RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 RPL35P42766 123 aaKnown RBP2.57□□□□□ -2
NUP88-202ENST00000570937 GNG5P63218 68 aa2.57□□□□□ -2
NUP88-202ENST00000570937 ZNF726P1Q15940 193 aa2.57□□□□□ -2
NUP88-202ENST00000570937 TMEM183BQ1AE95 376 aa2.57□□□□□ -2
NUP88-202ENST00000570937 SOHLH1Q5JUK2 328 aa2.57□□□□□ -2
NUP88-202ENST00000570937 FAM162BQ5T6X4 162 aa2.57□□□□□ -2
NUP88-202ENST00000570937 Q6ZTI0 123 aa2.57□□□□□ -2
NUP88-202ENST00000570937 TMEM183AQ8IXX5 376 aa2.57□□□□□ -2
NUP88-202ENST00000570937 C11orf72Q8NBR9 251 aa2.57□□□□□ -2
NUP88-202ENST00000570937 TPPP3Q9BW30 176 aa2.57□□□□□ -2
NUP88-202ENST00000570937 MANBALQ9NQG1 85 aa2.57□□□□□ -2
NUP88-202ENST00000570937 NIT2Q9NQR4 276 aa2.57□□□□□ -2
NUP88-202ENST00000570937 PRO0255Q9UI72 69 aa2.57□□□□□ -2
NUP88-202ENST00000570937 HHLA3Q9XRX5 114 aa2.57□□□□□ -2
NUP88-202ENST00000570937 HYDINQ4G0P3 5121 aa2.57□□□□□ -2
NUP88-202ENST00000570937 TRBV6-1A0A0K0K1D8 114 aa2.56□□□□□ -2
NUP88-202ENST00000570937 A0A1B0GV50 99 aa2.56□□□□□ -2
NUP88-202ENST00000570937 C9JCJ5 164 aa2.56□□□□□ -2
NUP88-202ENST00000570937 GNRH2O43555 120 aa2.56□□□□□ -2
NUP88-202ENST00000570937 LTAP01374 205 aa2.56□□□□□ -2
NUP88-202ENST00000570937 ORM1P02763 201 aa2.56□□□□□ -2
NUP88-202ENST00000570937 ASIPP42127 132 aa2.56□□□□□ -2
NUP88-202ENST00000570937 AKR1C3P42330 323 aa2.56□□□□□ -2
NUP88-202ENST00000570937 SULT1A2P50226 295 aa2.56□□□□□ -2
NUP88-202ENST00000570937 RPS20P60866 119 aaKnown RBP2.56□□□□□ -2
NUP88-202ENST00000570937 PRR9Q5T870 116 aa2.56□□□□□ -2
NUP88-202ENST00000570937 UFSP1Q6NVU6 142 aa2.56□□□□□ -2
NUP88-202ENST00000570937 BAGE2Q86Y30 109 aa2.56□□□□□ -2
NUP88-202ENST00000570937 OR4C5Q8NGB2 326 aa2.56□□□□□ -2
NUP88-202ENST00000570937 PTH2Q96A98 100 aa2.56□□□□□ -2
NUP88-202ENST00000570937 MRPL16Q9NX20 251 aaKnown RBP2.56□□□□□ -2
NUP88-202ENST00000570937 GNG13Q9P2W3 67 aa2.56□□□□□ -2
NUP88-202ENST00000570937 STARD9Q9P2P6 4700 aa2.56□□□□□ -2
NUP88-202ENST00000570937 TRAV4A0A0B4J268 109 aa2.55□□□□□ -2
NUP88-202ENST00000570937 A0A0J9YY99 117 aa2.55□□□□□ -2
NUP88-202ENST00000570937 A0A1B0GV72 72 aa2.55□□□□□ -2
NUP88-202ENST00000570937 A8MWV9 139 aa2.55□□□□□ -2
NUP88-202ENST00000570937 B4DEV8 164 aa2.55□□□□□ -2
NUP88-202ENST00000570937 TSTD3H0UI37 97 aa2.55□□□□□ -2
NUP88-202ENST00000570937 SCO1O75880 301 aa2.55□□□□□ -2
NUP88-202ENST00000570937 TYMSP04818 313 aa2.55□□□□□ -2
NUP88-202ENST00000570937 SRIP30626 198 aa2.55□□□□□ -2
NUP88-202ENST00000570937 GNG4P50150 75 aa2.55□□□□□ -2
NUP88-202ENST00000570937 ZNF80P51504 273 aaPredicted RBP2.55□□□□□ -2
NUP88-202ENST00000570937 PKIAP61925 76 aa2.55□□□□□ -2
NUP88-202ENST00000570937 MEF2BQ02080 365 aaPredicted RBP2.55□□□□□ -2
NUP88-202ENST00000570937 MRPL23Q16540 153 aaKnown RBP2.55□□□□□ -2
NUP88-202ENST00000570937 TTC32Q5I0X7 151 aa2.55□□□□□ -2
NUP88-202ENST00000570937 TEX261Q6UWH6 196 aa2.55□□□□□ -2
NUP88-202ENST00000570937 Q86TA4 180 aa2.55□□□□□ -2
NUP88-202ENST00000570937 COMMD7Q86VX2 200 aa2.55□□□□□ -2
NUP88-202ENST00000570937 MTURNQ8N3F0 131 aa2.55□□□□□ -2
NUP88-202ENST00000570937 C9orf62Q8N4C0 152 aa2.55□□□□□ -2
NUP88-202ENST00000570937 TVP23CQ96ET8 276 aa2.55□□□□□ -2
NUP88-202ENST00000570937 SMIM12Q96EX1 92 aa2.55□□□□□ -2
NUP88-202ENST00000570937 IL36BQ9NZH7 164 aa2.55□□□□□ -2
NUP88-202ENST00000570937 VAX2Q9UIW0 290 aa2.55□□□□□ -2
NUP88-202ENST00000570937 PHLDA3Q9Y5J5 127 aa2.55□□□□□ -2
NUP88-202ENST00000570937 ICOSQ9Y6W8 199 aa2.55□□□□□ -2
NUP88-202ENST00000570937 SACSQ9NZJ4 4579 aa2.55□□□□□ -2
NUP88-202ENST00000570937 PLECQ15149 4684 aaKnown RBP2.54□□□□□ -2
NUP88-202ENST00000570937 TRBV6-4A0A1B0GX49 114 aa2.54□□□□□ -2
NUP88-202ENST00000570937 F8WDY8 70 aa2.54□□□□□ -2
NUP88-202ENST00000570937 M0R036 132 aa2.54□□□□□ -2
NUP88-202ENST00000570937 SH2D1AO60880 128 aa2.54□□□□□ -2
NUP88-202ENST00000570937 IGHV3-53P01767 116 aa2.54□□□□□ -2
NUP88-202ENST00000570937 BCL2P10415 239 aa2.54□□□□□ -2
NUP88-202ENST00000570937 MGST1P10620 155 aaKnown RBP2.54□□□□□ -2
NUP88-202ENST00000570937 DDTP30046 118 aa2.54□□□□□ -2
NUP88-202ENST00000570937 CRYBA4P53673 196 aa2.54□□□□□ -2
NUP88-202ENST00000570937 RAB5BP61020 215 aa2.54□□□□□ -2
NUP88-202ENST00000570937 CCL20P78556 96 aa2.54□□□□□ -2
NUP88-202ENST00000570937 C1orf134Q5TEV5 83 aa2.54□□□□□ -2
NUP88-202ENST00000570937 ZFP2Q6ZN57 461 aa2.54□□□□□ -2
NUP88-202ENST00000570937 Q6ZQT7 251 aa2.54□□□□□ -2
NUP88-202ENST00000570937 LINC00336Q6ZUF6 198 aa2.54□□□□□ -2
NUP88-202ENST00000570937 NEGR1Q7Z3B1 354 aa2.54□□□□□ -2
NUP88-202ENST00000570937 ZFP82Q8N141 532 aa2.54□□□□□ -2
NUP88-202ENST00000570937 ZC2HC1AQ96GY0 325 aa2.54□□□□□ -2
NUP88-202ENST00000570937 PACRGQ96M98 296 aaPredicted RBP2.54□□□□□ -2
NUP88-202ENST00000570937 PRADC1Q9BSG0 188 aa2.54□□□□□ -2
NUP88-202ENST00000570937 VCX2Q9H322 139 aa2.54□□□□□ -2
NUP88-202ENST00000570937 DNAH7Q8WXX0 4024 aa2.54□□□□□ -2
NUP88-202ENST00000570937 NACAE9PAV3 2078 aa2.53□□□□□ -2
NUP88-202ENST00000570937 IGLV2-18A0A075B6J9 118 aa2.53□□□□□ -2
NUP88-202ENST00000570937 A0A087WWC5 75 aa2.53□□□□□ -2
NUP88-202ENST00000570937 A0A096LPF7 62 aa2.53□□□□□ -2
NUP88-202ENST00000570937 TRAV8-6A0A0B4J262 113 aa2.53□□□□□ -2
NUP88-202ENST00000570937 NBDYA0A0U1RRE5 68 aa2.53□□□□□ -2
NUP88-202ENST00000570937 RBFOX3A6NFN3 312 aa2.53□□□□□ -2
NUP88-202ENST00000570937 F2Z2F3 143 aa2.53□□□□□ -2
NUP88-202ENST00000570937 TMEM250H0YL14 139 aa2.53□□□□□ -2
NUP88-202ENST00000570937 H3BVH4 76 aa2.53□□□□□ -2
NUP88-202ENST00000570937 M0R2N4 97 aa2.53□□□□□ -2
NUP88-202ENST00000570937 RS1O15537 224 aa2.53□□□□□ -2
NUP88-202ENST00000570937 P01737 135 aa2.53□□□□□ -2
NUP88-202ENST00000570937 CXCL1P09341 107 aa2.53□□□□□ -2
NUP88-202ENST00000570937 SFTA3P0C7M3 94 aa2.53□□□□□ -2
NUP88-202ENST00000570937 ARMS2P0C7Q2 107 aa2.53□□□□□ -2
NUP88-202ENST00000570937 SMIM17P0DL12 118 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms