RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 DNAJC30Q96LL9 226 aa6.9□□□□□ -1.3
RBFOX1-220ENST00000570188 KIR2DL4Q99706 377 aa6.9□□□□□ -1.3
RBFOX1-220ENST00000570188 RETNQ9HD89 108 aa6.9□□□□□ -1.3
RBFOX1-220ENST00000570188 PKD1L1Q8TDX9 2849 aa6.89□□□□□ -1.31
RBFOX1-220ENST00000570188 TRGV4A0A0C4DH28 118 aa6.89□□□□□ -1.31
RBFOX1-220ENST00000570188 TRBV27A0A0K0K1C4 114 aa6.89□□□□□ -1.31
RBFOX1-220ENST00000570188 I3L3M4 83 aa6.89□□□□□ -1.31
RBFOX1-220ENST00000570188 PRB2P02812 416 aaPredicted RBP6.89□□□□□ -1.31
RBFOX1-220ENST00000570188 MAP1LC3CQ9BXW4 147 aa6.89□□□□□ -1.31
RBFOX1-220ENST00000570188 TP53TG1Q9Y2A0 90 aa6.89□□□□□ -1.31
RBFOX1-220ENST00000570188 TRBV10-1A0A0K0K1A3 114 aa6.88□□□□□ -1.31
RBFOX1-220ENST00000570188 SYS1-DBNDD2H3BUS1 97 aa6.88□□□□□ -1.31
RBFOX1-220ENST00000570188 K7EIL1 84 aa6.88□□□□□ -1.31
RBFOX1-220ENST00000570188 PRYO14603 147 aa6.88□□□□□ -1.31
RBFOX1-220ENST00000570188 TSHBP01222 138 aa6.88□□□□□ -1.31
RBFOX1-220ENST00000570188 SLC25A29Q8N8R3 303 aa6.88□□□□□ -1.31
RBFOX1-220ENST00000570188 DEFB104AQ8WTQ1 72 aa6.88□□□□□ -1.31
RBFOX1-220ENST00000570188 C18orf15Q96N68 181 aa6.88□□□□□ -1.31
RBFOX1-220ENST00000570188 H0Y8G0 127 aa6.87□□□□□ -1.31
RBFOX1-220ENST00000570188 DAD1P61803 113 aa6.87□□□□□ -1.31
RBFOX1-220ENST00000570188 RPL36AP83881 106 aaKnown RBP6.87□□□□□ -1.31
RBFOX1-220ENST00000570188 FHL2Q14192 279 aa6.87□□□□□ -1.31
RBFOX1-220ENST00000570188 RHOHQ15669 191 aa6.87□□□□□ -1.31
RBFOX1-220ENST00000570188 C2orf66Q6UXQ4 117 aa6.87□□□□□ -1.31
RBFOX1-220ENST00000570188 Q8N976 141 aa6.87□□□□□ -1.31
RBFOX1-220ENST00000570188 ZNRF2Q8NHG8 242 aa6.87□□□□□ -1.31
RBFOX1-220ENST00000570188 RPL36ALQ969Q0 106 aaKnown RBP6.87□□□□□ -1.31
RBFOX1-220ENST00000570188 IFI27L1Q96BM0 104 aa6.87□□□□□ -1.31
RBFOX1-220ENST00000570188 Q9UF83 564 aa6.87□□□□□ -1.31
RBFOX1-220ENST00000570188 CELA1Q9UNI1 258 aa6.87□□□□□ -1.31
RBFOX1-220ENST00000570188 TRBV6-4A0A1B0GX49 114 aa6.86□□□□□ -1.31
RBFOX1-220ENST00000570188 C20orf202A1L168 122 aa6.86□□□□□ -1.31
RBFOX1-220ENST00000570188 GAGE10A6NGK3 116 aa6.86□□□□□ -1.31
RBFOX1-220ENST00000570188 ATP5LO75964 103 aa6.86□□□□□ -1.31
RBFOX1-220ENST00000570188 SPART-AS1P0CW21 52 aa6.86□□□□□ -1.31
RBFOX1-220ENST00000570188 G0S2P27469 103 aa6.86□□□□□ -1.31
RBFOX1-220ENST00000570188 PET117Q6UWS5 81 aa6.86□□□□□ -1.31
RBFOX1-220ENST00000570188 PHLDA1Q8WV24 401 aaPredicted RBP6.86□□□□□ -1.31
RBFOX1-220ENST00000570188 TOMM6Q96B49 74 aa6.86□□□□□ -1.31
RBFOX1-220ENST00000570188 CYSLTR1Q9Y271 337 aa6.86□□□□□ -1.31
RBFOX1-220ENST00000570188 TRBV7-3A0A075B6L6 115 aa6.85□□□□□ -1.31
RBFOX1-220ENST00000570188 IGHV3-38A0A0C4DH36 116 aa6.85□□□□□ -1.31
RBFOX1-220ENST00000570188 TEX48A0A1B0GUV7 120 aa6.85□□□□□ -1.31
RBFOX1-220ENST00000570188 GAGE12JA6NER3 117 aa6.85□□□□□ -1.31
RBFOX1-220ENST00000570188 GAGE1Q13065 139 aa6.85□□□□□ -1.31
RBFOX1-220ENST00000570188 GAGE4Q13068 117 aa6.85□□□□□ -1.31
RBFOX1-220ENST00000570188 GAGE5Q13069 117 aa6.85□□□□□ -1.31
RBFOX1-220ENST00000570188 DEFB121Q5J5C9 76 aa6.85□□□□□ -1.31
RBFOX1-220ENST00000570188 SPATA12Q7Z6I5 190 aa6.85□□□□□ -1.31
RBFOX1-220ENST00000570188 LINC00476Q8WZB0 136 aa6.85□□□□□ -1.31
RBFOX1-220ENST00000570188 SCGB3A1Q96QR1 104 aa6.85□□□□□ -1.31
RBFOX1-220ENST00000570188 PRADC1Q9BSG0 188 aa6.85□□□□□ -1.31
RBFOX1-220ENST00000570188 LOC100131303A0A0U1RQF7 123 aa6.84□□□□□ -1.31
RBFOX1-220ENST00000570188 LINC01549A6NIU2 74 aa6.84□□□□□ -1.31
RBFOX1-220ENST00000570188 UBE2D3P61077 147 aa6.84□□□□□ -1.31
RBFOX1-220ENST00000570188 UBE2D2P62837 147 aa6.84□□□□□ -1.31
RBFOX1-220ENST00000570188 RPL39P62891 51 aaKnown RBP6.84□□□□□ -1.31
RBFOX1-220ENST00000570188 S100A12P80511 92 aa6.84□□□□□ -1.31
RBFOX1-220ENST00000570188 COTL1Q14019 142 aa6.84□□□□□ -1.31
RBFOX1-220ENST00000570188 SBSPONQ8IVN8 264 aa6.84□□□□□ -1.31
RBFOX1-220ENST00000570188 C11orf68Q9H3H3 251 aaKnown RBP6.84□□□□□ -1.31
RBFOX1-220ENST00000570188 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 ATP5G1P05496 136 aa6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 PRSS1P07477 247 aa6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 CRYBA4P53673 196 aa6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 LINC01545Q5VT33 79 aa6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 Q6ZN92 141 aa6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 TEX43Q6ZNM6 134 aa6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 DAZ4Q86SG3 579 aaKnown RBP6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 ATOH7Q8N100 152 aa6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 C20orf203Q8NBC4 194 aa6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 DAZ3Q9NR90 486 aaKnown RBP6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 PRO0255Q9UI72 69 aa6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 HHLA3Q9XRX5 114 aa6.83□□□□□ -1.32
RBFOX1-220ENST00000570188 HTN3P15516 51 aa6.82□□□□□ -1.32
RBFOX1-220ENST00000570188 LGALS9CQ6DKI2 356 aa6.82□□□□□ -1.32
RBFOX1-220ENST00000570188 ERASQ7Z444 233 aa6.82□□□□□ -1.32
RBFOX1-220ENST00000570188 MRAPQ8TCY5 172 aa6.82□□□□□ -1.32
RBFOX1-220ENST00000570188 PMCHL2Q9BQD1 86 aa6.82□□□□□ -1.32
RBFOX1-220ENST00000570188 CHCHD7Q9BUK0 85 aa6.82□□□□□ -1.32
RBFOX1-220ENST00000570188 VAMP8Q9BV40 100 aa6.82□□□□□ -1.32
RBFOX1-220ENST00000570188 NBEAL2Q6ZNJ1 2754 aa6.82□□□□□ -1.32
RBFOX1-220ENST00000570188 NOTCH1P46531 2555 aa6.81□□□□□ -1.32
RBFOX1-220ENST00000570188 A0A0J9YWU9 116 aa6.81□□□□□ -1.32
RBFOX1-220ENST00000570188 LINC00694P0DN24 101 aa6.81□□□□□ -1.32
RBFOX1-220ENST00000570188 FOXI1Q12951 378 aa6.81□□□□□ -1.32
RBFOX1-220ENST00000570188 TMEM141Q96I45 108 aa6.81□□□□□ -1.32
RBFOX1-220ENST00000570188 TIMM17AQ99595 171 aa6.81□□□□□ -1.32
RBFOX1-220ENST00000570188 TM2D3Q9BRN9 247 aa6.81□□□□□ -1.32
RBFOX1-220ENST00000570188 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.8□□□□□ -1.32
RBFOX1-220ENST00000570188 A0A0J9YY99 117 aa6.8□□□□□ -1.32
RBFOX1-220ENST00000570188 IGKV2-29A2NJV5 120 aaPredicted RBP6.8□□□□□ -1.32
RBFOX1-220ENST00000570188 IGIPA6NJ69 53 aa6.8□□□□□ -1.32
RBFOX1-220ENST00000570188 F5H768 121 aa6.8□□□□□ -1.32
RBFOX1-220ENST00000570188 C12orf74Q32Q52 190 aa6.8□□□□□ -1.32
RBFOX1-220ENST00000570188 BAALCQ8WXS3 180 aa6.8□□□□□ -1.32
RBFOX1-220ENST00000570188 PAM16Q9Y3D7 125 aa6.8□□□□□ -1.32
RBFOX1-220ENST00000570188 HUWE1Q7Z6Z7 4374 aaKnown RBP6.79□□□□□ -1.32
RBFOX1-220ENST00000570188 TRAV9-2A0A087WT02 112 aa6.79□□□□□ -1.32
RBFOX1-220ENST00000570188 TRAV26-1A0A087WT03 109 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms