RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 HMSDA8MTL9 139 aa5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 IFNA1P01562 189 aa5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 P01737 135 aa5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 GNG4P50150 75 aa5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 RPS20P60866 119 aaKnown RBP5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 CIRBPQ14011 172 aaKnown RBP5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 MANBALQ9NQG1 85 aa5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 NIT2Q9NQR4 276 aa5.46□□□□□ -1.54
CTDNEP1-203ENST00000570385 TRBV20OR9-2A0A075B6H5 130 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 IGKV2-24A0A0C4DH68 120 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 PHOX2AO14813 284 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 TRGC1P0CF51 173 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 COX6A2Q02221 97 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 COTL1Q14019 142 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 ODF1Q14990 250 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 TWIST1Q15672 202 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 Q6ZRU5 148 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 C15orf56Q8N910 161 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 PRSS3P2Q8NHM4 247 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 SPACA4Q8TDM5 124 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 DPH3P1Q9H4G8 78 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 MED9Q9NWA0 146 aa5.45□□□□□ -1.54
CTDNEP1-203ENST00000570385 XKRY2A2RUG3 117 aa5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 F2Z2F3 143 aa5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 FOXA3P55318 350 aaPredicted RBP5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 EIF5AP63241 154 aaKnown RBP5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 MAJINQ3KP22 176 aa5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 WDR73Q6P4I2 378 aa5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 RNASEKQ6P5S7 137 aaKnown RBP5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 GATD1Q8NB37 220 aa5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 NUDT10Q8NFP7 164 aa5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 LYPD6BQ8NI32 183 aa5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 GTSF1Q8WW33 167 aa5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 RPL39LQ96EH5 51 aaKnown RBP5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 NUDT11Q96G61 164 aa5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 PGLYRP4Q96LB8 373 aa5.44□□□□□ -1.54
CTDNEP1-203ENST00000570385 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.43□□□□□ -1.54
CTDNEP1-203ENST00000570385 TRAV1-1A0A0B4J248 108 aa5.43□□□□□ -1.54
CTDNEP1-203ENST00000570385 IGKV2-29A2NJV5 120 aaPredicted RBP5.43□□□□□ -1.54
CTDNEP1-203ENST00000570385 RPS10P46783 165 aaKnown RBP5.43□□□□□ -1.54
CTDNEP1-203ENST00000570385 MEF2BQ02080 365 aaPredicted RBP5.43□□□□□ -1.54
CTDNEP1-203ENST00000570385 AMMECR1LQ6DCA0 310 aa5.43□□□□□ -1.54
CTDNEP1-203ENST00000570385 Q6ZNX1 250 aa5.43□□□□□ -1.54
CTDNEP1-203ENST00000570385 C9orf62Q8N4C0 152 aa5.43□□□□□ -1.54
CTDNEP1-203ENST00000570385 CHCHD10Q8WYQ3 142 aaPredicted RBP5.43□□□□□ -1.54
CTDNEP1-203ENST00000570385 LINC00526Q96FQ7 95 aa5.43□□□□□ -1.54
CTDNEP1-203ENST00000570385 RNASE7Q9H1E1 156 aaKnown RBP5.43□□□□□ -1.54
CTDNEP1-203ENST00000570385 PLAC8Q9NZF1 115 aa5.43□□□□□ -1.54
CTDNEP1-203ENST00000570385 TEX46H3BTG2 121 aa5.42□□□□□ -1.54
CTDNEP1-203ENST00000570385 PDE6DO43924 150 aa5.42□□□□□ -1.54
CTDNEP1-203ENST00000570385 CTRLP40313 264 aa5.42□□□□□ -1.54
CTDNEP1-203ENST00000570385 CFAP161Q6P656 301 aa5.42□□□□□ -1.54
CTDNEP1-203ENST00000570385 C7orf33Q8WU49 177 aa5.42□□□□□ -1.54
CTDNEP1-203ENST00000570385 RNF185Q96GF1 192 aa5.42□□□□□ -1.54
CTDNEP1-203ENST00000570385 K7EN84 100 aa5.41□□□□□ -1.54
CTDNEP1-203ENST00000570385 NDUFS6O75380 124 aaKnown RBP5.41□□□□□ -1.54
CTDNEP1-203ENST00000570385 BCL2P10415 239 aa5.41□□□□□ -1.54
CTDNEP1-203ENST00000570385 FGF6P10767 208 aa5.41□□□□□ -1.54
CTDNEP1-203ENST00000570385 STPG4Q8N801 248 aa5.41□□□□□ -1.54
CTDNEP1-203ENST00000570385 OCC1Q8TAD7 63 aa5.41□□□□□ -1.54
CTDNEP1-203ENST00000570385 SMIM12Q96EX1 92 aa5.41□□□□□ -1.54
CTDNEP1-203ENST00000570385 RPP21Q9H633 154 aaKnown RBP5.41□□□□□ -1.54
CTDNEP1-203ENST00000570385 BIN3Q9NQY0 253 aa5.41□□□□□ -1.54
CTDNEP1-203ENST00000570385 A0A096LNI7 61 aa5.4□□□□□ -1.54
CTDNEP1-203ENST00000570385 SDHAF1A6NFY7 115 aa5.4□□□□□ -1.54
CTDNEP1-203ENST00000570385 APCSP02743 223 aa5.4□□□□□ -1.54
CTDNEP1-203ENST00000570385 XCL1P47992 114 aa5.4□□□□□ -1.54
CTDNEP1-203ENST00000570385 GVQW2A0A096LPI5 108 aaPredicted RBP5.39□□□□□ -1.55
CTDNEP1-203ENST00000570385 GAS8-AS1O95177 125 aa5.39□□□□□ -1.55
CTDNEP1-203ENST00000570385 PMCHP20382 165 aa5.39□□□□□ -1.55
CTDNEP1-203ENST00000570385 PRR3P79522 188 aaKnown RBP5.39□□□□□ -1.55
CTDNEP1-203ENST00000570385 FOXI1Q12951 378 aa5.39□□□□□ -1.55
CTDNEP1-203ENST00000570385 EIF5AL1Q6IS14 154 aaKnown RBP5.39□□□□□ -1.55
CTDNEP1-203ENST00000570385 CNFNQ9BYD5 112 aa5.39□□□□□ -1.55
CTDNEP1-203ENST00000570385 TNXBP22105 4242 aa5.39□□□□□ -1.55
CTDNEP1-203ENST00000570385 FAM231BA6NCW3 169 aa5.38□□□□□ -1.55
CTDNEP1-203ENST00000570385 CCL25O15444 150 aa5.38□□□□□ -1.55
CTDNEP1-203ENST00000570385 NCR2O95944 276 aa5.38□□□□□ -1.55
CTDNEP1-203ENST00000570385 CEBPGP53567 150 aa5.38□□□□□ -1.55
CTDNEP1-203ENST00000570385 SMIM15Q7Z3B0 74 aa5.38□□□□□ -1.55
CTDNEP1-203ENST00000570385 BTF3L4Q96K17 158 aa5.38□□□□□ -1.55
CTDNEP1-203ENST00000570385 TMEM242Q9NWH2 141 aa5.38□□□□□ -1.55
CTDNEP1-203ENST00000570385 LRP2P98164 4655 aa5.37□□□□□ -1.55
CTDNEP1-203ENST00000570385 LINC00959A0A1B0GUT2 108 aa5.37□□□□□ -1.55
CTDNEP1-203ENST00000570385 I3L3M4 83 aa5.37□□□□□ -1.55
CTDNEP1-203ENST00000570385 GATCO43716 136 aaKnown RBP5.37□□□□□ -1.55
CTDNEP1-203ENST00000570385 OR5A1Q8NGJ0 315 aa5.37□□□□□ -1.55
CTDNEP1-203ENST00000570385 TMEM101Q96IK0 257 aa5.37□□□□□ -1.55
CTDNEP1-203ENST00000570385 LINC01600Q96MT4 127 aa5.37□□□□□ -1.55
CTDNEP1-203ENST00000570385 H7C423 109 aa5.36□□□□□ -1.55
CTDNEP1-203ENST00000570385 TSHBP01222 138 aa5.36□□□□□ -1.55
CTDNEP1-203ENST00000570385 SLC51BQ86UW2 128 aa5.36□□□□□ -1.55
CTDNEP1-203ENST00000570385 CARD19Q96LW7 228 aa5.36□□□□□ -1.55
CTDNEP1-203ENST00000570385 IGHV1-58A0A0C4DH39 117 aa5.35□□□□□ -1.55
CTDNEP1-203ENST00000570385 A0A0J9YXV3 536 aa5.35□□□□□ -1.55
CTDNEP1-203ENST00000570385 ZNF561-AS1K7EIQ3 104 aa5.35□□□□□ -1.55
CTDNEP1-203ENST00000570385 ESDP10768 282 aa5.35□□□□□ -1.55
CTDNEP1-203ENST00000570385 ZNF25P17030 456 aaPredicted RBP5.35□□□□□ -1.55
CTDNEP1-203ENST00000570385 SYCNQ0VAF6 134 aa5.35□□□□□ -1.55
CTDNEP1-203ENST00000570385 GAGE2BQ13066 116 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms