JQD4 70 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 TMEM256Q8N2U0 113 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 OR10D4PQ8NGN7 298 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 Q8TAT8 98 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 C18orf32Q8TCD1 76 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 VSIG2Q96IQ7 327 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 ODF3Q96PU9 254 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 LINC00467Q9BRT7 94 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 C11orf21Q9P2W6 132 aa4.52□□□□□ -1.69
CHD3-213ENST00000571249 TIMM8BQ9Y5J9 83 aaPredicted RBP4.52□□□□□ -1.69
CHD3-213ENST00000571249 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
CHD3-213ENST00000571249 GRIFINA4D1Z8 144 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 F2Z2F3 143 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 PANO1I0J062 215 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 SERF1AO75920 110 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 ARMS2P0C7Q2 107 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 GZMBP10144 247 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 HTN1P15515 57 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 RAB4BP61018 213 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 WFDC2Q14508 124 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 EBLN2Q6P2I7 272 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 LYPD5Q6UWN5 251 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 LYZL1Q6UWQ5 148 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 ZFAND2AQ8N6M9 145 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 ZNF738Q8NE65 137 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 OR8A1Q8NGG7 326 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 PRSS3P2Q8NHM4 247 aa4.51□□□□□ -1.69
CHD3-213ENST00000571249 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.5□□□□□ -1.69
CHD3-213ENST00000571249 IGKV3D-20A0A0C4DH25 116 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 A8MTW9 85 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 KLLNB2CW77 178 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 K7EP13 123 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 CRXO43186 299 aaPredicted RBP4.5□□□□□ -1.69
CHD3-213ENST00000571249 SNAI2O43623 268 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 INSP01308 110 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 GPX1P07203 203 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 OR5AL1P0C617 328 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 KIAA1644Q3SXP7 199 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 PDZD11Q5EBL8 140 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 C10orf25Q5T742 122 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 BAGE3Q86Y29 109 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 FER1L6-AS1Q8NA97 138 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 BORCS7Q96B45 105 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 KCNS1Q96KK3 526 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 LINC01600Q96MT4 127 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms