RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 PKIAP61925 76 aa7.03□□□□□ -1.28
HERPUD1-216ENST00000568814 IQCJQ1A5X6 159 aa7.03□□□□□ -1.28
HERPUD1-216ENST00000568814 TRGC2P03986 189 aa7.02□□□□□ -1.29
HERPUD1-216ENST00000568814 AMTP48728 403 aa7.02□□□□□ -1.29
HERPUD1-216ENST00000568814 Q8N8P6 123 aa7.02□□□□□ -1.29
HERPUD1-216ENST00000568814 LINC00476Q8WZB0 136 aa7.02□□□□□ -1.29
HERPUD1-216ENST00000568814 TMEM243Q9BU79 118 aa7.02□□□□□ -1.29
HERPUD1-216ENST00000568814 HERC2O95714 4834 aa7.02□□□□□ -1.29
HERPUD1-216ENST00000568814 TSHBP01222 138 aa7.01□□□□□ -1.29
HERPUD1-216ENST00000568814 NTM-AS1Q6ZSK4 140 aa7.01□□□□□ -1.29
HERPUD1-216ENST00000568814 PRSS3P2Q8NHM4 247 aa7.01□□□□□ -1.29
HERPUD1-216ENST00000568814 C18orf32Q8TCD1 76 aa7.01□□□□□ -1.29
HERPUD1-216ENST00000568814 CHCHD7Q9BUK0 85 aa7.01□□□□□ -1.29
HERPUD1-216ENST00000568814 IGLV2-18A0A075B6J9 118 aa7□□□□□ -1.29
HERPUD1-216ENST00000568814 LOC389332A0A1B0GUA5 103 aa7□□□□□ -1.29
HERPUD1-216ENST00000568814 H7C423 109 aa7□□□□□ -1.29
HERPUD1-216ENST00000568814 UBE2L6O14933 153 aa7□□□□□ -1.29
HERPUD1-216ENST00000568814 SIVA1O15304 175 aa7□□□□□ -1.29
HERPUD1-216ENST00000568814 RAB5BP61020 215 aa7□□□□□ -1.29
HERPUD1-216ENST00000568814 SMAGPQ0VAQ4 97 aa7□□□□□ -1.29
HERPUD1-216ENST00000568814 ORMDL2Q53FV1 153 aa7□□□□□ -1.29
HERPUD1-216ENST00000568814 TMEM18Q96B42 140 aa7□□□□□ -1.29
HERPUD1-216ENST00000568814 CHCHD5Q9BSY4 110 aa7□□□□□ -1.29
HERPUD1-216ENST00000568814 LYSTQ99698 3801 aa6.99□□□□□ -1.29
HERPUD1-216ENST00000568814 CSMD3Q7Z407 3707 aa6.99□□□□□ -1.29
HERPUD1-216ENST00000568814 K7EP13 123 aa6.99□□□□□ -1.29
HERPUD1-216ENST00000568814 LY6G6CO95867 125 aa6.99□□□□□ -1.29
HERPUD1-216ENST00000568814 ESDP10768 282 aa6.99□□□□□ -1.29
HERPUD1-216ENST00000568814 G0S2P27469 103 aa6.99□□□□□ -1.29
HERPUD1-216ENST00000568814 IFI27P40305 119 aaPredicted RBP6.99□□□□□ -1.29
HERPUD1-216ENST00000568814 FA2HQ7L5A8 372 aa6.99□□□□□ -1.29
HERPUD1-216ENST00000568814 WFDC10BQ8IUB3 73 aa6.99□□□□□ -1.29
HERPUD1-216ENST00000568814 A0A087WX48 190 aa6.98□□□□□ -1.29
HERPUD1-216ENST00000568814 LINC01546A6NGU7 62 aa6.98□□□□□ -1.29
HERPUD1-216ENST00000568814 DNAH10OSP0CZ25 163 aa6.98□□□□□ -1.29
HERPUD1-216ENST00000568814 LAGE3Q14657 143 aa6.98□□□□□ -1.29
HERPUD1-216ENST00000568814 TTC32Q5I0X7 151 aa6.98□□□□□ -1.29
HERPUD1-216ENST00000568814 LINC01556Q5JQF7 62 aa6.98□□□□□ -1.29
HERPUD1-216ENST00000568814 NIT1Q86X76 327 aa6.98□□□□□ -1.29
HERPUD1-216ENST00000568814 Q9H8V8 135 aa6.98□□□□□ -1.29
HERPUD1-216ENST00000568814 AP5S1Q9NUS5 200 aa6.98□□□□□ -1.29
HERPUD1-216ENST00000568814 RYR1P21817 5038 aa6.98□□□□□ -1.29
HERPUD1-216ENST00000568814 TRAV9-2A0A087WT02 112 aa6.97□□□□□ -1.29
HERPUD1-216ENST00000568814 LCE6AA0A183 80 aa6.97□□□□□ -1.29
HERPUD1-216ENST00000568814 LINC01549A6NIU2 74 aa6.97□□□□□ -1.29
HERPUD1-216ENST00000568814 C1orf196B1AJZ1 125 aa6.97□□□□□ -1.29
HERPUD1-216ENST00000568814 TMEM262E9PQX1 116 aa6.97□□□□□ -1.29
HERPUD1-216ENST00000568814 ZNF25P17030 456 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-216ENST00000568814 Q0VG73 95 aa6.97□□□□□ -1.29
HERPUD1-216ENST00000568814 AMMECR1LQ6DCA0 310 aa6.97□□□□□ -1.29
HERPUD1-216ENST00000568814 C10orf126Q8N4M7 172 aa6.97□□□□□ -1.29
HERPUD1-216ENST00000568814 C20orf203Q8NBC4 194 aa6.97□□□□□ -1.29
HERPUD1-216ENST00000568814 DEFB104AQ8WTQ1 72 aa6.97□□□□□ -1.29
HERPUD1-216ENST00000568814 STARD9Q9P2P6 4700 aa6.96□□□□□ -1.29
HERPUD1-216ENST00000568814 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.96□□□□□ -1.3
HERPUD1-216ENST00000568814 A0A1B0GUV1 79 aa6.96□□□□□ -1.3
HERPUD1-216ENST00000568814 IGKV2-29A2NJV5 120 aaPredicted RBP6.96□□□□□ -1.3
HERPUD1-216ENST00000568814 LINC00614P0C842 121 aa6.96□□□□□ -1.3
HERPUD1-216ENST00000568814 GAGE6Q13070 117 aa6.96□□□□□ -1.3
HERPUD1-216ENST00000568814 MRPL52Q86TS9 123 aaKnown RBP6.96□□□□□ -1.3
HERPUD1-216ENST00000568814 BAGE3Q86Y29 109 aa6.96□□□□□ -1.3
HERPUD1-216ENST00000568814 CHCHD1Q96BP2 118 aaKnown RBP6.96□□□□□ -1.3
HERPUD1-216ENST00000568814 TIMM21Q9BVV7 248 aa6.96□□□□□ -1.3
HERPUD1-216ENST00000568814 CYSLTR1Q9Y271 337 aa6.96□□□□□ -1.3
HERPUD1-216ENST00000568814 HIST1H2BKO60814 126 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 HIST1H2BJP06899 126 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 FGF6P10767 208 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 HIST1H2BOP23527 126 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 HIST1H2BBP33778 126 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 HIST1H2BDP58876 126 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 HIST1H2BCP62807 126 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 HIST2H2BEQ16778 126 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 MPV17L2Q567V2 206 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 RNASEKQ6P5S7 137 aaKnown RBP6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 HIST1H2BHQ93079 126 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 TMEM101Q96IK0 257 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 HIST1H2BNQ99877 126 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 HIST1H2BMQ99879 126 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 SPANXA1Q9NS26 97 aa6.95□□□□□ -1.3
HERPUD1-216ENST00000568814 NBDYA0A0U1RRE5 68 aa6.94□□□□□ -1.3
HERPUD1-216ENST00000568814 IGHV3-30P01768 117 aa6.94□□□□□ -1.3
HERPUD1-216ENST00000568814 IGHV3-33P01772 117 aa6.94□□□□□ -1.3
HERPUD1-216ENST00000568814 IGHV3-30-3P0DP02 117 aa6.94□□□□□ -1.3
HERPUD1-216ENST00000568814 IGHV3-30-5P0DP03 117 aa6.94□□□□□ -1.3
HERPUD1-216ENST00000568814 BTF3P20290 206 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-216ENST00000568814 RBX1P62877 108 aa6.94□□□□□ -1.3
HERPUD1-216ENST00000568814 DGAT2L7PQ6IED9 249 aa6.94□□□□□ -1.3
HERPUD1-216ENST00000568814 C2orf66Q6UXQ4 117 aa6.94□□□□□ -1.3
HERPUD1-216ENST00000568814 OR5A1Q8NGJ0 315 aa6.94□□□□□ -1.3
HERPUD1-216ENST00000568814 CSDC2Q9Y534 153 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-216ENST00000568814 NPSP0C0P6 89 aa6.93□□□□□ -1.3
HERPUD1-216ENST00000568814 RPL39P62891 51 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-216ENST00000568814 TOMM6Q96B49 74 aa6.93□□□□□ -1.3
HERPUD1-216ENST00000568814 URB1-AS1Q96HZ7 61 aa6.93□□□□□ -1.3
HERPUD1-216ENST00000568814 UBE2D4Q9Y2X8 147 aa6.93□□□□□ -1.3
HERPUD1-216ENST00000568814 PYGO1Q9Y3Y4 419 aa6.93□□□□□ -1.3
HERPUD1-216ENST00000568814 IBA57-AS1B1ANH7 110 aa6.92□□□□□ -1.3
HERPUD1-216ENST00000568814 HSBP1O75506 76 aa6.92□□□□□ -1.3
HERPUD1-216ENST00000568814 SERF1AO75920 110 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms