RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 TTC9CQ8N5M4 171 aa0.34□□□□□ -2.36
CDC27-212ENST00000570818 Q8N8P6 123 aa0.34□□□□□ -2.36
CDC27-212ENST00000570818 FAM213BQ8TBF2 198 aa0.34□□□□□ -2.36
CDC27-212ENST00000570818 PPP3R2Q96LZ3 170 aa0.34□□□□□ -2.36
CDC27-212ENST00000570818 NPVFQ9HCQ7 196 aa0.34□□□□□ -2.36
CDC27-212ENST00000570818 EFCAB10A6NFE3 127 aa0.33□□□□□ -2.36
CDC27-212ENST00000570818 APOC2P02655 101 aa0.33□□□□□ -2.36
CDC27-212ENST00000570818 AKAIN1P0CW23 69 aa0.33□□□□□ -2.36
CDC27-212ENST00000570818 BTG2P78543 158 aa0.33□□□□□ -2.36
CDC27-212ENST00000570818 CFAP126Q5VTH2 177 aa0.33□□□□□ -2.36
CDC27-212ENST00000570818 PXDNQ92626 1479 aa0.33□□□□□ -2.36
CDC27-212ENST00000570818 MBD5Q9P267 1494 aa0.33□□□□□ -2.36
CDC27-212ENST00000570818 ROCK2O75116 1388 aaKnown RBP0.32□□□□□ -2.36
CDC27-212ENST00000570818 TPRP12270 2363 aaKnown RBP0.32□□□□□ -2.36
CDC27-212ENST00000570818 PPIP5K1Q6PFW1 1433 aa0.32□□□□□ -2.36
CDC27-212ENST00000570818 SPAARA0A1B0GVQ0 90 aa0.32□□□□□ -2.36
CDC27-212ENST00000570818 SPINK1P00995 79 aa0.32□□□□□ -2.36
CDC27-212ENST00000570818 IFNGP01579 166 aa0.32□□□□□ -2.36
CDC27-212ENST00000570818 CCL18P55774 89 aa0.32□□□□□ -2.36
CDC27-212ENST00000570818 CATR1Q13166 79 aa0.32□□□□□ -2.36
CDC27-212ENST00000570818 Q5VV11 94 aa0.32□□□□□ -2.36
CDC27-212ENST00000570818 PI4KAP42356 2102 aa0.32□□□□□ -2.36
CDC27-212ENST00000570818 TCHHQ07283 1943 aa0.32□□□□□ -2.36
CDC27-212ENST00000570818 RYR2Q92736 4967 aa0.32□□□□□ -2.36
CDC27-212ENST00000570818 ZMYM4Q5VZL5 1548 aa0.32□□□□□ -2.36
CDC27-212ENST00000570818 SSPOA2VEC9 5147 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 NALCNQ8IZF0 1738 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 CTXND1A0A1B0GTU2 59 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 ZNF815PA8K554 130 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 G3V318 75 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 PIN1P1O15428 100 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 SPAG11BQ08648 103 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 Q5BKY6 102 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 SPAG11AQ6PDA7 123 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 SSBP3-AS1Q7Z2R9 100 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 C8orf59Q8N0T1 100 aaPredicted RBP0.31□□□□□ -2.36
CDC27-212ENST00000570818 LENEPQ9Y5L5 61 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 V9GYH0 126 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 PTPRZ1P23471 2315 aaPredicted RBP0.31□□□□□ -2.36
CDC27-212ENST00000570818 ABCA12Q86UK0 2595 aa0.31□□□□□ -2.36
CDC27-212ENST00000570818 KTN1Q86UP2 1357 aaKnown RBP0.31□□□□□ -2.36
CDC27-212ENST00000570818 ZNF609O15014 1411 aa0.3□□□□□ -2.36
CDC27-212ENST00000570818 HERC1Q15751 4861 aa0.3□□□□□ -2.36
CDC27-212ENST00000570818 MRC1P22897 1456 aa0.3□□□□□ -2.36
CDC27-212ENST00000570818 FAT4Q6V0I7 4981 aa0.3□□□□□ -2.36
CDC27-212ENST00000570818 WNK3Q9BYP7 1800 aa0.3□□□□□ -2.36
CDC27-212ENST00000570818 LOC100130705A0A1B0GUX0 176 aa0.3□□□□□ -2.36
CDC27-212ENST00000570818 M0R135 149 aa0.3□□□□□ -2.36
CDC27-212ENST00000570818 SNAPC5O75971 98 aa0.3□□□□□ -2.36
CDC27-212ENST00000570818 MRPL54Q6P161 138 aaKnown RBP0.3□□□□□ -2.36
CDC27-212ENST00000570818 SMIM4Q8WVI0 70 aa0.3□□□□□ -2.36
CDC27-212ENST00000570818 PP6455Q8WZ26 134 aa0.3□□□□□ -2.36
CDC27-212ENST00000570818 SCN3BQ9NY72 215 aa0.3□□□□□ -2.36
CDC27-212ENST00000570818 CPSF1Q10570 1443 aaKnown RBP0.3□□□□□ -2.36
CDC27-212ENST00000570818 A0A0D9SFI3 127 aa0.29□□□□□ -2.36
CDC27-212ENST00000570818 SPINK8P0C7L1 97 aa0.29□□□□□ -2.36
CDC27-212ENST00000570818 CYP4F30PQ9H0H9 118 aa0.29□□□□□ -2.36
CDC27-212ENST00000570818 CUL7Q14999 1698 aa0.29□□□□□ -2.36
CDC27-212ENST00000570818 POLQO75417 2590 aa0.29□□□□□ -2.36
CDC27-212ENST00000570818 ABCA13Q86UQ4 5058 aa0.29□□□□□ -2.36
CDC27-212ENST00000570818 EPPK1P58107 5090 aaKnown RBP0.28□□□□□ -2.36
CDC27-212ENST00000570818 IGF2RP11717 2491 aa0.28□□□□□ -2.36
CDC27-212ENST00000570818 STAB1Q9NY15 2570 aa0.28□□□□□ -2.36
CDC27-212ENST00000570818 A0A1B0GV90 55 aa0.28□□□□□ -2.36
CDC27-212ENST00000570818 DLEU1O43261 78 aa0.28□□□□□ -2.36
CDC27-212ENST00000570818 C9orf153Q5TBE3 101 aa0.28□□□□□ -2.36
CDC27-212ENST00000570818 PSME4Q14997 1843 aa0.28□□□□□ -2.36
CDC27-212ENST00000570818 BCL9LQ86UU0 1499 aa0.28□□□□□ -2.37
CDC27-212ENST00000570818 F8P00451 2351 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 SSSCA1O60232 199 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 S100A3P33764 101 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 TPPP2P59282 170 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 HAMPP81172 84 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 C5orf38Q86SI9 138 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 MYOZ3Q8TDC0 251 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 MGST2Q99735 147 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 SPANXDQ9BXN6 97 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 DYNLRB1Q9NP97 96 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 RNF213Q63HN8 5207 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 A2ML1A8K2U0 1454 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 PIEZO1Q92508 2521 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 MAST4O15021 2626 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 EIF4G3O43432 1585 aaKnown RBP0.27□□□□□ -2.37
CDC27-212ENST00000570818 KDM3BQ7LBC6 1761 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 PLXNB2O15031 1838 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 ZNF236Q9UL36 1845 aa0.27□□□□□ -2.37
CDC27-212ENST00000570818 AHCTF1Q8WYP5 2266 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 ZFYVE26Q68DK2 2539 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 TRBV7-3A0A075B6L6 115 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 OOSP1A8MZH6 123 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 TNFP01375 233 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 APOC3P02656 99 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 IFITM1P13164 125 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 COX17Q14061 63 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 TMEM170BQ5T4T1 132 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 COMMD6Q7Z4G1 85 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 TSLPQ969D9 159 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 NDUFA4L2Q9NRX3 87 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 PRO0255Q9UI72 69 aa0.26□□□□□ -2.37
CDC27-212ENST00000570818 QRICH2Q9H0J4 1663 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms