RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 XGP55808 180 aa8.59□□□□□ -1.03
CNOT1-220ENST00000569916 PEA15Q15121 130 aa8.59□□□□□ -1.03
CNOT1-220ENST00000569916 LINC00528Q8N1L1 170 aa8.59□□□□□ -1.03
CNOT1-220ENST00000569916 DEFB104AQ8WTQ1 72 aa8.59□□□□□ -1.03
CNOT1-220ENST00000569916 BORCS7Q96B45 105 aa8.59□□□□□ -1.03
CNOT1-220ENST00000569916 RPL39LQ96EH5 51 aaKnown RBP8.59□□□□□ -1.03
CNOT1-220ENST00000569916 TMEM243Q9BU79 118 aa8.59□□□□□ -1.03
CNOT1-220ENST00000569916 SMDT1Q9H4I9 107 aa8.59□□□□□ -1.03
CNOT1-220ENST00000569916 PRR34Q9NV39 138 aa8.59□□□□□ -1.03
CNOT1-220ENST00000569916 NAT8Q9UHE5 227 aa8.59□□□□□ -1.03
CNOT1-220ENST00000569916 DNAH8Q96JB1 4490 aa8.59□□□□□ -1.03
CNOT1-220ENST00000569916 ADIRFQ15847 76 aa8.58□□□□□ -1.04
CNOT1-220ENST00000569916 CLPSL2Q6UWE3 100 aa8.58□□□□□ -1.04
CNOT1-220ENST00000569916 C1orf43Q9BWL3 253 aa8.58□□□□□ -1.04
CNOT1-220ENST00000569916 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-220ENST00000569916 COTL1Q14019 142 aa8.57□□□□□ -1.04
CNOT1-220ENST00000569916 MIAQ16674 131 aa8.57□□□□□ -1.04
CNOT1-220ENST00000569916 LINC00269Q8N2A0 174 aa8.57□□□□□ -1.04
CNOT1-220ENST00000569916 C20orf203Q8NBC4 194 aa8.57□□□□□ -1.04
CNOT1-220ENST00000569916 TMEM191AQ9H0A3 160 aa8.57□□□□□ -1.04
CNOT1-220ENST00000569916 AMTP48728 403 aa8.56□□□□□ -1.04
CNOT1-220ENST00000569916 NUP35Q8NFH5 326 aa8.56□□□□□ -1.04
CNOT1-220ENST00000569916 RNF185Q96GF1 192 aa8.56□□□□□ -1.04
CNOT1-220ENST00000569916 IGLV4-60A0A075B6I1 120 aa8.55□□□□□ -1.04
CNOT1-220ENST00000569916 TRBV6-5A0A0K0K1A5 114 aa8.55□□□□□ -1.04
CNOT1-220ENST00000569916 A0A1B0GUV1 79 aa8.55□□□□□ -1.04
CNOT1-220ENST00000569916 SDHAF1A6NFY7 115 aa8.55□□□□□ -1.04
CNOT1-220ENST00000569916 GAS8-AS1O95177 125 aa8.55□□□□□ -1.04
CNOT1-220ENST00000569916 KRTAP26-1Q6PEX3 210 aa8.55□□□□□ -1.04
CNOT1-220ENST00000569916 TMEM70Q9BUB7 260 aa8.55□□□□□ -1.04
CNOT1-220ENST00000569916 SMIM27A0A1W2PRY6 76 aa8.54□□□□□ -1.04
CNOT1-220ENST00000569916 NCR2O95944 276 aa8.54□□□□□ -1.04
CNOT1-220ENST00000569916 HLA-DQA1P01909 254 aa8.54□□□□□ -1.04
CNOT1-220ENST00000569916 RAB4AP20338 218 aa8.54□□□□□ -1.04
CNOT1-220ENST00000569916 REG3AQ06141 175 aa8.54□□□□□ -1.04
CNOT1-220ENST00000569916 RIGQ13278 110 aa8.54□□□□□ -1.04
CNOT1-220ENST00000569916 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
CNOT1-220ENST00000569916 NAT8BQ9UHF3 227 aa8.54□□□□□ -1.04
CNOT1-220ENST00000569916 UBE2L6O14933 153 aa8.53□□□□□ -1.04
CNOT1-220ENST00000569916 RPS10P46783 165 aaKnown RBP8.53□□□□□ -1.04
CNOT1-220ENST00000569916 HAMPP81172 84 aa8.53□□□□□ -1.04
CNOT1-220ENST00000569916 FAM30AQ9NZY2 134 aa8.53□□□□□ -1.04
CNOT1-220ENST00000569916 USP17L23D6RBM5 183 aa8.52□□□□□ -1.05
CNOT1-220ENST00000569916 APCSP02743 223 aa8.52□□□□□ -1.05
CNOT1-220ENST00000569916 MRAP2Q96G30 205 aa8.52□□□□□ -1.05
CNOT1-220ENST00000569916 FAT1Q14517 4588 aa8.52□□□□□ -1.05
CNOT1-220ENST00000569916 IGLV10-54A0A075B6I4 117 aa8.51□□□□□ -1.05
CNOT1-220ENST00000569916 I3L3M4 83 aa8.51□□□□□ -1.05
CNOT1-220ENST00000569916 LINC01620Q4KN68 170 aa8.51□□□□□ -1.05
CNOT1-220ENST00000569916 C14orf177Q52M58 125 aa8.51□□□□□ -1.05
CNOT1-220ENST00000569916 Q6ZSA8 131 aa8.51□□□□□ -1.05
CNOT1-220ENST00000569916 ST20Q9HBF5 79 aa8.51□□□□□ -1.05
CNOT1-220ENST00000569916 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-220ENST00000569916 TRAV8-4A0A0B4J246 113 aa8.5□□□□□ -1.05
CNOT1-220ENST00000569916 IGKV2-29A2NJV5 120 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-220ENST00000569916 EPM2AB3EWF7 344 aa8.5□□□□□ -1.05
CNOT1-220ENST00000569916 SMKR1H3BMG3 65 aa8.5□□□□□ -1.05
CNOT1-220ENST00000569916 H7C423 109 aa8.5□□□□□ -1.05
CNOT1-220ENST00000569916 TSHBP01222 138 aa8.5□□□□□ -1.05
CNOT1-220ENST00000569916 PMCHP20382 165 aa8.5□□□□□ -1.05
CNOT1-220ENST00000569916 POLR2KP53803 58 aaKnown RBP8.5□□□□□ -1.05
CNOT1-220ENST00000569916 TMEM242Q9NWH2 141 aa8.5□□□□□ -1.05
CNOT1-220ENST00000569916 ESDP10768 282 aa8.49□□□□□ -1.05
CNOT1-220ENST00000569916 RAB14P61106 215 aa8.49□□□□□ -1.05
CNOT1-220ENST00000569916 NRACQ8N912 160 aa8.49□□□□□ -1.05
CNOT1-220ENST00000569916 TRBV27A0A0K0K1C4 114 aa8.48□□□□□ -1.05
CNOT1-220ENST00000569916 A0A1B0GW15 77 aa8.48□□□□□ -1.05
CNOT1-220ENST00000569916 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
CNOT1-220ENST00000569916 PRSS1P07477 247 aa8.48□□□□□ -1.05
CNOT1-220ENST00000569916 FGF6P10767 208 aa8.48□□□□□ -1.05
CNOT1-220ENST00000569916 CAMPP49913 170 aa8.48□□□□□ -1.05
CNOT1-220ENST00000569916 MRPL51Q4U2R6 128 aaKnown RBP8.48□□□□□ -1.05
CNOT1-220ENST00000569916 CLLU1Q5K131 121 aa8.48□□□□□ -1.05
CNOT1-220ENST00000569916 Q5VSD8 79 aa8.48□□□□□ -1.05
CNOT1-220ENST00000569916 FAM104BQ5XKR9 115 aa8.48□□□□□ -1.05
CNOT1-220ENST00000569916 AMMECR1LQ6DCA0 310 aa8.48□□□□□ -1.05
CNOT1-220ENST00000569916 RNASEKQ6P5S7 137 aaKnown RBP8.48□□□□□ -1.05
CNOT1-220ENST00000569916 A0A1B0GXF2 115 aa8.47□□□□□ -1.05
CNOT1-220ENST00000569916 ZNF25P17030 456 aaPredicted RBP8.47□□□□□ -1.05
CNOT1-220ENST00000569916 HBBP68871 147 aa8.47□□□□□ -1.05
CNOT1-220ENST00000569916 MRPL54Q6P161 138 aaKnown RBP8.47□□□□□ -1.05
CNOT1-220ENST00000569916 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.05
CNOT1-220ENST00000569916 IGKV3OR2-268A0A0C4DH90 116 aa8.46□□□□□ -1.06
CNOT1-220ENST00000569916 PPP1R17O96001 155 aa8.46□□□□□ -1.06
CNOT1-220ENST00000569916 SUMO2P61956 95 aaKnown RBP8.46□□□□□ -1.06
CNOT1-220ENST00000569916 IFITM2Q01629 132 aa8.46□□□□□ -1.06
CNOT1-220ENST00000569916 LINC00862A6NCI5 91 aa8.45□□□□□ -1.06
CNOT1-220ENST00000569916 PPP1R2P9O14990 202 aa8.45□□□□□ -1.06
CNOT1-220ENST00000569916 PNRC1Q12796 327 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-220ENST00000569916 C7orf77A4D0Y5 90 aa8.44□□□□□ -1.06
CNOT1-220ENST00000569916 GAGE12HA6NDE8 117 aa8.44□□□□□ -1.06
CNOT1-220ENST00000569916 VCYO14598 125 aa8.44□□□□□ -1.06
CNOT1-220ENST00000569916 S100A8P05109 93 aa8.44□□□□□ -1.06
CNOT1-220ENST00000569916 DGAT2L7PQ6IED9 249 aa8.44□□□□□ -1.06
CNOT1-220ENST00000569916 SCXQ7RTU7 201 aa8.44□□□□□ -1.06
CNOT1-220ENST00000569916 MRPL52Q86TS9 123 aaKnown RBP8.44□□□□□ -1.06
CNOT1-220ENST00000569916 CLRN3Q8NCR9 226 aa8.44□□□□□ -1.06
CNOT1-220ENST00000569916 OR5A1Q8NGJ0 315 aa8.44□□□□□ -1.06
CNOT1-220ENST00000569916 TRBV24-1A0A075B6N3 115 aa8.43□□□□□ -1.06
CNOT1-220ENST00000569916 F8W036 122 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms